Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 2.0e-92 342.4 171 100.0
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 1.2e-65 253.4 173 73.4
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 1.9e-63 246.1 166 69.9
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 1.9e-63 246.1 157 73.2
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 4.3e-63 245.0 148 77.0
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 2.1e-62 242.7 162 71.6
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 8.0e-62 240.7 155 73.5
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 8.0e-62 240.7 169 69.8
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.1e-61 240.4 157 72.6
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 1.1e-61 240.4 168 70.8
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.4e-61 240.0 155 73.5
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 1.8e-61 239.6 159 71.7
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 3.1e-61 238.8 152 75.7
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 5.2e-61 238.0 169 70.4
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 8.9e-61 237.3 166 70.5
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.2e-60 236.9 163 70.6
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 2.6e-60 235.7 164 73.2
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 3.4e-60 235.3 163 69.9
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 5.8e-60 234.6 155 73.5
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 7.5e-60 234.2 170 65.9
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 7.5e-60 234.2 165 70.3
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 1.7e-59 233.0 165 68.5
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 1.1e-58 230.3 162 68.5
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 1.9e-58 229.6 166 68.7
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.4e-58 229.2 160 68.8
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.4e-58 229.2 160 68.8
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.4e-58 229.2 160 68.8
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 5.4e-58 228.0 162 67.3
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 5.4e-58 228.0 166 68.1
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 9.2e-58 227.3 159 71.1
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.2e-57 226.9 160 68.1
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 1.6e-57 226.5 164 68.3
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.6e-57 226.5 168 65.5
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 6.0e-57 224.6 163 66.9
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.7e-56 223.0 148 72.3
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 8.6e-56 220.7 162 67.9
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 1.1e-55 220.3 162 65.4
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 1.9e-55 219.5 143 72.7
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 1.9e-55 219.5 159 67.3
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 5.6e-55 218.0 134 76.9
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 9.5e-55 217.2 141 74.5
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 2.1e-54 216.1 165 66.7
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 6.2e-54 214.5 162 64.8
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 8.1e-54 214.2 164 63.4
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 3.1e-53 212.2 229 50.2
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 2.0e-52 209.5 159 64.2
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 2.6e-52 209.1 154 65.6
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 5.8e-52 208.0 156 63.5
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 7.6e-52 207.6 161 64.0
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 2.9e-51 205.7 158 63.9
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 1.4e-50 203.4 157 66.9
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 2.4e-50 202.6 166 60.8
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 4.1e-50 201.8 159 62.9
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 1.2e-49 200.3 150 59.3
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.2e-49 200.3 146 68.5
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 3.5e-49 198.7 154 60.4
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 1.0e-48 197.2 155 59.4
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 1.3e-48 196.8 156 59.0
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 1.3e-48 196.8 156 59.0
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 1.7e-48 196.4 156 59.6
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 6.6e-48 194.5 169 58.0
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 8.6e-48 194.1 171 60.2
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 8.6e-48 194.1 170 57.1
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 1.5e-47 193.4 166 63.9
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 3.3e-47 192.2 153 57.5
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 7.3e-47 191.0 131 67.2
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 1.2e-46 190.3 153 55.6
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 4.7e-46 188.3 152 57.2
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.8e-45 186.4 155 60.6
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 2.4e-45 186.0 145 62.1
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 4.0e-45 185.3 154 57.1
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 4.4e-44 181.8 213 48.4
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.4e-42 176.8 140 59.3
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 1.4e-42 176.8 140 57.9
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 2.4e-42 176.0 140 57.9
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 3.2e-42 175.6 113 72.6
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 4.2e-42 175.3 141 61.0
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 1.6e-41 173.3 147 55.1
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 2.7e-41 172.6 133 63.9
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 3.5e-41 172.2 140 57.9
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 3.5e-41 172.2 140 55.7
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 1.3e-40 170.2 140 55.7
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 2.3e-40 169.5 152 58.6
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 2.1e-38 162.9 128 57.8
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 1.8e-37 159.8 145 58.6
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 3.1e-37 159.1 147 53.1
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 2.6e-36 156.0 126 59.5
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 2.9e-35 152.5 98 70.4
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 1.4e-34 150.2 147 49.0
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 1.4e-34 150.2 165 54.5
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 3.5e-33 145.6 153 48.4
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.5e-31 140.2 89 79.8
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 2.5e-31 139.4 102 71.6
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 3.1e-29 132.5 99 71.7
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 5.3e-29 131.7 88 77.3
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 9.0e-29 131.0 89 74.2
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 1.6e-25 120.2 90 68.9
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 3.5e-25 119.0 94 58.5
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 3.3e-23 112.5 104 44.2
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 4.3e-23 112.1 141 42.6
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 7.4e-23 111.3 147 40.8
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 6.2e-22 108.2 74 62.2
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 2.4e-21 106.3 86 58.1
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.9e-21 104.8 72 72.2
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 9.0e-21 104.4 73 63.0
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 2.0e-20 103.2 144 37.5
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 4.3e-15 85.5 66 72.7
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 3.1e-13 79.3 110 40.0
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.7e-11 73.6 73 47.9
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 6.5e-11 71.6 51 66.7
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 1.5e-07 60.5 42 69.0


User provided reference genes

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