Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07566 Davidia involucrata HOM05D004790 ORTHO05D005678 3.8e-198 694.5 323 100.0
Dinv17315 Davidia involucrata HOM05D004790 ORTHO05D005678 2.0e-117 426.4 271 76.0
Dinv07568 Davidia involucrata HOM05D032653 ORTHO05D182718 1.7e-52 210.7 231 49.8
Dinv17313 Davidia involucrata HOM05D032653 ORTHO05D185244 3.9e-41 172.9 159 57.2
Dinv07569 Davidia involucrata HOM05D032653 ORTHO05D005678 3.4e-37 159.8 160 53.1
GSVIVG01020532001 Vitis vinifera HOM05D004790 ORTHO05D005678 7.9e-26 122.1 356 26.1
PGR042G3525 Punica granatum HOM05D004790 ORTHO05D005678 8.7e-25 118.6 506 23.5
MD17G1241500 Malus domestica HOM05D004790 ORTHO05D005678 2.5e-24 117.1 502 22.7
Cpa.g.sc34.151 Carica papaya HOM05D004790 ORTHO05D005678 4.3e-24 116.3 491 24.0
MD09G1249000 Malus domestica HOM05D004790 ORTHO05D005678 4.3e-24 116.3 505 22.4
Aqoxy1G02499 Aquilegia oxysepala HOM05D004790 ORTHO05D005678 2.1e-23 114.0 473 22.6
C07p56090 Brassica napus HOM05D004790 ORTHO05D005678 2.8e-23 113.6 499 25.7
BolC7t46084H Brassica oleracea HOM05D004790 ORTHO05D005678 3.7e-23 113.2 497 24.3
COL.COLO4_30176 Corchorus olitorius HOM05D004790 ORTHO05D005678 3.7e-23 113.2 506 22.9
A03p57970 Brassica napus HOM05D004790 ORTHO05D005678 6.2e-23 112.5 495 24.6
BraA03t14860Z Brassica rapa HOM05D004790 ORTHO05D005678 6.2e-23 112.5 495 24.6
BolC8t48743H Brassica oleracea HOM05D004790 ORTHO05D005678 1.1e-22 111.7 492 24.4
Lsat_1_v5_gn_4_65660 Lactuca sativa HOM05D004790 ORTHO05D005678 1.1e-22 111.7 491 23.0
Lalb_Chr22g0356521 Lupinus albus HOM05D004790 ORTHO05D005678 1.1e-22 111.7 497 22.1
Cfa014604 Carpinus fangiana HOM05D004790 ORTHO05D005678 1.8e-22 110.9 507 22.7
Manes.13G147300 Manihot esculenta HOM05D004790 ORTHO05D005678 3.1e-22 110.2 514 22.6
BcaC06g32632 Brassica carinata HOM05D004790 ORTHO05D005678 4.0e-22 109.8 497 24.7
Medtr2g090285 Medicago truncatula HOM05D004790 ORTHO05D005678 5.3e-22 109.4 495 21.2
Duzib248G1314 Durio zibethinus HOM05D004790 ORTHO05D005678 9.0e-22 108.6 500 22.8
Sp7g26220 Schrenkiella parvula HOM05D004790 ORTHO05D005678 1.5e-21 107.8 492 24.6
Thhalv10024944m.g Eutrema salsugineum HOM05D004790 ORTHO05D005678 2.6e-21 107.1 509 24.2
HanXRQChr17g0553511 Helianthus annuus HOM05D004790 ORTHO05D005678 2.6e-21 107.1 491 23.4
Hma1.2p1_1201F.1_g266650 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.6e-21 107.1 402 24.4
unitig_26.g9948 Utricularia gibba HOM05D004790 ORTHO05D005678 2.6e-21 107.1 510 22.0
arahy.Tifrunner.gnm1.ann1.DEE7JK Arachis hypogaea HOM05D004790 ORTHO05D005678 3.4e-21 106.7 508 23.6
Hma1.2p1_3039F.1_g332010 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.8e-21 105.9 402 24.4
Lalb_Chr14g0366851 Lupinus albus HOM05D004790 ORTHO05D005678 5.8e-21 105.9 497 21.1
Sabra13G0113200 Salix brachista HOM05D004790 ORTHO05D005678 7.6e-21 105.5 506 22.3
Ca_01506_v3 Cicer arietinum L. HOM05D004790 ORTHO05D005678 1.0e-20 105.1 497 21.3
arahy.Tifrunner.gnm1.ann1.1EW4X0 Arachis hypogaea HOM05D004790 ORTHO05D005678 1.3e-20 104.8 510 23.5
