Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 4.9e-74 281.2 156 100.0
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 2.4e-65 252.3 155 91.6
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 3.4e-59 231.9 163 80.4
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 2.2e-58 229.2 155 85.2
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 6.0e-56 221.1 155 79.4
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 1.8e-55 219.5 151 79.5
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 4.3e-54 214.9 155 79.4
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 2.6e-51 205.7 155 75.5
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 4.5e-51 204.9 155 74.2
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 2.2e-50 202.6 156 73.7
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 3.8e-50 201.8 155 74.2
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 6.4e-50 201.1 155 73.5
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 8.4e-50 200.7 154 74.7
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 8.4e-50 200.7 155 74.2
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 8.4e-50 200.7 156 73.1
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 1.4e-49 199.9 154 75.3
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 5.5e-49 198.0 156 71.8
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 5.5e-49 198.0 155 71.6
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 2.7e-48 195.7 155 71.6
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 4.6e-48 194.9 154 73.4
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 1.0e-47 193.7 156 70.5
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 1.0e-47 193.7 156 70.5
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 3.0e-47 192.2 155 69.7
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 3.0e-47 192.2 155 69.7
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 3.9e-47 191.8 155 69.0
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 5.1e-47 191.4 155 69.0
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 2.5e-46 189.1 153 72.5
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 5.6e-46 188.0 155 69.7
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 7.4e-46 187.6 155 66.5
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 7.4e-46 187.6 155 71.0
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.6e-45 186.4 157 70.7
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 1.6e-45 186.4 149 67.8
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 2.1e-45 186.0 157 70.7
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 3.7e-45 185.3 155 70.3
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 4.8e-45 184.9 166 67.5
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 3.1e-44 182.2 155 67.7
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 6.9e-44 181.0 158 67.1
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 1.2e-43 180.3 158 66.5
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 1.5e-43 179.9 155 67.7
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 7.6e-43 177.6 170 60.6
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 7.6e-43 177.6 156 67.3
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 1.3e-42 176.8 129 72.9
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 8.4e-42 174.1 153 62.7
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 1.1e-41 173.7 169 62.7
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.1e-41 173.7 157 67.5
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 1.9e-41 172.9 156 66.7
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 3.2e-41 172.2 157 68.2
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 4.2e-41 171.8 168 62.5
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 4.2e-41 171.8 155 61.9
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 7.1e-41 171.0 155 63.9
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 2.7e-40 169.1 156 59.6
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 2.7e-40 169.1 160 64.4
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 3.5e-40 168.7 153 62.1
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 3.5e-40 168.7 158 62.7
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 4.6e-40 168.3 157 65.0
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 1.8e-39 166.4 155 65.2
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 2.3e-39 166.0 133 71.4
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 3.0e-39 165.6 120 73.3
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.9e-39 165.2 161 63.4
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 6.7e-39 164.5 114 77.2
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 8.7e-39 164.1 112 78.6
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 1.1e-38 163.7 156 62.8
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 1.1e-38 163.7 152 60.5
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 1.1e-38 163.7 198 55.1
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.5e-38 163.3 113 78.8
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 3.3e-38 162.2 112 77.7
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 3.3e-38 162.2 155 64.5
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 7.4e-38 161.0 158 60.8
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 9.7e-38 160.6 152 59.9
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 2.8e-37 159.1 158 57.6
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 2.8e-37 159.1 155 58.1
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 3.7e-37 158.7 157 58.0
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 6.3e-37 157.9 151 59.6
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 8.2e-37 157.5 157 57.3
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 1.4e-36 156.8 157 57.3
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 6.9e-36 154.5 155 56.1
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 1.5e-35 153.3 160 60.6
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 2.6e-35 152.5 155 54.8
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 1.4e-33 146.7 133 64.7
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 5.5e-33 144.8 117 70.1
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.4e-31 140.2 137 56.2
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 1.4e-31 140.2 120 67.5
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 1.8e-31 139.8 155 52.9
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 9.7e-30 134.0 155 53.5
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 1.7e-29 133.3 151 49.7
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 2.8e-29 132.5 93 75.3
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 4.1e-28 128.6 118 68.6
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 2.6e-27 125.9 125 56.0
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 4.5e-27 125.2 106 69.8
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 1.3e-26 123.6 132 56.8
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 1.7e-26 123.2 88 76.1
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 5.0e-26 121.7 158 43.7
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 5.0e-26 121.7 155 49.7
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 3.2e-25 119.0 89 71.9
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 2.1e-24 116.3 99 65.7
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.6e-24 115.5 89 69.7
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 3.6e-24 115.5 159 50.3
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 4.7e-24 115.2 158 46.8
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 6.1e-24 114.8 97 63.9
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 7.9e-24 114.4 162 45.7
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 3.9e-23 112.1 87 70.1
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 2.6e-22 109.4 97 61.9
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 4.4e-22 108.6 154 50.6
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 2.4e-20 102.8 119 58.0
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 2.4e-20 102.8 75 76.0
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 1.7e-18 96.7 136 41.2
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 8.5e-18 94.4 105 57.1
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 5.5e-17 91.7 88 62.5
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 1.6e-16 90.1 158 46.8
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 3.9e-15 85.5 149 38.9
Gohir.A11G286823 Gossypium hirsutum HOM05D006133 ORTHO05D007855 4.4e-14 82.0 77 63.6
Os07g0208801 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 1.4e-12 77.0 65 61.5
BcaB02g10593 Brassica carinata HOM05D006133 ORTHO05D007855 5.3e-12 75.1 70 60.0
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 9.1e-12 74.3 120 43.3
Zm00001eb304600 Zea mays HOM05D006133 ORTHO05D007855 2.5e-09 66.2 97 40.2
Eucgr.B00901 Eucalyptus grandis HOM05D006133 ORTHO05D007855 6.7e-07 58.2 137 35.8
A05p11770 Brassica napus HOM05D006133 ORTHO05D007855 1.5e-06 57.0 70 48.6
AL4G11580 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 2.0e-06 56.6 128 35.9
Eucgr.B00955 Eucalyptus grandis HOM05D006133 ORTHO05D007855 9.7e-06 54.3 137 34.3
TAR636G0634 Trochodendron aralioides HOM05D006133 ORTHO05D007855 9.7e-06 54.3 124 37.9


User provided reference genes

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