Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07836 Davidia involucrata HOM05D005150 ORTHO05D006070 6.6e-75 283.9 136 100.0
Actinidia21452 Actinidia chinensis HOM05D005150 ORTHO05D006070 4.2e-29 131.7 103 66.0
Hma1.2p1_0133F.1_g061080 Hydrangea macrophylla HOM05D005150 ORTHO05D006070 4.2e-29 131.7 98 69.4
QL08p029214 Quercus lobata HOM05D005150 ORTHO05D006070 6.0e-28 127.9 98 64.3
CiPaw.03G276700 Carya illinoinensis HOM05D005150 ORTHO05D006070 2.3e-27 125.9 98 62.2
Cfa014266 Carpinus fangiana HOM05D005150 ORTHO05D006070 3.9e-27 125.2 92 62.0
TAR629G0945 Trochodendron aralioides HOM05D005150 ORTHO05D006070 1.1e-26 123.6 98 63.3
Haze_12715 Corylus avellana HOM05D005150 ORTHO05D006070 1.5e-26 123.2 92 62.0
Rhsim06G0172300 Rhododendron simsii HOM05D005150 ORTHO05D006070 1.3e-25 120.2 102 64.7
DCAR_012901 Daucus carota HOM05D005150 ORTHO05D006070 1.1e-24 117.1 93 64.5
Thecc.01G187900 Theobroma cacao HOM05D005150 ORTHO05D006070 1.8e-24 116.3 101 61.4
Duzib133G1369 Durio zibethinus HOM05D005150 ORTHO05D006070 2.4e-24 115.9 102 60.8
Hma1.2p1_0405F.1_g145660 Hydrangea macrophylla HOM05D005150 ORTHO05D006070 2.4e-24 115.9 98 61.2
Nn1g07416 Nelumbo nucifera HOM05D005150 ORTHO05D006070 3.1e-24 115.5 98 59.2
CSS0010457 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 1.2e-23 113.6 102 62.7
CSS0040672 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 1.2e-23 113.6 102 62.7
Glyma.13G073800 Glycine max HOM05D005150 ORTHO05D006070 3.4e-23 112.1 100 58.0
Rhsim06G0172200 Rhododendron simsii HOM05D005150 ORTHO05D006070 5.9e-23 111.3 101 56.4
Gorai.007G167900 Gossypium raimondii HOM05D005150 ORTHO05D006070 7.6e-23 110.9 92 57.6
Gohir.A11G150900 Gossypium hirsutum HOM05D005150 ORTHO05D006070 1.3e-22 110.2 92 56.5
Gohir.D11G157400 Gossypium hirsutum HOM05D005150 ORTHO05D006070 1.7e-22 109.8 92 56.5
Phvul.006G020400 Phaseolus vulgaris HOM05D005150 ORTHO05D006070 1.7e-22 109.8 100 58.0
Potri.002G222900 Populus trichocarpa HOM05D005150 ORTHO05D006070 1.7e-22 109.8 99 56.6
Cpa.g.sc136.7 Carica papaya HOM05D005150 ORTHO05D006070 5.0e-22 108.2 102 54.9
vmacro12127 Vaccinium macrocarpon HOM05D005150 ORTHO05D006070 8.5e-22 107.5 102 57.8
Aqoxy1G04044 Aquilegia oxysepala HOM05D005150 ORTHO05D006070 1.1e-21 107.1 92 57.6
CsaV3_7G002850 Cucumis sativus L. HOM05D005150 ORTHO05D006070 1.4e-21 106.7 99 56.6
Duzib138G1375 Durio zibethinus HOM05D005150 ORTHO05D006070 1.4e-21 106.7 106 54.7
FAN05G2177 Fragaria x ananassa HOM05D005150 ORTHO05D006070 1.4e-21 106.7 101 56.4
RcHm_v2.0_Chr2g0156971 Rosa chinensis HOM05D005150 ORTHO05D006070 1.4e-21 106.7 98 57.1
MELO3C018891.2 Cucumis melo HOM05D005150 ORTHO05D006070 1.9e-21 106.3 100 56.0
Sabra14G0124000 Salix brachista HOM05D005150 ORTHO05D006070 2.5e-21 105.9 103 56.3
CAN.G584.30 Capsicum annuum HOM05D005150 ORTHO05D006070 3.2e-21 105.5 92 57.6
FAN02G0634 Fragaria x ananassa HOM05D005150 ORTHO05D006070 3.2e-21 105.5 98 55.1
