Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07989 Davidia involucrata HOM05D009197 ORTHO05D010857 2.6e-68 261.9 133 100.0
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 2.0e-36 156.0 121 68.6
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 2.9e-35 152.1 120 70.8
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 6.3e-30 134.4 120 62.5
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 3.1e-29 132.1 119 60.5
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 1.2e-25 120.2 119 58.8
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 2.7e-25 119.0 113 60.2
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 4.7e-25 118.2 119 55.5
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 1.4e-24 116.7 120 55.8
Sabra15G0093200 Salix brachista HOM05D009197 ORTHO05D010857 3.0e-24 115.5 121 50.4
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 1.7e-22 109.8 122 55.7
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 6.3e-22 107.8 122 54.9
Atru.chr9.2375 Acer truncatum HOM05D009197 ORTHO05D010857 8.3e-22 107.5 119 56.3
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 1.1e-21 107.1 119 52.1
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 1.8e-21 106.3 114 53.5
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 3.1e-21 105.5 119 55.5
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 3.1e-21 105.5 119 55.5
TAR371G0864 Trochodendron aralioides HOM05D009197 ORTHO05D010857 2.7e-20 102.4 124 50.0
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 3.5e-20 102.1 120 55.0
Rhsim08G0163700 Rhododendron simsii HOM05D009197 ORTHO05D010857 4.5e-20 101.7 126 56.3
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 1.0e-19 100.5 124 51.6
CSS0023152 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 2.5e-18 95.9 119 49.6
PGSC0003DMG400033096 Solanum tuberosum HOM05D009197 ORTHO05D010857 3.6e-17 92.0 103 52.4
QL03p067559 Quercus lobata HOM05D009197 ORTHO05D010857 4.0e-16 88.6 110 48.2
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 5.7e-15 84.7 116 50.9
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 5.7e-15 84.7 116 50.9
Ciclev10022789m.g Citrus clementina HOM05D009197 ORTHO05D010857 2.8e-14 82.4 120 46.7
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 1.8e-13 79.7 116 50.0
Aqoxy3G03174 Aquilegia oxysepala HOM05D009197 ORTHO05D010857 2.4e-13 79.3 121 43.8
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 7.0e-13 77.8 122 43.4
QL03p067585 Quercus lobata HOM05D009197 ORTHO05D010857 7.0e-13 77.8 110 45.5
Duzib205G1360 Durio zibethinus HOM05D009197 ORTHO05D010857 2.7e-12 75.9 96 47.9
Gohir.D03G089850 Gossypium hirsutum HOM05D009197 ORTHO05D010857 2.3e-11 72.8 112 45.5
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 1.2e-09 67.0 129 39.5
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 2.8e-09 65.9 133 37.6
Nn4g22968 Nelumbo nucifera HOM05D009197 ORTHO05D010857 3.6e-09 65.5 124 41.1
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 3.6e-09 65.5 127 37.8
VMungo1215G2054 Vigna mungo HOM05D013104 ORTHO05D010857 2.3e-08 62.8 115 37.4
Glyma.05G032100 Glycine max HOM05D013104 ORTHO05D010857 2.6e-07 59.3 131 36.6
Sed0020424 Sechium edule HOM05D022550 ORTHO05D025091 2.6e-07 59.3 120 42.5
ClCG01G014220 Citrullus lanatus HOM05D022550 ORTHO05D025091 4.4e-07 58.5 143 35.0
Psat4g054920 Pisum sativum HOM05D013104 ORTHO05D010857 4.4e-07 58.5 136 35.3
Sed0012922 Sechium edule HOM05D022550 ORTHO05D025091 7.5e-07 57.8 135 37.8
MELO3C002227.2 Cucumis melo HOM05D022550 ORTHO05D025091 9.8e-07 57.4 144 34.0
Manes.06G099001 Manihot esculenta HOM05D009197 ORTHO05D010857 1.7e-06 56.6 90 37.8
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 1.7e-06 56.6 130 37.7
ECA246G1381 Erigeron canadensis HOM05D009197 ORTHO05D010857 2.2e-06 56.2 105 38.1
Glyma.17G094600 Glycine max HOM05D013104 ORTHO05D010857 4.9e-06 55.1 131 35.9


User provided reference genes

Program Settings