Manes.12G090600 Manihot esculenta HOM05D004790 ORTHO05D005678 1.3e-20 104.8 505 21.4
Thecc.02G178300 Theobroma cacao HOM05D004790 ORTHO05D005678 1.3e-20 104.8 506 22.1
Carub.0007s1250 Capsella rubella HOM05D004790 ORTHO05D005678 1.7e-20 104.4 510 23.5
Peaxi162Scf00206g00710 Petunia axillaris HOM05D004790 ORTHO05D005678 1.7e-20 104.4 506 22.7
VMungo1080G1693 Vigna mungo HOM05D004790 ORTHO05D005678 1.7e-20 104.4 489 22.5
Gohir.D04G143900 Gossypium hirsutum HOM05D004790 ORTHO05D005678 2.9e-20 103.6 509 22.4
Gorai.012G129400 Gossypium raimondii HOM05D004790 ORTHO05D005678 2.9e-20 103.6 509 22.4
Potri.013G133200 Populus trichocarpa HOM05D004790 ORTHO05D005678 2.9e-20 103.6 506 22.3
Glyma.12G203700 Glycine max HOM05D004790 ORTHO05D005678 4.9e-20 102.8 490 21.8
Glyma.13G298000 Glycine max HOM05D004790 ORTHO05D005678 6.5e-20 102.4 489 21.5
Aa31LG11G10330 Aethionema arabicum HOM05D004790 ORTHO05D005678 8.4e-20 102.1 510 21.6
Gohir.A04G104200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 1.1e-19 101.7 509 22.8
AL7G24340 Arabidopsis lyrata HOM05D004790 ORTHO05D005678 2.5e-19 100.5 509 23.8
AT4G28260 Arabidopsis thaliana HOM05D004790 ORTHO05D005678 4.2e-19 99.8 508 23.8
Haze_13149 Corylus avellana HOM05D004790 ORTHO05D005678 5.5e-19 99.4 487 21.8
Lj3g0014290 Lotus japonicus HOM05D004790 ORTHO05D005678 5.5e-19 99.4 507 20.7
Phvul.005G104500 Phaseolus vulgaris HOM05D004790 ORTHO05D005678 7.1e-19 99.0 490 21.6
THA.LOC104804061 Tarenaya hassleriana HOM05D004790 ORTHO05D005678 1.2e-18 98.2 511 22.5
Nitab4.5_0000585g0100 Nicotiana tabacum HOM05D004790 ORTHO05D005678 2.1e-18 97.4 513 21.2
BcaC06g32633 Brassica carinata HOM05D004790 ORTHO05D005678 2.7e-18 97.1 387 24.5
CAN.G1655.2 Capsicum annuum HOM05D004790 ORTHO05D005678 3.5e-18 96.7 508 22.0
Hma1.2p1_3039F.1_g331970 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.5e-18 96.7 315 25.7
TPR.G6443 Trifolium pratense HOM05D004790 ORTHO05D005678 4.6e-18 96.3 506 21.1
Cc05_g07060 Coffea canephora HOM05D004790 ORTHO05D005678 7.9e-18 95.5 513 22.2
Sabra19G0112400 Salix brachista HOM05D004790 ORTHO05D005678 1.8e-17 94.4 507 22.3
SHI10412 Sapria himalayana HOM05D004790 ORTHO05D005678 2.3e-17 94.0 515 22.7
Sabra19G0111100 Salix brachista HOM05D004790 ORTHO05D005678 3.0e-17 93.6 507 21.9
Lsat_1_v5_gn_8_133340 Lactuca sativa HOM05D004790 ORTHO05D005678 1.5e-16 91.3 504 21.4
Gorai.013G075500 Gossypium raimondii HOM05D004790 ORTHO05D005678 3.3e-16 90.1 498 21.1
Psat5g271320 Pisum sativum HOM05D004790 ORTHO05D005678 7.4e-16 89.0 356 22.5
Hma1.2p1_1201F.1_g266630 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.8e-15 87.0 175 33.7
Peaxi162Scf00132g00037 Petunia axillaris HOM05D004790 ORTHO05D005678 2.8e-15 87.0 276 23.9
Nitab4.5_0007168g0010 Nicotiana tabacum HOM05D004790 ORTHO05D005678 3.7e-15 86.7 514 21.2
Hma1.2p1_1201F.1_g266640 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 8.2e-15 85.5 321 25.2