Lalb_Chr19g0125521 Lupinus albus HOM05D005150 ORTHO05D006070 4.2e-21 105.1 95 54.7
Nn1g03285 Nelumbo nucifera HOM05D005150 ORTHO05D006070 4.2e-21 105.1 101 56.4
Atru.chr6.3335 Acer truncatum HOM05D005150 ORTHO05D006070 5.5e-21 104.8 112 53.6
ClCG02G002530 Citrullus lanatus HOM05D005150 ORTHO05D006070 5.5e-21 104.8 102 54.9
ClCG02G002570 Citrullus lanatus HOM05D005150 ORTHO05D006070 5.5e-21 104.8 102 54.9
Gohir.A07G189900 Gossypium hirsutum HOM05D005150 ORTHO05D006070 9.4e-21 104.0 99 56.6
Gohir.D07G196100 Gossypium hirsutum HOM05D005150 ORTHO05D006070 9.4e-21 104.0 99 56.6
Gorai.001G219600 Gossypium raimondii HOM05D005150 ORTHO05D006070 9.4e-21 104.0 99 56.6
Phvul.008G205400 Phaseolus vulgaris HOM05D005150 ORTHO05D006070 9.4e-21 104.0 96 55.2
CSS0044074 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 1.2e-20 103.6 114 50.9
DCAR_032165 Daucus carota HOM05D005150 ORTHO05D006070 1.6e-20 103.2 98 55.1
Lj6g0009976 Lotus japonicus HOM05D005150 ORTHO05D006070 1.6e-20 103.2 96 56.2
Lsat_1_v5_gn_7_95641 Lactuca sativa HOM05D005150 ORTHO05D006070 2.1e-20 102.8 99 56.6
VMungo0647G0767 Vigna mungo HOM05D005150 ORTHO05D006070 2.1e-20 102.8 96 54.2
Potri.014G162400 Populus trichocarpa HOM05D005150 ORTHO05D006070 4.6e-20 101.7 100 55.0
TAR624G1342 Trochodendron aralioides HOM05D005150 ORTHO05D006070 4.6e-20 101.7 92 55.4
HanXRQChr10g0306371 Helianthus annuus HOM05D005150 ORTHO05D006070 7.9e-20 100.9 96 57.3
Sed0026674 Sechium edule HOM05D005150 ORTHO05D006070 7.9e-20 100.9 96 57.3
ECA234G4664 Erigeron canadensis HOM05D005150 ORTHO05D006070 2.3e-19 99.4 97 55.7
Lsat_1_v5_gn_9_105581 Lactuca sativa HOM05D005150 ORTHO05D006070 2.3e-19 99.4 100 58.0
Sed0012024 Sechium edule HOM05D005150 ORTHO05D006070 5.1e-19 98.2 96 54.2
vmacro12128 Vaccinium macrocarpon HOM05D005150 ORTHO05D006070 5.1e-19 98.2 102 53.9
Glyma.14G039800 Glycine max HOM05D005150 ORTHO05D006070 6.7e-19 97.8 96 53.1
Manes.12G062667 Manihot esculenta HOM05D005150 ORTHO05D006070 1.5e-18 96.7 99 55.6
Manes.12G062700 Manihot esculenta HOM05D005150 ORTHO05D006070 1.5e-18 96.7 99 55.6
ECA240G3606 Erigeron canadensis HOM05D005150 ORTHO05D006070 1.9e-18 96.3 95 55.8
FvH4_6g41440 Fragaria vesca HOM05D005150 ORTHO05D006070 1.9e-18 96.3 94 55.3
Gohir.A07G176012 Gossypium hirsutum HOM05D005150 ORTHO05D006070 1.9e-18 96.3 98 53.1
Gorai.001G194000 Gossypium raimondii HOM05D005150 ORTHO05D006070 1.9e-18 96.3 100 52.0
Manes.13G063792 Manihot esculenta HOM05D005150 ORTHO05D006070 3.3e-18 95.5 105 52.4
Medtr7g058970 Medicago truncatula HOM05D005150 ORTHO05D006070 3.3e-18 95.5 104 49.0
Prupe.3G204400 Prunus persica HOM05D005150 ORTHO05D006070 3.3e-18 95.5 109 52.3
arahy.Tifrunner.gnm1.ann1.CR4AH5 Arachis hypogaea HOM05D005150 ORTHO05D006070 1.3e-17 93.6 99 52.5
arahy.Tifrunner.gnm1.ann1.V5U7H6 Arachis hypogaea HOM05D005150 ORTHO05D006070 1.3e-17 93.6 99 52.5
