Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07568 Davidia involucrata HOM05D032653 ORTHO05D182718 1.1e-149 533.1 249 100.0
Dinv17313 Davidia involucrata HOM05D032653 ORTHO05D185244 2.0e-109 399.4 189 96.8
Dinv07569 Davidia involucrata HOM05D032653 ORTHO05D005678 1.8e-78 296.6 166 83.1
Dinv07566 Davidia involucrata HOM05D004790 ORTHO05D005678 1.7e-52 210.3 231 49.8
Dinv17315 Davidia involucrata HOM05D004790 ORTHO05D005678 4.3e-40 169.1 230 42.6
MD17G1241500 Malus domestica HOM05D004790 ORTHO05D005678 2.7e-10 70.1 228 26.8
Peaxi162Scf00206g00710 Petunia axillaris HOM05D004790 ORTHO05D005678 3.6e-10 69.7 206 25.7
SHI10412 Sapria himalayana HOM05D004790 ORTHO05D005678 4.7e-10 69.3 181 30.4
HanXRQChr17g0553511 Helianthus annuus HOM05D004790 ORTHO05D005678 6.1e-10 68.9 203 28.1
MD09G1249000 Malus domestica HOM05D004790 ORTHO05D005678 1.0e-09 68.2 228 26.8
Aqoxy1G02499 Aquilegia oxysepala HOM05D004790 ORTHO05D005678 1.4e-09 67.8 172 27.9
BcaC06g32633 Brassica carinata HOM05D004790 ORTHO05D005678 1.8e-09 67.4 210 27.6
Ca_01506_v3 Cicer arietinum L. HOM05D004790 ORTHO05D005678 2.3e-09 67.0 208 26.4
Hma1.2p1_1201F.1_g266610 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.3e-09 67.0 146 31.5
Lalb_Chr22g0356521 Lupinus albus HOM05D004790 ORTHO05D005678 2.3e-09 67.0 221 24.9
Peaxi162Scf00132g00037 Petunia axillaris HOM05D004790 ORTHO05D005678 2.3e-09 67.0 191 24.6
Cpa.g.sc34.151 Carica papaya HOM05D004790 ORTHO05D005678 3.0e-09 66.6 201 32.3
Hma1.2p1_3039F.1_g331970 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.0e-09 66.6 146 32.2
GSVIVG01020532001 Vitis vinifera HOM05D004790 ORTHO05D005678 3.0e-09 66.6 226 26.1
Nitab4.5_0000585g0100 Nicotiana tabacum HOM05D004790 ORTHO05D005678 4.0e-09 66.2 213 25.8
arahy.Tifrunner.gnm1.ann1.DEE7JK Arachis hypogaea HOM05D004790 ORTHO05D005678 1.2e-08 64.7 206 26.7
Medtr2g090285 Medicago truncatula HOM05D004790 ORTHO05D005678 1.5e-08 64.3 206 23.8
ATR0680G165 Amborella trichopoda HOM05D004790 ORTHO05D005678 2.6e-08 63.5 188 23.4
AT4G28260 Arabidopsis thaliana HOM05D004790 ORTHO05D005678 3.3e-08 63.2 209 26.8
arahy.Tifrunner.gnm1.ann1.1EW4X0 Arachis hypogaea HOM05D004790 ORTHO05D005678 3.3e-08 63.2 206 24.8
CAN.G1655.2 Capsicum annuum HOM05D004790 ORTHO05D005678 3.3e-08 63.2 209 25.8
Hma1.2p1_3039F.1_g332010 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.3e-08 63.2 219 26.0
Lj3g0014290 Lotus japonicus HOM05D004790 ORTHO05D005678 3.3e-08 63.2 223 26.0
Hma1.2p1_1201F.1_g266650 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 4.4e-08 62.8 219 26.0
Carub.0007s1250 Capsella rubella HOM05D004790 ORTHO05D005678 7.5e-08 62.0 211 27.0