Hma1.2p1_3039F.1_g332000 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 8.2e-15 85.5 321 25.2
Sc12g0003010 Simmondsia chinensis HOM05D004790 ORTHO05D005678 8.2e-15 85.5 207 29.0
Hma1.2p1_3039F.1_g331990 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.1e-14 85.1 175 33.1
Dinv26430 Davidia involucrata HOM05D004790 ORTHO05D005678 1.8e-14 84.3 259 25.5
Gohir.A13G055800 Gossypium hirsutum HOM05D004790 ORTHO05D005678 4.1e-14 83.2 446 20.9
vmacro12295 Vaccinium macrocarpon HOM05D004790 ORTHO05D005678 5.3e-14 82.8 187 28.9
TAR627G0452 Trochodendron aralioides HOM05D004790 ORTHO05D005678 6.9e-14 82.4 192 28.6
Nn1g04055 Nelumbo nucifera HOM05D004790 ORTHO05D005678 1.2e-13 81.6 189 28.6
Zm00001eb044390 Zea mays HOM05D004790 ORTHO05D005678 1.2e-13 81.6 178 29.2
AUR62037353 Chenopodium quinoa HOM05D004790 ORTHO05D005678 2.0e-13 80.9 205 27.8
FvH4_6g26160 Fragaria vesca HOM05D004790 ORTHO05D005678 2.0e-13 80.9 184 28.8
FAN02G0059 Fragaria x ananassa HOM05D004790 ORTHO05D005678 2.0e-13 80.9 184 28.3
Os10g0500600 Oryza sativa ssp. japonica HOM05D004790 ORTHO05D005678 2.0e-13 80.9 387 22.2
RcHm_v2.0_Chr2g0126141 Rosa chinensis HOM05D004790 ORTHO05D005678 2.0e-13 80.9 184 28.8
TWI36G0090 Tripterygium wilfordii HOM05D004790 ORTHO05D005678 2.6e-13 80.5 189 28.0
Dinv23649 Davidia involucrata HOM05D004790 ORTHO05D005678 4.5e-13 79.7 191 27.2
MSTRG.12822 Avicennia marina HOM05D004790 ORTHO05D005678 5.9e-13 79.3 185 27.6
Prupe.3G136400 Prunus persica HOM05D004790 ORTHO05D005678 1.0e-12 78.6 182 28.0
PGSC0003DMG400021668 Solanum tuberosum HOM05D004790 ORTHO05D005678 1.0e-12 78.6 379 20.8
BcaB03g12561 Brassica carinata HOM05D004790 ORTHO05D005678 1.3e-12 78.2 211 28.0
Hund01104 Selenicereus undatus HOM05D004790 ORTHO05D005678 1.3e-12 78.2 207 27.1
ATR0680G165 Amborella trichopoda HOM05D004790 ORTHO05D005678 1.7e-12 77.8 198 27.3
Eucgr.A01811 Eucalyptus grandis HOM05D004790 ORTHO05D005678 1.7e-12 77.8 191 27.2
Ah.01g015210 Amaranthus hybridus HOM05D004790 ORTHO05D005678 2.2e-12 77.4 207 27.1
Ciclev10014904m.g Citrus clementina HOM05D004790 ORTHO05D005678 2.2e-12 77.4 189 28.6
CSS0024255 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 2.9e-12 77.0 190 27.9
CSS0033247 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 2.9e-12 77.0 190 27.9
CANSAT11G0193 Cannabis sativa HOM05D004790 ORTHO05D005678 3.8e-12 76.6 184 26.6
CiPaw.03G175600 Carya illinoinensis HOM05D004790 ORTHO05D005678 3.8e-12 76.6 191 28.3
EL10Ac9g20754 Beta vulgaris HOM05D004790 ORTHO05D005678 5.0e-12 76.3 206 26.2
QL08p038483 Quercus lobata HOM05D004790 ORTHO05D005678 5.0e-12 76.3 181 27.1
Aa31LG11G14100 Aethionema arabicum HOM05D004790 ORTHO05D005678 6.5e-12 75.9 162 32.7
A08p20170 Brassica napus HOM05D004790 ORTHO05D005678 6.5e-12 75.9 212 28.3
C08p10710 Brassica napus HOM05D004790 ORTHO05D005678 6.5e-12 75.9 211 28.4
Migut.H01089 Erythranthe guttata HOM05D004790 ORTHO05D005678 6.5e-12 75.9 181 27.1
CsaV3_6G012960 Cucumis sativus L. HOM05D004790 ORTHO05D005678 8.5e-12 75.5 111 37.8
