Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07684 Davidia involucrata HOM05D006510 ORTHO05D008171 0.0e+00 1204.5 614 100.0
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 7.7e-256 887.1 691 69.2
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 7.7e-256 887.1 691 69.2
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 2.3e-252 875.5 692 69.9
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 1.4e-249 866.3 692 66.6
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 2.2e-247 859.0 693 66.5
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 6.1e-245 850.9 696 66.5
Atru.chr6.2773 Acer truncatum HOM05D006510 ORTHO05D008171 1.3e-242 843.2 691 65.4
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 3.8e-239 831.6 692 65.2
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 1.5e-238 829.7 721 64.1
Hma1.2p1_0178F.1_g078700 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 2.7e-237 825.5 669 68.9
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 2.3e-236 822.4 692 64.6
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 4.4e-235 818.1 691 65.4
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 6.3e-234 814.3 689 64.3
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 3.1e-233 812.0 596 72.0
MD11G1004500 Malus domestica HOM05D006510 ORTHO05D008171 8.6e-231 803.9 690 63.8
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 1.1e-230 803.5 690 63.3
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 2.5e-230 802.4 679 62.6
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 6.1e-229 797.7 606 69.5
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 1.0e-228 797.0 690 63.2
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 5.2e-228 794.7 679 62.0
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 5.7e-227 791.2 680 62.1
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.7e-226 789.6 680 61.9
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 3.7e-226 788.5 660 65.2
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 6.3e-226 787.7 690 62.5
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 1.6e-224 783.1 689 62.1
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 3.5e-224 781.9 689 62.1
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 5.9e-224 781.2 690 62.5
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 7.8e-224 780.8 693 62.0
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 1.0e-223 780.4 693 62.5
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 1.3e-223 780.0 689 61.8
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 6.6e-223 777.7 685 62.3
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 5.6e-222 774.6 685 62.3
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 9.5e-222 773.9 684 61.7
Oeu001793.2 Olea europaea HOM05D006510 ORTHO05D008171 1.2e-221 773.5 696 61.4
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 1.6e-221 773.1 685 62.3
FAN09G2536 Fragaria x ananassa HOM05D006510 ORTHO05D008171 2.1e-221 772.7 671 61.1
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 4.7e-221 771.5 677 62.5
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 6.1e-221 771.2 684 61.8
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 1.4e-220 770.0 692 61.1
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 2.3e-220 769.2 685 61.6
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 1.2e-219 766.9 691 60.8
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 1.5e-219 766.5 695 61.7
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 2.6e-219 765.8 695 60.1
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 7.5e-219 764.2 695 60.1
CsaV3_1G037360 Cucumis sativus L. HOM05D006510 ORTHO05D008171 1.3e-218 763.5 689 60.1
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 1.3e-218 763.5 692 60.8
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 4.9e-218 761.5 690 60.6
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 6.4e-218 761.1 689 61.1
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 3.2e-217 758.8 688 60.8
VMungo1127G1883 Vigna mungo HOM05D006510 ORTHO05D008171 3.2e-217 758.8 686 61.7
MELO3C002806.2 Cucumis melo HOM05D006510 ORTHO05D008171 9.2e-217 757.3 689 59.4
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 1.2e-216 756.9 690 61.0
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 1.6e-216 756.5 689 60.8
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 1.6e-216 756.5 683 61.3
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 1.5e-214 750.0 691 61.5
