Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08073 Davidia involucrata HOM05D000836 ORTHO05D000709 8.2e-44 179.9 83 100.0
Dinv02551 Davidia involucrata HOM05D000836 ORTHO05D000709 5.5e-08 60.8 31 90.3
arahy.Tifrunner.gnm1.ann1.P7DTI4 Arachis hypogaea HOM05D000836 ORTHO05D000709 1.2e-07 59.7 37 75.7
Lj5g0025520 Lotus japonicus HOM05D000836 ORTHO05D000709 1.6e-07 59.3 31 87.1
Hund25689 Selenicereus undatus HOM05D000836 ORTHO05D000709 1.6e-07 59.3 35 77.1
BcaB03g12751 Brassica carinata HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
BcaC01g01014 Brassica carinata HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
BcaNung04517 Brassica carinata HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
A03p61490 Brassica napus HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
A08p18130 Brassica napus HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
C03p87270 Brassica napus HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
C07p59260 Brassica napus HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
BolC3t21028H Brassica oleracea HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
BolC7t46372H Brassica oleracea HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
BraA03t15193Z Brassica rapa HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
BraA08t33765Z Brassica rapa HOM05D000836 ORTHO05D000709 3.6e-07 58.2 31 83.9
Manes.03G065632 Manihot esculenta HOM05D000836 ORTHO05D000709 4.7e-07 57.8 31 83.9
Atru.chr7.2343 Acer truncatum HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Actinidia29313 Actinidia chinensis HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
arahy.Tifrunner.gnm1.ann1.CM6PIJ Arachis hypogaea HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
arahy.Tifrunner.gnm1.ann1.D7T295 Arachis hypogaea HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
arahy.Tifrunner.gnm1.ann1.DPIX5V Arachis hypogaea HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
arahy.Tifrunner.gnm1.ann1.I2WYER Arachis hypogaea HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
CSS0035002 Camellia sinensis var. sinensis HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
CANSAT25G0853 Cannabis sativa HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
CAN.G199.29 Capsicum annuum HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Cpa.g.sc91.27 Carica papaya HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
CiPaw.07G218800 Carya illinoinensis HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
CiPaw.08G014700 Carya illinoinensis HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Ca_12916_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Ciclev10007390m.g Citrus clementina HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
COL.COLO4_24036 Corchorus olitorius HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
DCAR_022868 Daucus carota HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Dinv11591 Davidia involucrata HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Duzib168G0754 Durio zibethinus HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
ECA233G2827 Erigeron canadensis HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
FvH4_2g29940 Fragaria vesca HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
FAN15G1543 Fragaria x ananassa HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
FAN20G0971 Fragaria x ananassa HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
FAN24G1350 Fragaria x ananassa HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
FAN27G3482 Fragaria x ananassa HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Glyma.04G070200 Glycine max HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Glyma.06G072200 Glycine max HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Glyma.14G128300 Glycine max HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Glyma.17G205700 Glycine max HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Gohir.A06G047100 Gossypium hirsutum HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Gohir.A13G206200 Gossypium hirsutum HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Gohir.D06G047400 Gossypium hirsutum HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Gohir.D13G210800 Gossypium hirsutum HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Gorai.010G053000 Gossypium raimondii HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Gorai.013G240700 Gossypium raimondii HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
HanXRQChr08g0234451 Helianthus annuus HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
HanXRQChr13g0402111 Helianthus annuus HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Hma1.2p1_0175F.1_g077110 Hydrangea macrophylla HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Lsat_1_v5_gn_5_32800 Lactuca sativa HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Lj7C714G8 Lonicera japonica HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Lj8A611G44 Lonicera japonica HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Lalb_Chr08g0243861 Lupinus albus HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Lalb_Chr11g0063901 Lupinus albus HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Lalb_Chr23g0268871 Lupinus albus HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
MD08G1139100 Malus domestica HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