MBI19_g19847_MAGBIO Magnolia biondii HOM05D004790 ORTHO05D005678 8.5e-12 75.5 196 27.6
Atru.chr6.3004 Acer truncatum HOM05D004790 ORTHO05D005678 1.4e-11 74.7 190 26.8
ClCG02G017590 Citrullus lanatus HOM05D004790 ORTHO05D005678 1.4e-11 74.7 111 36.9
MELO3C013614.2 Cucumis melo HOM05D004790 ORTHO05D005678 1.4e-11 74.7 111 36.9
Oeu029923.1 Olea europaea HOM05D004790 ORTHO05D005678 1.4e-11 74.7 186 28.0
BraA08t33977Z Brassica rapa HOM05D004790 ORTHO05D005678 1.9e-11 74.3 212 28.3
Zm00001eb044450 Zea mays HOM05D004790 ORTHO05D005678 1.9e-11 74.3 148 30.4
Oeu045846.1 Olea europaea HOM05D004790 ORTHO05D005678 2.5e-11 73.9 178 27.0
SGA_v2.0_scaffold109G31134 Striga asiatica HOM05D004790 ORTHO05D005678 2.5e-11 73.9 187 27.8
DCAR_013003 Daucus carota HOM05D004790 ORTHO05D005678 7.2e-11 72.4 191 24.6
Duzib052G0346 Durio zibethinus HOM05D004790 ORTHO05D005678 7.2e-11 72.4 210 27.1
HPP92_027303 Vanilla planifolia HOM05D004790 ORTHO05D005678 7.2e-11 72.4 168 26.2
CDE02G0639 Ceratophyllum demersum HOM05D004790 ORTHO05D005678 9.4e-11 72.0 196 25.5
Sed0002654 Sechium edule HOM05D004790 ORTHO05D005678 1.2e-10 71.6 111 36.0
CARHR235970 Cardamine hirsuta HOM05D004790 ORTHO05D005678 1.6e-10 71.2 182 28.6
Hma1.2p1_0213F.1_g090370 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.1e-10 70.9 88 40.9
PSO541G2110 Papaver somniferum HOM05D004790 ORTHO05D005678 2.1e-10 70.9 53 52.8
PSO675G6339 Papaver somniferum HOM05D004790 ORTHO05D005678 2.1e-10 70.9 53 52.8
Hma1.2p1_1201F.1_g266610 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 3.6e-10 70.1 151 29.8
Lj1A724T21 Lonicera japonica HOM05D004790 ORTHO05D005678 3.6e-10 70.1 164 27.4
Hma1.2p1_3039F.1_g331980 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 4.6e-10 69.7 189 27.0
Actinidia11039 Actinidia chinensis HOM05D004790 ORTHO05D005678 6.1e-10 69.3 85 41.2
FAN05G3153 Fragaria x ananassa HOM05D004790 ORTHO05D005678 7.9e-10 68.9 88 38.6
FAN05G5699 Fragaria x ananassa HOM05D004790 ORTHO05D005678 7.9e-10 68.9 88 38.6
Actinidia09859 Actinidia chinensis HOM05D004790 ORTHO05D005678 1.0e-09 68.6 85 40.0
Gohir.D13G066200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 1.8e-09 67.8 189 24.9
Rhsim06G0143900 Rhododendron simsii HOM05D004790 ORTHO05D005678 1.8e-09 67.8 88 39.8
Solyc10g008420.3 Solanum lycopersicum HOM05D004790 ORTHO05D005678 3.0e-09 67.0 108 33.3
Sopen10g004250 Solanum pennellii HOM05D004790 ORTHO05D005678 3.0e-09 67.0 108 33.3
ECA234G1653 Erigeron canadensis HOM05D004790 ORTHO05D005678 3.9e-09 66.6 184 25.5
SalBow7G3762 Salvia bowleyana HOM05D004790 ORTHO05D005678 8.8e-09 65.5 98 35.7
SalBow7G1856 Salvia bowleyana HOM05D004790 ORTHO05D005678 7.4e-08 62.4 90 37.8
AUR62042487 Chenopodium quinoa HOM05D004790 ORTHO05D005678 2.2e-07 60.8 58 41.4
SEGI_15900 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 3.1e-06 57.0 52 38.5
SEGI_40185 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 3.1e-06 57.0 52 38.5


User provided reference genes

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