Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07670 Davidia involucrata HOM05D008311 ORTHO05D183374 1.2e-100 369.8 175 100.0
Dinv29140 Davidia involucrata HOM05D008311 ORTHO05D010526 8.6e-19 97.8 51 92.2
Actinidia08755 Actinidia chinensis HOM05D008311 ORTHO05D010526 3.7e-14 82.4 51 76.5
Aqoxy4G02584 Aquilegia oxysepala HOM05D008311 ORTHO05D010526 3.7e-14 82.4 51 76.5
CiPaw.05G215000 Carya illinoinensis HOM05D008311 ORTHO05D010526 6.4e-14 81.6 51 78.4
Haze_00388 Corylus avellana HOM05D008311 ORTHO05D010526 8.4e-14 81.3 51 76.5
FAN03G2372 Fragaria x ananassa HOM05D008311 ORTHO05D010526 1.1e-13 80.9 52 75.0
FAN10G1178 Fragaria x ananassa HOM05D008311 ORTHO05D010526 1.1e-13 80.9 52 75.0
QL09p022981 Quercus lobata HOM05D008311 ORTHO05D010526 1.4e-13 80.5 52 73.1
TAR629G0038 Trochodendron aralioides HOM05D008311 ORTHO05D010526 1.4e-13 80.5 51 76.5
GSVIVG01024350001 Vitis vinifera HOM05D008311 ORTHO05D010526 1.4e-13 80.5 51 76.5
MELO3C021863.2 Cucumis melo HOM05D008311 ORTHO05D010526 3.2e-13 79.3 49 77.6
Prupe.2G328000 Prunus persica HOM05D008311 ORTHO05D010526 4.1e-13 79.0 51 72.5
ClCG09G017160 Citrullus lanatus HOM05D008311 ORTHO05D010526 5.4e-13 78.6 49 77.6
Sed0001927 Sechium edule HOM05D008311 ORTHO05D010526 9.2e-13 77.8 49 77.6
DCAR_020420 Daucus carota HOM05D008311 ORTHO05D010526 1.2e-12 77.4 51 74.5
MBI04_g20345_MAGBIO Magnolia biondii HOM05D008311 ORTHO05D010526 1.2e-12 77.4 51 72.5
MD07G1310100 Malus domestica HOM05D008311 ORTHO05D010526 1.2e-12 77.4 51 72.5
Gohir.A08G221662 Gossypium hirsutum HOM05D008311 ORTHO05D010526 1.6e-12 77.0 96 50.0
Manes.09G128000 Manihot esculenta HOM05D008311 ORTHO05D010526 2.1e-12 76.6 51 74.5
RcHm_v2.0_Chr1g0384481 Rosa chinensis HOM05D008311 ORTHO05D010526 2.7e-12 76.3 51 74.5
Cfa016060 Carpinus fangiana HOM05D008311 ORTHO05D010526 3.5e-12 75.9 51 72.5
COL.COLO4_15199 Corchorus olitorius HOM05D008311 ORTHO05D010526 6.0e-12 75.1 51 70.6
CsaV3_2G036620 Cucumis sativus L. HOM05D008311 ORTHO05D010526 6.0e-12 75.1 49 73.5
Nn3g20131 Nelumbo nucifera HOM05D008311 ORTHO05D010526 7.8e-12 74.7 51 68.6
vmacro06529 Vaccinium macrocarpon HOM05D008311 ORTHO05D010526 1.0e-11 74.3 51 68.6
CDE11G1038 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 2.3e-11 73.2 51 64.7
Thecc.05G218800 Theobroma cacao HOM05D008311 ORTHO05D010526 2.3e-11 73.2 51 68.6
Ciclev10020460m.g Citrus clementina HOM05D008311 ORTHO05D010526 5.1e-11 72.0 51 70.6
Os04g0592500 Oryza sativa ssp. japonica HOM05D008311 ORTHO05D010526 8.6e-11 71.2 51 60.8
Zm00001eb201380 Zea mays HOM05D008311 ORTHO05D010526 1.5e-10 70.5 50 68.0
Zm00001eb429910 Zea mays HOM05D008311 ORTHO05D010526 1.5e-10 70.5 50 66.0
Zm00001eb341760 Zea mays HOM05D008311 ORTHO05D010526 3.3e-10 69.3 50 66.0
Gohir.D08G241300 Gossypium hirsutum HOM05D008311 ORTHO05D010526 4.3e-10 68.9 52 69.2
Gorai.004G256700 Gossypium raimondii HOM05D008311 ORTHO05D010526 4.3e-10 68.9 52 69.2
Duzib128G1797 Durio zibethinus HOM05D008311 ORTHO05D010526 5.6e-10 68.6 51 62.7
ATR0665G332 Amborella trichopoda HOM05D008311 ORTHO05D010526 1.6e-09 67.0 51 66.7
Atru.chr12.1923 Acer truncatum HOM05D008311 ORTHO05D010526 2.1e-09 66.6 51 66.7
Lj3A885T48 Lonicera japonica HOM05D008311 ORTHO05D010526 2.1e-09 66.6 47 68.1
SEGI_24543 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 2.8e-09 66.2 51 60.8
SEGI_38800 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 2.8e-09 66.2 51 60.8
AUR62002082 Chenopodium quinoa HOM05D008311 ORTHO05D010526 3.6e-09 65.9 68 48.5
AUR62028199 Chenopodium quinoa HOM05D008311 ORTHO05D010526 3.6e-09 65.9 51 56.9
EL10Ac3g05056 Beta vulgaris HOM05D008311 ORTHO05D010526 6.2e-09 65.1 51 54.9
Eucgr.A02984 Eucalyptus grandis HOM05D008311 ORTHO05D010526 1.1e-08 64.3 51 58.8
Lsat_1_v5_gn_8_108920 Lactuca sativa HOM05D008311 ORTHO05D010526 1.5e-07 60.5 51 58.8
CDE11G1017 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 2.2e-06 56.6 48 54.2
HPP92_005385 Vanilla planifolia HOM05D008311 ORTHO05D010526 2.2e-06 56.6 40 67.5


User provided reference genes

Program Settings