Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 2.4e-273 944.9 479 100.0
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 4.2e-217 758.1 501 78.4
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 2.6e-206 722.2 507 76.3
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 1.7e-205 719.5 506 76.1
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.2e-203 713.4 508 74.0
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 2.9e-202 708.8 514 71.6
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 2.3e-199 699.1 510 74.3
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 2.0e-198 696.0 504 74.2
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 2.2e-197 692.6 515 73.0
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 8.2e-197 690.6 513 73.1
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 3.5e-195 685.3 512 72.5
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 5.9e-195 684.5 512 72.5
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 6.5e-194 681.0 512 71.9
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 6.5e-194 681.0 509 70.9
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 4.2e-193 678.3 514 71.8
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 5.5e-193 677.9 511 73.2
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 3.6e-192 675.2 509 72.1
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 2.3e-191 672.5 517 70.4
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 3.0e-191 672.2 514 71.6
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 3.0e-191 672.2 514 71.8
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 4.0e-191 671.8 514 72.0
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 6.8e-191 671.0 512 71.3
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 9.8e-190 667.2 516 71.5
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 2.8e-189 665.6 515 70.1
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 3.7e-189 665.2 506 72.9
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 4.8e-189 664.8 507 71.0
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 4.8e-189 664.8 516 71.9
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 6.3e-189 664.5 505 72.3
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 6.3e-189 664.5 507 72.0
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 8.3e-189 664.1 516 71.7
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 2.4e-188 662.5 516 71.5
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 3.1e-188 662.1 517 69.2
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 3.5e-187 658.7 515 70.7
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 1.3e-186 656.8 515 70.3
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 1.7e-186 656.4 521 70.1
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 1.5e-185 653.3 511 69.9
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 2.5e-185 652.5 513 70.8
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 1.6e-184 649.8 517 69.2
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 2.7e-184 649.0 509 70.3
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 2.7e-184 649.0 509 70.1
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 3.6e-184 648.7 518 69.1
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 1.4e-183 646.7 513 70.2
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 1.8e-183 646.4 507 70.4
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 5.2e-183 644.8 502 70.1
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 3.4e-182 642.1 503 69.8
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 2.8e-181 639.0 457 72.4
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 3.7e-181 638.6 523 67.9
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 3.7e-181 638.6 511 68.9
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 8.3e-181 637.5 516 67.1
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 8.3e-181 637.5 523 67.1
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 1.2e-179 633.6 511 66.5
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 2.0e-179 632.9 509 69.0
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 2.0e-179 632.9 516 67.1
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 7.7e-179 630.9 507 69.0
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 1.0e-178 630.6 509 68.6
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 1.3e-178 630.2 518 68.0
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 2.3e-178 629.4 483 72.7
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 2.3e-178 629.4 508 67.9
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 2.3e-178 629.4 510 66.7
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 3.8e-178 628.6 507 68.6
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 6.6e-178 627.9 536 67.5
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 2.8e-176 622.5 508 67.9
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 4.7e-176 621.7 519 67.2
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 4.0e-175 618.6 507 67.3
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 8.9e-175 617.5 514 64.8
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 8.9e-175 617.5 509 67.0
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.0e-174 616.3 509 67.0
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.6e-174 615.9 508 66.9
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 4.4e-174 615.1 506 67.6
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 9.8e-174 614.0 509 66.8
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 2.2e-173 612.8 510 67.1
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 3.7e-173 612.1 509 66.8
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 6.3e-173 611.3 514 66.5
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 3.2e-172 609.0 513 66.7
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 9.2e-172 607.4 464 70.9
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 3.5e-171 605.5 505 65.1
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 3.5e-171 605.5 504 66.1
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 5.9e-171 604.7 512 66.8
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 5.9e-171 604.7 508 66.7
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 7.8e-171 604.4 519 64.4
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 3.3e-169 599.0 506 64.8
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 9.5e-169 597.4 504 64.9
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 1.0e-167 594.0 522 65.5
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 1.8e-167 593.2 527 65.3
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 6.8e-167 591.3 517 65.4
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 1.7e-165 586.6 510 63.9
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 5.4e-164 581.6 512 63.7
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 7.0e-164 581.3 517 65.4
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 1.2e-163 580.5 525 63.0
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 4.6e-163 578.6 503 64.4
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 3.6e-160 568.9 449 69.3
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 1.5e-158 563.5 499 61.9
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 2.0e-158 563.1 520 63.3
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 4.4e-158 562.0 529 61.2
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 1.4e-156 557.0 503 63.0
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 1.9e-156 556.6 501 63.1
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 1.2e-155 553.9 503 63.0
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 1.6e-155 553.5 529 60.9
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 6.0e-155 551.6 500 63.4
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 1.0e-154 550.8 500 63.8
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 2.3e-154 549.7 502 63.1
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 8.6e-154 547.7 498 63.1
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 1.9e-153 546.6 498 62.9
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 1.7e-146 523.5 524 59.0
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 2.8e-144 516.2 516 57.6
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 3.9e-138 495.7 508 57.9
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 1.9e-137 493.4 508 57.9
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 9.6e-137 491.1 507 57.6
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 2.8e-136 489.6 472 60.0
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 2.7e-123 446.4 534 50.9
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 4.8e-120 435.6 499 53.7
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 5.1e-114 415.6 503 51.9
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 1.6e-112 410.6 540 48.1
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 3.4e-110 402.9 528 49.4
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 4.3e-105 386.0 305 65.9
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 9.7e-105 384.8 287 72.5
SMO347G0414 Selaginella moellendorffii HOM05D005917 ORTHO05D007517 2.7e-99 366.7 510 45.5
Migut.L01336 Erythranthe guttata HOM05D005917 ORTHO05D007517 2.6e-89 333.6 494 47.4
CBR_g39617 Chara braunii HOM05D005917 ORTHO05D007517 1.6e-86 324.3 574 39.9
AagrBONN_evm.TU.Sc2ySwM_344.1277 Anthoceros agrestis HOM05D005917 ORTHO05D007517 3.3e-60 236.9 334 44.6
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 5.0e-45 186.4 194 57.2
HanXRQChr11g0328131 Helianthus annuus HOM05D005917 ORTHO05D007517 1.9e-44 184.5 286 43.7
TPR.G18819 Trifolium pratense HOM05D005917 ORTHO05D007517 1.5e-41 174.9 280 41.4
Prupe.3G225800 Prunus persica HOM05D005917 ORTHO05D007517 1.2e-25 122.1 97 68.0
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.6e-22 111.7 81 67.9
MCO15G396 Micromonas commoda HOM05D005917 ORTHO05D007517 3.9e-21 107.1 510 26.1
Manes.16G064350 Manihot esculenta HOM05D005917 ORTHO05D007517 1.1e-20 105.5 69 73.9
Cre11.g482050 Chlamydomonas reinhardtii HOM05D005917 ORTHO05D007517 2.5e-20 104.4 291 28.9
CAN.G244.10 Capsicum annuum HOM05D000180 ORTHO05D000099 2.2e-16 91.3 76 60.5
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.1e-15 89.0 63 69.8
FAN02G4549 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.6e-14 85.1 54 72.2
Cfa024500 Carpinus fangiana HOM05D005917 ORTHO05D007517 8.7e-13 79.3 175 31.4
Nn6g32048 Nelumbo nucifera HOM05D005917 ORTHO05D007517 7.4e-12 76.3 81 56.8
PRCOL_00002377 Prasinoderma coloniale HOM05D005917 ORTHO05D333437 9.9e-09 65.9 340 24.4


User provided reference genes

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