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 7.3e-214 747.7 688 61.0
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 1.8e-212 743.0 687 59.0
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 3.1e-212 742.3 691 60.3
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 1.7e-210 736.5 681 60.5
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 2.2e-210 736.1 690 59.0
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 6.4e-210 734.6 703 58.3
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 1.2e-208 730.3 692 59.1
Sc12g0003550 Simmondsia chinensis HOM05D006510 ORTHO05D008171 2.7e-208 729.2 688 58.6
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 3.5e-208 728.8 689 59.9
Sed0011358 Sechium edule HOM05D006510 ORTHO05D008171 4.6e-208 728.4 689 57.6
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 1.3e-207 726.9 689 59.9
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 2.5e-206 722.6 693 58.2
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 4.3e-206 721.8 683 58.4
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 1.6e-205 719.9 649 59.8
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 4.7e-205 718.4 684 58.2
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 8.1e-205 717.6 685 58.5
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 1.1e-204 717.2 671 59.3
Manes.07G057100 Manihot esculenta HOM05D006510 ORTHO05D008171 1.8e-204 716.5 689 57.5
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 5.2e-204 714.9 684 58.2
C04p03920 Brassica napus HOM05D006510 ORTHO05D008171 5.2e-204 714.9 677 58.6
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 1.5e-203 713.4 682 58.1
A05p03350 Brassica napus HOM05D006510 ORTHO05D008171 3.4e-203 712.2 662 59.7
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 7.5e-203 711.1 685 57.8
BraA05t19323Z Brassica rapa HOM05D006510 ORTHO05D008171 1.7e-202 709.9 663 59.1
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 8.6e-199 697.6 682 56.7
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 3.6e-197 692.2 696 56.8
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 1.5e-195 686.8 680 56.3
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 4.9e-194 681.8 649 58.1
arahy.Tifrunner.gnm1.ann1.H5IL2E Arachis hypogaea HOM05D006510 ORTHO05D008171 6.0e-192 674.9 650 58.8
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 8.7e-191 671.0 693 54.7
BolC4t22028H Brassica oleracea HOM05D006510 ORTHO05D008171 3.8e-186 655.6 574 62.2
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 3.6e-181 639.0 582 60.7
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 3.6e-181 639.0 682 53.4
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 2.1e-173 613.2 652 54.8
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 5.3e-172 608.6 684 49.0
Lsat_1_v5_gn_4_64481 Lactuca sativa HOM05D006510 ORTHO05D008171 9.0e-172 607.8 674 51.8
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 1.7e-170 603.6 691 50.7
Zm00001eb297610 Zea mays HOM05D006510 ORTHO05D008171 1.1e-161 574.3 679 48.3
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 2.7e-160 569.7 682 47.5
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 5.3e-156 555.4 659 48.1
HPP92_014652 Vanilla planifolia HOM05D006510 ORTHO05D008171 1.6e-152 543.9 679 50.2
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 4.5e-147 525.8 575 53.9
TAR629G2876 Trochodendron aralioides HOM05D006510 ORTHO05D008171 3.1e-140 503.1 523 54.7
SalBow7G4578 Salvia bowleyana HOM05D006510 ORTHO05D008171 1.3e-130 471.1 421 60.1
SEGI_27047 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 4.8e-125 452.6 553 47.7
SMO164G0050 Selaginella moellendorffii HOM05D006510 ORTHO05D008171 3.5e-91 340.1 604 37.1
Cpa.g.sc52.162 Carica papaya HOM05D006510 ORTHO05D008171 1.3e-82 311.6 232 69.0
Pp3c9_21860 Physcomitrium patens HOM05D006510 ORTHO05D008171 7.3e-81 305.8 653 34.3
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 7.6e-78 295.8 548 36.3
CBR_g35046 Chara braunii HOM05D006510 ORTHO05D008171 3.2e-60 237.3 741 28.3
Cpa.g.sc52.161 Carica papaya HOM05D006510 ORTHO05D008171 1.8e-26 125.2 122 54.1
MCO09G591 Micromonas commoda HOM05D006510 ORTHO05D008171 2.2e-13 81.6 478 23.0
BcaB01g03423 Brassica carinata HOM05D001990 ORTHO05D002033 1.8e-10 72.0 86 48.8
PRCOL_00003865 Prasinoderma coloniale HOM05D006510 ORTHO05D008171 2.6e-09 68.2 368 23.9
HanXRQChr09g0251831 Helianthus annuus HOM05D006510 ORTHO05D008171 1.1e-07 62.8 61 55.7


User provided reference genes

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