Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 5.3e-56 220.7 105 100.0
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 7.6e-55 216.9 105 98.1
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 2.1e-52 208.8 105 93.3
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 3.5e-52 208.0 105 92.4
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 3.9e-51 204.5 105 91.4
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 8.7e-51 203.4 105 90.5
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 1.9e-50 202.2 105 89.5
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 2.5e-50 201.8 105 89.5
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 2.5e-50 201.8 105 88.6
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 3.3e-50 201.4 105 90.5
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 3.3e-50 201.4 104 90.4
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 4.3e-50 201.1 105 88.6
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 4.3e-50 201.1 105 89.5
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 5.7e-50 200.7 105 88.6
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 7.4e-50 200.3 105 88.6
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 9.7e-50 199.9 105 86.7
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 1.3e-49 199.5 105 88.6
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 1.3e-49 199.5 105 89.5
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 2.2e-49 198.7 105 87.6
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 2.2e-49 198.7 105 87.6
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 2.8e-49 198.4 105 87.6
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 3.7e-49 198.0 105 87.6
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 4.8e-49 197.6 105 86.7
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 4.8e-49 197.6 105 85.7
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 6.3e-49 197.2 104 87.5
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 8.2e-49 196.8 105 85.7
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 8.2e-49 196.8 105 85.7
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 1.1e-48 196.4 105 86.7
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 1.1e-48 196.4 105 86.7
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 1.1e-48 196.4 105 85.7
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 1.4e-48 196.1 104 87.5
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 1.8e-48 195.7 105 87.6
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 2.4e-48 195.3 105 86.7
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 2.4e-48 195.3 105 84.8
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 2.4e-48 195.3 105 85.7
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 2.4e-48 195.3 105 87.6
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 3.1e-48 194.9 105 85.7
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 3.1e-48 194.9 105 84.8
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 4.1e-48 194.5 105 84.8
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 5.3e-48 194.1 105 86.7
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 6.9e-48 193.7 105 84.8
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 9.0e-48 193.4 105 84.8
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 1.2e-47 193.0 105 85.7
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 1.5e-47 192.6 105 85.7
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 1.5e-47 192.6 105 85.7
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 2.6e-47 191.8 105 85.7
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 2.6e-47 191.8 105 85.7
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 2.6e-47 191.8 105 85.7
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 2.6e-47 191.8 105 85.7
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 3.4e-47 191.4 105 83.8
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 4.5e-47 191.0 103 85.4
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 5.9e-47 190.7 105 84.8
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 1.0e-46 189.9 104 84.6
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 1.3e-46 189.5 105 84.8
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.7e-46 189.1 105 84.8
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 2.2e-46 188.7 105 82.9
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 2.2e-46 188.7 105 82.9
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 2.2e-46 188.7 105 82.9
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 3.8e-46 188.0 104 84.6
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 5.0e-46 187.6 105 81.9
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 5.0e-46 187.6 104 82.7
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 5.0e-46 187.6 105 82.9
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 6.5e-46 187.2 104 81.7
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 8.5e-46 186.8 104 83.7
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 1.4e-45 186.0 104 80.8
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 1.9e-45 185.7 104 83.7
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 1.9e-45 185.7 104 83.7
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 2.5e-45 185.3 105 84.8
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 3.2e-45 184.9 105 80.0
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 3.2e-45 184.9 105 79.0
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 3.2e-45 184.9 104 83.7
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 5.5e-45 184.1 104 79.8
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 7.2e-45 183.7 105 81.0
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 9.4e-45 183.3 104 80.8
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 1.2e-44 183.0 105 80.0
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 1.6e-44 182.6 105 79.0
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 1.6e-44 182.6 105 81.0
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 2.1e-44 182.2 105 79.0
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 2.1e-44 182.2 105 78.1
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 2.7e-44 181.8 103 78.6
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 4.6e-44 181.0 104 80.8
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 6.1e-44 180.6 103 77.7
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 1.0e-43 179.9 113 77.9
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 2.3e-43 178.7 99 81.8
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 3.9e-43 177.9 105 78.1
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 3.9e-43 177.9 105 78.1
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 3.9e-43 177.9 104 79.8
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 6.7e-43 177.2 88 94.3
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 6.7e-43 177.2 88 94.3
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 8.8e-43 176.8 118 71.2
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 1.5e-42 176.0 105 77.1
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 1.5e-42 176.0 103 77.7
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 2.5e-42 175.3 99 80.8
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 3.3e-42 174.9 99 79.8
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 4.3e-42 174.5 122 68.9
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 4.3e-42 174.5 88 88.6
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 1.7e-41 172.6 88 88.6
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 1.7e-41 172.6 88 90.9
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 2.2e-41 172.2 88 88.6
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 1.1e-40 169.9 102 77.5
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 1.8e-40 169.1 102 76.5
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 3.1e-40 168.3 88 87.5
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 1.2e-39 166.4 95 81.1
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 1.5e-39 166.0 91 82.4
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 4.5e-39 164.5 104 72.1
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 5.9e-39 164.1 113 69.9
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 5.9e-39 164.1 86 87.2
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 5.9e-39 164.1 95 80.0
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 7.7e-39 163.7 88 83.0
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 7.7e-39 163.7 88 83.0
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 1.0e-38 163.3 88 83.0
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 1.7e-38 162.5 89 84.3
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 5.0e-38 161.0 82 90.2
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 6.5e-38 160.6 88 83.0
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 1.2e-36 156.4 88 78.4
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 4.7e-36 154.5 88 80.7
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 1.0e-35 153.3 88 77.3
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 1.8e-35 152.5 88 77.3
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 5.1e-35 151.0 88 78.4
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 8.2e-33 143.7 88 73.9
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 8.2e-33 143.7 88 73.9
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 8.2e-33 143.7 88 73.9
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 7.2e-29 130.6 66 87.9
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 1.2e-28 129.8 99 55.6
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 5.2e-27 124.4 87 67.8
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 2.0e-26 122.5 65 84.6
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 4.8e-25 117.9 96 52.1
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 8.5e-22 107.1 105 52.4
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 4.7e-20 101.3 76 60.5
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 2.2e-17 92.4 77 54.5
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 1.8e-16 89.4 51 80.4
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 7.0e-16 87.4 50 84.0
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 7.7e-15 84.0 51 78.4
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 8.5e-14 80.5 44 72.7
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 1.1e-13 80.1 50 68.0
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 6.3e-09 64.3 50 64.0
FAN02G4440 Fragaria x ananassa HOM05D012050 ORTHO05D011158 8.6e-06 53.9 28 78.6


User provided reference genes

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