Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07880 Davidia involucrata HOM05D007202 ORTHO05D009125 2.4e-108 396.0 279 100.0
Dinv07882 Davidia involucrata HOM05D007202 ORTHO05D009125 4.7e-35 152.5 110 74.5
QL03p045855 Quercus lobata HOM05D007202 ORTHO05D009125 4.6e-30 136.0 191 43.5
TAR622G0387 Trochodendron aralioides HOM05D007202 ORTHO05D009125 2.1e-27 127.1 174 42.5
Lj3C848G3 Lonicera japonica HOM05D007202 ORTHO05D009125 5.4e-23 112.5 155 43.2
Actinidia21102 Actinidia chinensis HOM05D007202 ORTHO05D009125 7.8e-22 108.6 112 50.9
QL12p025863 Quercus lobata HOM05D007202 ORTHO05D009125 1.0e-21 108.2 110 50.9
Oeu037581.1 Olea europaea HOM05D007202 ORTHO05D009125 1.3e-21 107.8 166 48.8
Hma1.2p1_2428F.1_g321970 Hydrangea macrophylla HOM05D007202 ORTHO05D009125 1.7e-21 107.5 110 54.5
GSVIVG01026178001 Vitis vinifera HOM05D007202 ORTHO05D009125 1.5e-20 104.4 116 50.0
Psat6g233440 Pisum sativum HOM05D007202 ORTHO05D009125 6.2e-19 99.0 167 35.3
Prupe.7G271800 Prunus persica HOM05D007202 ORTHO05D009125 1.4e-18 97.8 116 45.7
CSS0032654 Camellia sinensis var. sinensis HOM05D007202 ORTHO05D009125 9.9e-17 91.7 113 48.7
CSS0048316 Camellia sinensis var. sinensis HOM05D007202 ORTHO05D009125 9.9e-17 91.7 113 48.7
Peaxi162Scf00681g00018 Petunia axillaris HOM05D007202 ORTHO05D009125 9.9e-17 91.7 137 41.6
vmacro08165 Vaccinium macrocarpon HOM05D007202 ORTHO05D009125 1.3e-16 91.3 112 47.3
Haze_11774 Corylus avellana HOM05D007202 ORTHO05D009125 3.7e-16 89.7 118 46.6
Potri.005G090600 Populus trichocarpa HOM05D007202 ORTHO05D009125 4.9e-16 89.4 116 43.1
Sopen04g004350 Solanum pennellii HOM05D007202 ORTHO05D009125 4.9e-16 89.4 116 44.0
Sabra05G0074700 Salix brachista HOM05D007202 ORTHO05D009125 1.1e-15 88.2 116 44.0
Nitab4.5_0009973g0040 Nicotiana tabacum HOM05D007202 ORTHO05D009125 4.1e-15 86.3 116 44.0
Solyc04g009220.2 Solanum lycopersicum HOM05D007202 ORTHO05D009125 9.2e-15 85.1 116 42.2
Cfa008759 Carpinus fangiana HOM05D007202 ORTHO05D009125 1.2e-14 84.7 118 46.6
Aqoxy6G00861 Aquilegia oxysepala HOM05D007202 ORTHO05D009125 3.5e-14 83.2 111 43.2
Nitab4.5_0006691g0020 Nicotiana tabacum HOM05D007202 ORTHO05D009125 6.0e-14 82.4 116 42.2
Migut.I00254 Erythranthe guttata HOM05D007202 ORTHO05D009125 1.0e-13 81.6 173 35.8
Nn7g37484 Nelumbo nucifera HOM05D007202 ORTHO05D009125 1.0e-13 81.6 111 43.2
PGSC0003DMG400032545 Solanum tuberosum HOM05D007202 ORTHO05D009125 3.9e-13 79.7 116 41.4
Atru.chr11.1126 Acer truncatum HOM05D007202 ORTHO05D009125 6.6e-13 79.0 112 40.2
DCAR_026889 Daucus carota HOM05D007202 ORTHO05D009125 1.1e-12 78.2 112 38.4
Duzib132G0783 Durio zibethinus HOM05D007202 ORTHO05D009125 1.1e-12 78.2 110 40.0
FAN12G2678 Fragaria x ananassa HOM05D007202 ORTHO05D009125 1.1e-12 78.2 115 43.5
Lalb_Chr02g0143591 Lupinus albus HOM05D007202 ORTHO05D009125 1.1e-12 78.2 109 36.7
FvH4_4g11722 Fragaria vesca HOM05D007202 ORTHO05D009125 3.3e-12 76.6 115 42.6
FvH4_4g11723 Fragaria vesca HOM05D007202 ORTHO05D009125 3.3e-12 76.6 115 42.6
FAN12G3533 Fragaria x ananassa HOM05D007202 ORTHO05D009125 3.3e-12 76.6 115 42.6
Eucgr.J00877 Eucalyptus grandis HOM05D007202 ORTHO05D009125 4.3e-12 76.3 116 38.8
Cc07_g16390 Coffea canephora HOM05D007202 ORTHO05D009125 5.6e-12 75.9 112 40.2
FAN07G0522 Fragaria x ananassa HOM05D007202 ORTHO05D009125 7.3e-12 75.5 115 42.6
RcHm_v2.0_Chr4g0408911 Rosa chinensis HOM05D007202 ORTHO05D009125 7.3e-12 75.5 112 43.8
MSTRG.22930 Avicennia marina HOM05D007202 ORTHO05D009125 9.5e-12 75.1 173 34.1
