Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 3.1e-195 684.9 328 100.0
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 2.5e-176 622.1 328 89.9
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 3.2e-176 621.7 323 90.1
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 7.2e-176 620.5 325 89.5
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 3.9e-174 614.8 318 89.6
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 2.5e-173 612.1 330 87.6
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 5.7e-173 610.9 322 89.4
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 7.4e-173 610.5 332 86.7
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 2.2e-172 609.0 320 89.7
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.8e-172 608.6 324 88.9
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.8e-172 608.6 323 89.5
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 3.7e-172 608.2 319 87.8
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 3.7e-172 608.2 321 87.5
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 4.8e-172 607.8 317 89.3
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 6.3e-172 607.4 320 88.1
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 2.4e-171 605.5 329 87.8
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 3.1e-171 605.1 325 87.1
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 3.1e-171 605.1 311 90.4
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 3.1e-171 605.1 325 87.1
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.1e-171 604.7 324 88.3
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 6.9e-171 604.0 325 86.8
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 1.2e-170 603.2 321 88.2
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 1.5e-170 602.8 327 86.9
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 1.5e-170 602.8 336 85.1
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 2.0e-170 602.4 318 89.0
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.6e-170 602.1 317 88.6
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 3.4e-170 601.7 320 88.1
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 3.4e-170 601.7 322 86.0
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 7.7e-170 600.5 316 89.2
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 7.7e-170 600.5 322 87.6
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.3e-169 599.7 317 88.6
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 1.7e-169 599.4 317 88.3
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.7e-169 599.4 317 88.3
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 1.7e-169 599.4 322 87.6
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 2.2e-169 599.0 322 87.6
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 5.0e-169 597.8 311 90.4
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 6.5e-169 597.4 328 84.8
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 4.2e-168 594.7 325 86.2
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 7.2e-168 594.0 314 87.9
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 7.2e-168 594.0 317 87.7
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 4.7e-167 591.3 316 87.0
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 4.7e-167 591.3 322 86.0
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 6.1e-167 590.9 330 84.2
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 7.9e-167 590.5 326 84.4
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 1.0e-166 590.1 318 85.8
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 1.8e-166 589.3 327 85.0
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 2.3e-166 589.0 316 86.7
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 3.0e-166 588.6 326 84.7
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 3.9e-166 588.2 317 87.4
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 3.9e-166 588.2 321 86.0
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 3.9e-166 588.2 322 85.7
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 5.1e-166 587.8 322 86.3
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 5.1e-166 587.8 322 86.0
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.1e-165 586.6 320 85.0
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 2.0e-165 585.9 325 84.0
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 2.0e-165 585.9 323 84.8
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 2.0e-165 585.9 325 84.3
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 2.0e-165 585.9 318 84.6
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 2.0e-165 585.9 318 84.6
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 2.6e-165 585.5 315 85.7
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 2.6e-165 585.5 330 85.5
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 3.3e-165 585.1 320 85.0
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 3.3e-165 585.1 323 84.5
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 4.4e-165 584.7 320 85.0
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 9.7e-165 583.6 324 83.6
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 9.7e-165 583.6 324 83.6
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 1.7e-164 582.8 328 83.5
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 2.2e-164 582.4 317 87.1
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 4.8e-164 581.3 323 83.9
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 4.8e-164 581.3 323 83.9
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 6.3e-164 580.9 321 83.5
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 6.3e-164 580.9 319 85.9
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 2.4e-163 578.9 312 87.2
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 5.3e-163 577.8 323 83.6
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 5.3e-163 577.8 323 83.6
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 7.0e-163 577.4 302 89.4
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.6e-162 576.2 322 84.2
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 3.5e-162 575.1 327 83.2
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 4.5e-162 574.7 325 82.8
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 4.5e-162 574.7 326 83.4
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 4.5e-162 574.7 319 82.8
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 5.9e-162 574.3 316 84.2
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 5.9e-162 574.3 385 73.5
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 5.9e-162 574.3 321 83.8
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.0e-161 573.5 326 83.1
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 1.0e-161 573.5 317 83.0
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 1.1e-160 570.1 326 81.6
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 1.5e-160 569.7 327 83.5
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 1.9e-160 569.3 326 82.2
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 7.2e-160 567.4 318 83.3
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 9.4e-160 567.0 329 81.5
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 1.2e-159 566.6 310 84.8
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 1.2e-159 566.6 314 84.4
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 2.3e-158 562.4 315 82.9
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 8.8e-158 560.5 317 83.0
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 9.7e-157 557.0 321 81.6
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 9.7e-157 557.0 320 79.7
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 1.3e-156 556.6 321 80.4
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 2.2e-156 555.8 318 82.4
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 3.7e-156 555.1 322 80.1
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 1.6e-154 549.7 318 80.5
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 8.5e-153 543.9 317 80.1
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 8.5e-153 543.9 347 76.4
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 2.5e-152 542.3 317 79.8
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.2e-149 533.5 316 81.0
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 3.1e-147 525.4 319 76.5
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 3.5e-146 521.9 292 82.2
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 7.7e-146 520.8 275 87.3
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 1.7e-145 519.6 279 86.4
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 1.7e-145 519.6 328 74.1
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 1.9e-144 516.2 313 75.7
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 7.2e-144 514.2 308 76.6
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 4.7e-143 511.5 271 87.5
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 1.3e-137 493.4 321 71.3
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 1.2e-133 480.3 333 72.1
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 3.7e-132 475.3 323 67.8
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 3.7e-132 475.3 323 67.8
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 5.4e-131 471.5 308 69.2
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 3.0e-129 465.7 251 83.7
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.5e-128 462.6 305 70.2
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 3.0e-121 439.1 232 89.7
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 2.6e-117 426.0 307 62.9
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 9.6e-104 380.9 313 57.8
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 6.8e-102 374.8 244 71.3
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 2.4e-99 366.3 215 80.0
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 1.7e-89 333.6 322 50.9
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 2.3e-81 306.6 344 44.2
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 5.1e-73 278.9 372 41.4
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.7e-55 220.7 123 78.0
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 9.4e-35 151.8 82 90.2
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 3.1e-30 136.7 89 76.4
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-22 111.7 83 67.5
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 2.5e-19 100.5 68 69.1
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 3.4e-16 90.1 68 69.1
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 5.4e-14 82.8 47 78.7
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 1.0e-12 78.6 41 85.4
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 1.7e-12 77.8 42 78.6
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 3.7e-07 60.1 42 61.9


User provided reference genes

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