Lj1g0017552 Lotus japonicus HOM05D005150 ORTHO05D006070 3.7e-17 92.0 81 56.8
DCAR_021114 Daucus carota HOM05D005150 ORTHO05D006070 4.8e-17 91.7 80 61.2
Lsat_1_v5_gn_5_124661 Lactuca sativa HOM05D005150 ORTHO05D006070 4.8e-17 91.7 96 52.1
Oeu029950.1 Olea europaea HOM05D005150 ORTHO05D006070 8.2e-17 90.9 98 50.0
Rhsim04G0044800 Rhododendron simsii HOM05D005150 ORTHO05D006070 1.4e-16 90.1 97 53.6
LjContig00564g0005952 Lotus japonicus HOM05D005150 ORTHO05D006070 1.8e-16 89.7 97 51.5
Lalb_Chr04g0249481 Lupinus albus HOM05D005150 ORTHO05D006070 4.1e-16 88.6 100 47.0
PGR142G3730 Punica granatum HOM05D005150 ORTHO05D006070 5.3e-16 88.2 92 50.0
Glyma.02G276100 Glycine max HOM05D005150 ORTHO05D006070 9.1e-16 87.4 98 50.0
Medtr5g088550 Medicago truncatula HOM05D005150 ORTHO05D006070 2.6e-15 85.9 103 50.5
HanXRQChr03g0075721 Helianthus annuus HOM05D005150 ORTHO05D006070 5.9e-15 84.7 96 52.1
Peaxi162Scf00942g00037 Petunia axillaris HOM05D005150 ORTHO05D006070 1.0e-14 84.0 86 48.8
Solyc07g006590.1 Solanum lycopersicum HOM05D005150 ORTHO05D006070 1.0e-14 84.0 79 54.4
Sopen07g002670 Solanum pennellii HOM05D005150 ORTHO05D006070 1.0e-14 84.0 79 54.4
TPR.G12632 Trifolium pratense HOM05D005150 ORTHO05D006070 1.0e-14 84.0 89 50.6
MD09G1119700 Malus domestica HOM05D005150 ORTHO05D006070 2.2e-14 82.8 114 45.6
HanXRQChr17g0535431 Helianthus annuus HOM05D005150 ORTHO05D006070 3.8e-14 82.0 88 47.7
TPR.G14637 Trifolium pratense HOM05D005150 ORTHO05D006070 3.8e-14 82.0 107 47.7
Oeu040478.2 Olea europaea HOM05D005150 ORTHO05D006070 1.1e-13 80.5 98 48.0
HanXRQChr04g0126761 Helianthus annuus HOM05D005150 ORTHO05D006070 1.4e-13 80.1 84 48.8
Ciclev10017035m.g Citrus clementina HOM05D005150 ORTHO05D006070 1.9e-13 79.7 99 48.5
Ah.14g082900 Amaranthus hybridus HOM05D005150 ORTHO05D006070 7.2e-13 77.8 102 45.1
Aa31sc697G10 Aethionema arabicum HOM05D005150 ORTHO05D006070 1.2e-12 77.0 92 42.4
AL7G44580 Arabidopsis lyrata HOM05D005150 ORTHO05D006070 3.6e-12 75.5 96 43.8
AT2G04795 Arabidopsis thaliana HOM05D005150 ORTHO05D006070 4.7e-12 75.1 98 44.9
EL10Ac4g09390 Beta vulgaris HOM05D005150 ORTHO05D006070 4.7e-12 75.1 100 46.0
COL.COLO4_25851 Corchorus olitorius HOM05D005150 ORTHO05D006070 4.7e-12 75.1 76 55.3
MD17G1110500 Malus domestica HOM05D005150 ORTHO05D006070 4.7e-12 75.1 112 42.9
BcaB06g26977 Brassica carinata HOM05D025437 ORTHO05D006070 1.0e-11 73.9 95 43.2
A04p09910 Brassica napus HOM05D005150 ORTHO05D006070 1.0e-11 73.9 95 42.1
BolC4t25919H Brassica oleracea HOM05D005150 ORTHO05D006070 1.0e-11 73.9 95 42.1
BraA04t16654Z Brassica rapa HOM05D005150 ORTHO05D006070 1.0e-11 73.9 95 42.1
AUR62005176 Chenopodium quinoa HOM05D005150 ORTHO05D006070 1.0e-11 73.9 100 43.0
FAN14G4944 Fragaria x ananassa HOM05D008097 ORTHO05D006070 1.0e-11 73.9 64 53.1
BcaC02g09491 Brassica carinata HOM05D005150 ORTHO05D006070 1.4e-11 73.6 95 42.1
