Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 2.5e-116 422.5 283 100.0
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 2.8e-35 153.3 144 61.1
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 2.0e-25 120.6 167 47.3
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 6.5e-24 115.5 172 45.3
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 8.4e-24 115.2 147 47.6
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 1.1e-23 114.8 169 47.9
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 9.3e-23 111.7 180 42.8
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 2.1e-22 110.5 167 44.3
Dinv17952 Davidia involucrata HOM05D007935 ORTHO05D007393 2.7e-22 110.2 71 91.5
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 1.8e-21 107.5 169 45.0
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 2.3e-21 107.1 158 44.9
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 5.1e-21 105.9 161 45.3
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 5.1e-21 105.9 149 46.3
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 8.7e-21 105.1 149 45.6
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 3.3e-20 103.2 156 45.5
Dinv20743 Davidia involucrata HOM05D011313 ORTHO05D010661 3.3e-20 103.2 61 85.2
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 4.3e-20 102.8 171 45.6
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 2.2e-19 100.5 151 45.7
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 4.8e-19 99.4 155 45.8
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 4.8e-19 99.4 173 41.6
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 1.1e-18 98.2 177 42.4
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.4e-18 97.8 160 40.6
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 3.1e-18 96.7 175 42.9
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 3.1e-18 96.7 177 40.1
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 4.1e-18 96.3 192 38.5
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 2.0e-17 94.0 175 41.7
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 3.4e-17 93.2 169 41.4
Dinv20055 Davidia involucrata HOM05D000355 ORTHO05D000227 5.9e-17 92.4 45 100.0
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 5.9e-17 92.4 151 41.7
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 7.7e-17 92.0 177 42.4
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 1.0e-16 91.7 142 40.8
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 2.2e-16 90.5 168 40.5
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 3.8e-16 89.7 168 41.1
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 8.5e-16 88.6 150 40.0
Lj4P507T35 Lonicera japonica HOM05D007935 ORTHO05D007393 8.5e-16 88.6 111 48.6
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 8.5e-16 88.6 169 33.7
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.1e-15 88.2 160 39.4
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 1.4e-15 87.8 158 38.0
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 4.2e-15 86.3 158 39.2
Lj4P515T30 Lonicera japonica HOM05D007935 ORTHO05D007393 4.2e-15 86.3 111 47.7
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 9.4e-15 85.1 161 38.5
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 9.4e-15 85.1 159 35.8
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 1.2e-14 84.7 158 39.9
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 1.2e-14 84.7 181 40.3
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 2.7e-14 83.6 158 36.1
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 7.9e-14 82.0 150 42.7
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 7.9e-14 82.0 146 41.8
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 1.0e-13 81.6 174 37.4
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 1.0e-13 81.6 170 40.6
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 1.8e-13 80.9 169 39.6
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 1.8e-13 80.9 170 40.6
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 1.8e-13 80.9 155 36.1
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 2.3e-13 80.5 158 36.7
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 2.3e-13 80.5 157 36.9
Haze_19351 Corylus avellana HOM05D009958 ORTHO05D007393 8.8e-13 78.6 171 40.9
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 1.1e-12 78.2 165 38.2
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 1.1e-12 78.2 165 38.2