Ciclev10030697m.g Citrus clementina HOM05D007202 ORTHO05D009125 1.2e-11 74.7 116 41.4
Medtr1g114190 Medicago truncatula HOM05D000730 ORTHO05D009125 1.2e-11 74.7 170 29.4
Lj5g0012863 Lotus japonicus HOM05D007202 ORTHO05D009125 2.1e-11 73.9 109 35.8
MBI07_g03828_MAGBIO Magnolia biondii HOM05D007202 ORTHO05D009125 2.1e-11 73.9 112 37.5
TWI53G0827 Tripterygium wilfordii HOM05D007202 ORTHO05D009125 6.2e-11 72.4 117 36.8
CAN.G619.3 Capsicum annuum HOM05D007202 ORTHO05D009125 8.1e-11 72.0 116 38.8
Hund26048 Selenicereus undatus HOM05D007202 ORTHO05D009125 8.1e-11 72.0 110 37.3
TPR.G4127 Trifolium pratense HOM05D007202 ORTHO05D009125 1.4e-10 71.2 170 27.6
Thecc.02G157500 Theobroma cacao HOM05D007202 ORTHO05D009125 1.8e-10 70.9 111 38.7
arahy.Tifrunner.gnm1.ann1.EU7MKH Arachis hypogaea HOM05D007202 ORTHO05D009125 4.0e-10 69.7 109 33.0
arahy.Tifrunner.gnm1.ann1.U9PBTF Arachis hypogaea HOM05D007202 ORTHO05D009125 4.0e-10 69.7 109 33.0
PSO063G1738 Papaver somniferum HOM05D007202 ORTHO05D009125 5.2e-10 69.3 112 34.8
Sed0015759 Sechium edule HOM05D007202 ORTHO05D009125 5.2e-10 69.3 118 37.3
Sc10g0006710 Simmondsia chinensis HOM05D007202 ORTHO05D009125 5.2e-10 69.3 116 35.3
SGA_v2.0_scaffold102G29846 Striga asiatica HOM05D007202 ORTHO05D009125 1.2e-09 68.2 173 32.9
THA.LOC104800801 Tarenaya hassleriana HOM05D007202 ORTHO05D009125 1.2e-09 68.2 117 34.2
CiPaw.06G061800 Carya illinoinensis HOM05D007202 ORTHO05D009125 1.5e-09 67.8 112 38.4
COL.COLO4_33057 Corchorus olitorius HOM05D007202 ORTHO05D009125 1.5e-09 67.8 117 37.6
Gohir.A03G165700 Gossypium hirsutum HOM05D007202 ORTHO05D009125 1.5e-09 67.8 116 33.6
PSO782G4392 Papaver somniferum HOM05D007202 ORTHO05D009125 1.5e-09 67.8 112 33.9
Gorai.005G211700 Gossypium raimondii HOM05D007202 ORTHO05D009125 2.0e-09 67.4 116 33.6
Manes.10G042000 Manihot esculenta HOM05D007202 ORTHO05D009125 2.0e-09 67.4 110 34.5
ATR0712G074 Amborella trichopoda HOM05D007202 ORTHO05D009125 3.4e-09 66.6 94 39.4
Gohir.D02G188900 Gossypium hirsutum HOM05D007202 ORTHO05D009125 5.8e-09 65.9 116 32.8
ClCG01G011340 Citrullus lanatus HOM05D007202 ORTHO05D009125 1.7e-08 64.3 120 38.3
Ca_11225_v3 Cicer arietinum L. HOM05D007202 ORTHO05D009125 2.2e-08 63.9 166 27.1
CANSAT54G1393 Cannabis sativa HOM05D007202 ORTHO05D009125 2.9e-08 63.5 112 33.9
EL10Ac9g22973 Beta vulgaris HOM05D007202 ORTHO05D009125 6.4e-08 62.4 76 42.1
ECA233G0992 Erigeron canadensis HOM05D000200 ORTHO05D001546 1.1e-07 61.6 173 27.7
PGR142G1500 Punica granatum HOM05D007202 ORTHO05D009125 5.4e-07 59.3 112 31.2
AUR62017720 Chenopodium quinoa HOM05D007202 ORTHO05D009125 1.2e-06 58.2 109 33.9
Rhsim09G0070400 Rhododendron simsii HOM05D007202 ORTHO05D009125 1.6e-06 57.8 114 34.2
SalBow5G3041 Salvia bowleyana HOM05D007202 ORTHO05D009125 1.6e-06 57.8 176 33.0
Carub.0006s0720 Capsella rubella HOM05D007202 ORTHO05D009125 2.7e-06 57.0 117 30.8
Ah.03g147890 Amaranthus hybridus HOM05D007202 ORTHO05D009125 3.5e-06 56.6 173 27.7
AL6G18720 Arabidopsis lyrata HOM05D007202 ORTHO05D009125 3.5e-06 56.6 117 29.9
CARHR204810 Cardamine hirsuta HOM05D007202 ORTHO05D009125 3.5e-06 56.6 117 29.9
Phvul.007G015700 Phaseolus vulgaris HOM05D007202 ORTHO05D009125 3.5e-06 56.6 107 32.7
HanXRQChr13g0392131 Helianthus annuus HOM05D007202 ORTHO05D009125 4.6e-06 56.2 112 31.2
VMungo0720G1420 Vigna mungo HOM05D007202 ORTHO05D009125 6.0e-06 55.8 107 32.7
PSO017G1665 Papaver somniferum HOM05D015807 ORTHO05D011376 7.8e-06 55.5 135 27.4


User provided reference genes

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