Nitab4.5_0000244g0100 Nicotiana tabacum HOM05D005150 ORTHO05D006070 1.8e-11 73.2 81 46.9
AT5G35732 Arabidopsis thaliana HOM05D005150 ORTHO05D006070 2.3e-11 72.8 96 42.7
AL3G42390 Arabidopsis lyrata HOM05D005150 ORTHO05D006070 5.1e-11 71.6 92 42.4
Sp3g23410 Schrenkiella parvula HOM05D005150 ORTHO05D006070 5.1e-11 71.6 93 43.0
Sc06g0009750 Simmondsia chinensis HOM05D005150 ORTHO05D006070 5.1e-11 71.6 88 47.7
THA.LOC104808855 Tarenaya hassleriana HOM05D005150 ORTHO05D006070 5.1e-11 71.6 95 44.2
A03p44460 Brassica napus HOM05D005150 ORTHO05D006070 6.7e-11 71.2 92 42.4
BraA03t13579Z Brassica rapa HOM05D005150 ORTHO05D006070 6.7e-11 71.2 92 42.4
C04p43410 Brassica napus HOM05D005150 ORTHO05D006070 8.8e-11 70.9 95 41.1
BcaC01g06899 Brassica carinata HOM05D005150 ORTHO05D006070 1.5e-10 70.1 92 42.4
C03p55240 Brassica napus HOM05D005150 ORTHO05D006070 2.0e-10 69.7 92 41.3
BolC3t17797H Brassica oleracea HOM05D005150 ORTHO05D006070 2.0e-10 69.7 92 41.3
AUR62000791 Chenopodium quinoa HOM05D005150 ORTHO05D006070 2.0e-10 69.7 100 41.0
ECA236G2208 Erigeron canadensis HOM05D005150 ORTHO05D006070 2.6e-10 69.3 86 44.2
Carub.0007s3148 Capsella rubella HOM05D005150 ORTHO05D006070 3.3e-10 68.9 104 39.4
AUR62017541 Chenopodium quinoa HOM05D005150 ORTHO05D006070 3.3e-10 68.9 106 40.6
Peaxi162Scf32072g00001 Petunia axillaris HOM05D005150 ORTHO05D006070 3.3e-10 68.9 66 47.0
Sp7g06500 Schrenkiella parvula HOM05D005150 ORTHO05D006070 3.3e-10 68.9 103 39.8
BcaB08g34491 Brassica carinata HOM05D005150 ORTHO05D006070 4.4e-10 68.6 92 41.3
AUR62015079 Chenopodium quinoa HOM05D005150 ORTHO05D006070 4.4e-10 68.6 106 40.6
THA.LOC104826613 Tarenaya hassleriana HOM05D005150 ORTHO05D006070 4.4e-10 68.6 97 44.3
EL10Ac9g22759 Beta vulgaris HOM05D005150 ORTHO05D006070 5.7e-10 68.2 107 43.9
Ah.01g002180 Amaranthus hybridus HOM05D005150 ORTHO05D006070 7.4e-10 67.8 94 42.6
CARHR216910 Cardamine hirsuta HOM05D005150 ORTHO05D006070 4.8e-09 65.1 98 42.9
PSO541G4821 Papaver somniferum HOM05D005150 ORTHO05D006070 4.8e-09 65.1 106 42.5
Hund24140 Selenicereus undatus HOM05D005150 ORTHO05D006070 6.3e-09 64.7 103 37.9
Migut.M00011 Erythranthe guttata HOM05D005150 ORTHO05D006070 1.4e-08 63.5 95 44.2
CARHR102770 Cardamine hirsuta HOM05D005150 ORTHO05D006070 1.8e-08 63.2 92 38.0
Oeu012338.1 Olea europaea HOM05D005150 ORTHO05D006070 3.1e-08 62.4 87 47.1
ClCG02G009450 Citrullus lanatus HOM05D005150 ORTHO05D006070 4.1e-08 62.0 101 39.6
PSO675G4632 Papaver somniferum HOM05D005150 ORTHO05D006070 7.0e-08 61.2 106 42.5
Aa31sc53G30 Aethionema arabicum HOM05D005150 ORTHO05D006070 9.1e-08 60.8 97 40.2
Eucgr.K00667 Eucalyptus grandis HOM05D005150 ORTHO05D006070 9.1e-08 60.8 102 40.2
TWI36G0863 Tripterygium wilfordii HOM05D005150 ORTHO05D006070 3.4e-07 58.9 94 43.6
Sc21g0000930 Simmondsia chinensis HOM05D005150 ORTHO05D006070 8.5e-06 54.3 101 35.6


User provided reference genes

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