MD15G1117100 Malus domestica HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Manes.16G067500 Manihot esculenta HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Medtr1g011610 Medicago truncatula HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Medtr3g107910 Medicago truncatula HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Nitab4.5_0004434g0010 Nicotiana tabacum HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Nitab4.5_0006206g0010 Nicotiana tabacum HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Oeu019424.1 Olea europaea HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Oeu045186.4 Olea europaea HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Peaxi162Scf00545g00213 Petunia axillaris HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Phvul.001G054700 Phaseolus vulgaris HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Phvul.009G096600 Phaseolus vulgaris HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Psat6g030760 Pisum sativum HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Potri.006G248100 Populus trichocarpa HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Potri.018G033300 Populus trichocarpa HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Prupe.1G468400 Prunus persica HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
QL12p031494 Quercus lobata HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Rhsim07G0155800 Rhododendron simsii HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
RcHm_v2.0_Chr6g0312941 Rosa chinensis HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Sabra06G0194100 Salix brachista HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Sabra18G0034300 Salix brachista HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Solyc06g065640.3 Solanum lycopersicum HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Sopen06g024040 Solanum pennellii HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
Thecc.09G146300 Theobroma cacao HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
TPR.G20092 Trifolium pratense HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
TPR.G34692 Trifolium pratense HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
TWI34G1325 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
TWI63G0413 Tripterygium wilfordii HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
VMungo1309G0688 Vigna mungo HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
GSVIVG01035790001 Vitis vinifera HOM05D000836 ORTHO05D000709 6.1e-07 57.4 31 83.9
MSTRG.25865 Avicennia marina HOM05D000836 ORTHO05D000709 8.0e-07 57.0 31 80.6
Actinidia13278 Actinidia chinensis HOM05D000836 ORTHO05D000709 1.0e-06 56.6 31 80.6
Aa31LG4G11740 Aethionema arabicum HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
AT4G32551 Arabidopsis thaliana HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
EL10Ac2g02555 Beta vulgaris HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
Carub.0007s0800 Capsella rubella HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
CARHR240520 Cardamine hirsuta HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
Ca_15707_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
ClCG08G012970 Citrullus lanatus HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
Cc11_g01340 Coffea canephora HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
MELO3C011220.2 Cucumis melo HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
CsaV3_2G031700 Cucumis sativus L. HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
ECA246G4130 Erigeron canadensis HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
Migut.A00286 Erythranthe guttata HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
Thhalv10024343m.g Eutrema salsugineum HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
Hma1.2p1_0320F.1_g123965 Hydrangea macrophylla HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
Oeu034204.1 Olea europaea HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
PGR044G1421 Punica granatum HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
Sed0026236 Sechium edule HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
Sc09g0008770 Simmondsia chinensis HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
THA.LOC104803821 Tarenaya hassleriana HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
THA.LOC104819886 Tarenaya hassleriana HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
unitig_32.g11669 Utricularia gibba HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
unitig_748.g7364 Utricularia gibba HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
VMungo0647G2037 Vigna mungo HOM05D000836 ORTHO05D000709 1.4e-06 56.2 31 80.6
Duzib150G1049 Durio zibethinus HOM05D000836 ORTHO05D000709 1.8e-06 55.8 31 80.6
Psat5g028200 Pisum sativum HOM05D000836 ORTHO05D000709 1.8e-06 55.8 31 80.6
Lsat_1_v5_gn_6_22840 Lactuca sativa HOM05D000836 ORTHO05D000709 2.3e-06 55.5 31 80.6
SHI18602 Sapria himalayana HOM05D000836 ORTHO05D000709 2.3e-06 55.5 31 80.6
Ah.12g063550 Amaranthus hybridus HOM05D000836 ORTHO05D000709 3.0e-06 55.1 31 77.4
Lj1g0000004 Lotus japonicus HOM05D000836 ORTHO05D000709 3.0e-06 55.1 31 77.4
AUR62032365 Chenopodium quinoa HOM05D000836 ORTHO05D000709 4.0e-06 54.7 31 77.4
SalBow4G2250 Salvia bowleyana HOM05D000836 ORTHO05D000709 4.0e-06 54.7 31 77.4
Sp7g30330 Schrenkiella parvula HOM05D000836 ORTHO05D000709 4.0e-06 54.7 31 77.4
ATR0083G002 Amborella trichopoda HOM05D000836 ORTHO05D000709 5.2e-06 54.3 31 77.4
AL7G19210 Arabidopsis lyrata HOM05D000836 ORTHO05D000709 5.2e-06 54.3 31 77.4
PSO017G2278 Papaver somniferum HOM05D000836 ORTHO05D000709 5.2e-06 54.3 31 77.4
PSO170G5802 Papaver somniferum HOM05D000836 ORTHO05D000709 5.2e-06 54.3 31 77.4
TAR383G0983 Trochodendron aralioides HOM05D000836 ORTHO05D000709 5.2e-06 54.3 31 77.4
TAR625G0142 Trochodendron aralioides HOM05D000836 ORTHO05D000709 5.2e-06 54.3 31 77.4
TAR626G1454 Trochodendron aralioides HOM05D000836 ORTHO05D000709 5.2e-06 54.3 31 77.4
BcaC09g52046 Brassica carinata HOM05D000836 ORTHO05D000709 8.8e-06 53.5 31 74.2
A01p05840 Brassica napus HOM05D000836 ORTHO05D000709 8.8e-06 53.5 31 74.2
C01p06410 Brassica napus HOM05D000836 ORTHO05D000709 8.8e-06 53.5 31 74.2
BolC1t00637H Brassica oleracea HOM05D000836 ORTHO05D000709 8.8e-06 53.5 31 74.2
BraA01t00552Z Brassica rapa HOM05D000836 ORTHO05D000709 8.8e-06 53.5 31 74.2
Eucgr.C02838 Eucalyptus grandis HOM05D000836 ORTHO05D000709 8.8e-06 53.5 31 77.4
MBI04_g08377_MAGBIO Magnolia biondii HOM05D000836 ORTHO05D000709 8.8e-06 53.5 31 77.4


User provided reference genes

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