Aa31LG11G10330 Aethionema arabicum HOM05D004790 ORTHO05D005678 9.7e-08 61.6 210 25.7
A08p20170 Brassica napus HOM05D004790 ORTHO05D005678 1.3e-07 61.2 204 25.5
Lsat_1_v5_gn_8_133340 Lactuca sativa HOM05D004790 ORTHO05D005678 1.7e-07 60.8 209 24.4
Phvul.005G104500 Phaseolus vulgaris HOM05D004790 ORTHO05D005678 1.7e-07 60.8 205 26.8
A03p57970 Brassica napus HOM05D004790 ORTHO05D005678 2.2e-07 60.5 207 25.6
BraA03t14860Z Brassica rapa HOM05D004790 ORTHO05D005678 2.2e-07 60.5 207 25.6
BraA08t33977Z Brassica rapa HOM05D004790 ORTHO05D005678 2.2e-07 60.5 204 25.5
Manes.13G147300 Manihot esculenta HOM05D004790 ORTHO05D005678 2.2e-07 60.5 215 28.4
AL7G24340 Arabidopsis lyrata HOM05D004790 ORTHO05D005678 2.8e-07 60.1 209 26.8
Lsat_1_v5_gn_4_65660 Lactuca sativa HOM05D004790 ORTHO05D005678 2.8e-07 60.1 209 26.3
C07p56090 Brassica napus HOM05D004790 ORTHO05D005678 4.8e-07 59.3 209 25.8
RcHm_v2.0_Chr2g0126141 Rosa chinensis HOM05D004790 ORTHO05D005678 6.3e-07 58.9 245 23.7
CSS0024255 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 8.2e-07 58.5 75 42.7
CSS0033247 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 8.2e-07 58.5 75 42.7
Glyma.13G298000 Glycine max HOM05D004790 ORTHO05D005678 8.2e-07 58.5 205 25.9
C08p10710 Brassica napus HOM05D004790 ORTHO05D005678 1.1e-06 58.2 202 25.2
BolC7t46084H Brassica oleracea HOM05D004790 ORTHO05D005678 1.1e-06 58.2 209 27.8
Potri.013G133200 Populus trichocarpa HOM05D004790 ORTHO05D005678 1.1e-06 58.2 235 25.1
BolC8t48743H Brassica oleracea HOM05D004790 ORTHO05D005678 2.4e-06 57.0 199 25.6
DCAR_013003 Daucus carota HOM05D004790 ORTHO05D005678 2.4e-06 57.0 101 34.7
Thhalv10024944m.g Eutrema salsugineum HOM05D004790 ORTHO05D005678 3.1e-06 56.6 131 32.1
THA.LOC104804061 Tarenaya hassleriana HOM05D004790 ORTHO05D005678 3.1e-06 56.6 214 26.2
BcaC06g32632 Brassica carinata HOM05D004790 ORTHO05D005678 4.1e-06 56.2 210 26.2
COL.COLO4_30176 Corchorus olitorius HOM05D004790 ORTHO05D005678 4.1e-06 56.2 203 24.1
Aa31LG11G14100 Aethionema arabicum HOM05D004790 ORTHO05D005678 5.3e-06 55.8 140 32.1
CANSAT11G0193 Cannabis sativa HOM05D004790 ORTHO05D005678 7.0e-06 55.5 115 29.6
Actinidia11039 Actinidia chinensis HOM05D004790 ORTHO05D005678 9.1e-06 55.1 83 37.3
MSTRG.12822 Avicennia marina HOM05D004790 ORTHO05D005678 9.1e-06 55.1 120 31.7
CsaV3_6G012960 Cucumis sativus L. HOM05D004790 ORTHO05D005678 9.1e-06 55.1 142 33.1
Hma1.2p1_1201F.1_g266630 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 9.1e-06 55.1 165 27.9
Hma1.2p1_3039F.1_g331990 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 9.1e-06 55.1 165 27.9


User provided reference genes

Program Settings