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 2.0e-12 77.4 156 37.8
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 5.7e-12 75.9 153 35.9
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 7.4e-12 75.5 152 36.8
CARHR064730 Cardamine hirsuta HOM05D010479 ORTHO05D007393 2.2e-11 73.9 167 35.3
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 2.8e-11 73.6 154 34.4
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 2.8e-11 73.6 162 37.0
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 6.3e-11 72.4 141 41.8
Phvul.007G090200 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.1e-10 71.6 147 38.1
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 1.4e-10 71.2 150 37.3
Sp5g26980 Schrenkiella parvula HOM05D010479 ORTHO05D007393 1.8e-10 70.9 166 34.9
Cfa020918 Carpinus fangiana HOM05D009958 ORTHO05D007393 2.4e-10 70.5 171 40.4
Psat6g186560 Pisum sativum HOM05D007935 ORTHO05D007393 3.1e-10 70.1 156 39.7
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 5.3e-10 69.3 154 33.1
SGA_v2.0_scaffold118G32471 Striga asiatica HOM05D007935 ORTHO05D007393 9.1e-10 68.6 146 36.3
AT1G71910 Arabidopsis thaliana HOM05D010479 ORTHO05D007393 1.2e-09 68.2 164 34.1
BcaC08g46627 Brassica carinata HOM05D010479 ORTHO05D007393 2.0e-09 67.4 165 33.3
AL2G31520 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 2.6e-09 67.0 163 35.0
BolC6t39652H Brassica oleracea HOM05D010479 ORTHO05D007393 5.9e-09 65.9 165 32.7
C06p35260 Brassica napus HOM05D001833 ORTHO05D001776 7.7e-09 65.5 158 35.4
Thhalv10019217m.g Eutrema salsugineum HOM05D010479 ORTHO05D007393 7.7e-09 65.5 170 35.9
BraA07t30685Z Brassica rapa HOM05D001833 ORTHO05D001776 1.0e-08 65.1 164 34.1
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 1.0e-08 65.1 157 35.0
Hma1.2p1_0091F.1_g046420 Hydrangea macrophylla HOM05D000355 ORTHO05D000227 1.3e-08 64.7 36 77.8
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 1.7e-08 64.3 170 33.5
FAN24G0793 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.7e-08 64.3 101 42.6
Carub.0002s1869 Capsella rubella HOM05D010479 ORTHO05D007393 2.2e-08 63.9 170 31.2
MELO3C008117.2 Cucumis melo HOM05D030816 ORTHO05D028878 2.2e-08 63.9 154 34.4
Migut.N03344 Erythranthe guttata HOM05D007935 ORTHO05D007393 2.2e-08 63.9 149 31.5
CsaV3_2G033460 Cucumis sativus L. HOM05D030816 ORTHO05D028878 2.9e-08 63.5 154 37.0
Thecc.01G147200 Theobroma cacao HOM05D009958 ORTHO05D007393 3.8e-08 63.2 169 32.5
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 5.0e-08 62.8 177 32.8
THA.LOC104810516 Tarenaya hassleriana HOM05D010479 ORTHO05D007393 5.0e-08 62.8 156 35.3
A07p30490 Brassica napus HOM05D001833 ORTHO05D001776 6.5e-08 62.4 165 33.3
BraA07t31373Z Brassica rapa HOM05D010479 ORTHO05D007393 6.5e-08 62.4 165 32.7
Manes.13G153300 Manihot esculenta HOM05D009958 ORTHO05D007393 1.1e-07 61.6 145 35.2
Nn1g07141 Nelumbo nucifera HOM05D000355 ORTHO05D000227 1.4e-07 61.2 45 57.8
VMungo0464G1609 Vigna mungo HOM05D007935 ORTHO05D007393 1.4e-07 61.2 165 30.3
BcaB03g14909 Brassica carinata HOM05D010479 ORTHO05D007393 1.9e-07 60.8 165 32.7
BcaB03g14911 Brassica carinata HOM05D010479 ORTHO05D007393 1.9e-07 60.8 165 32.7
C06p45990 Brassica napus HOM05D004678 ORTHO05D005880 2.5e-07 60.5 161 32.3
BcaC03g15309 Brassica carinata HOM05D010479 ORTHO05D007393 3.2e-07 60.1 165 33.3
BolC2t08970H Brassica oleracea HOM05D010479 ORTHO05D007393 3.2e-07 60.1 165 33.3
arahy.Tifrunner.gnm1.ann1.DLN685 Arachis hypogaea HOM05D007935 ORTHO05D007393 4.2e-07 59.7 163 35.0
Duzib264G0789 Durio zibethinus HOM05D009958 ORTHO05D007393 5.5e-07 59.3 175 31.4
TAR626G1504 Trochodendron aralioides HOM05D000355 ORTHO05D000227 1.2e-06 58.2 45 60.0
ClCG11G008210 Citrullus lanatus HOM05D030816 ORTHO05D028878 2.1e-06 57.4 76 44.7
Sc23g0001170 Simmondsia chinensis HOM05D007935 ORTHO05D007393 2.1e-06 57.4 123 38.2
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 4.7e-06 56.2 189 31.7
Oeu052900.1 Olea europaea HOM05D009958 ORTHO05D007393 4.7e-06 56.2 154 32.5
C02p29210 Brassica napus HOM05D004678 ORTHO05D005880 6.1e-06 55.8 154 34.4
FAN20G0410 Fragaria x ananassa HOM05D007935 ORTHO05D007393 6.1e-06 55.8 127 37.0
A07p38090 Brassica napus HOM05D004678 ORTHO05D005880 7.9e-06 55.5 156 32.7
Manes.16G006800 Manihot esculenta HOM05D000355 ORTHO05D000227 7.9e-06 55.5 49 55.1


User provided reference genes

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