Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 2.1e-255 885.2 441 100.0
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 1.1e-216 756.5 440 85.7
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 8.6e-209 730.3 439 82.7
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 1.5e-208 729.6 435 82.5
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 4.7e-207 724.5 440 83.4
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 1.5e-205 719.5 440 81.4
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 7.6e-205 717.2 441 81.6
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 2.4e-203 712.2 441 79.8
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 2.5e-200 702.2 441 81.2
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 5.6e-200 701.0 436 79.8
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.3e-200 700.7 442 78.3
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 1.6e-199 699.5 442 79.0
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 2.4e-198 695.7 435 79.5
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 3.1e-198 695.3 448 77.7
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 2.0e-197 692.6 445 77.1
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 4.9e-196 688.0 439 77.7
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.9e-196 688.0 444 77.3
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 1.1e-195 686.8 446 76.7
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 1.1e-195 686.8 443 78.1
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 1.6e-194 682.9 438 76.7
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 2.7e-194 682.2 442 76.2
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 1.0e-193 680.2 448 77.0
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 1.3e-193 679.9 435 77.7
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.3e-193 679.9 443 76.5
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 5.1e-193 677.9 429 78.6
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 1.5e-192 676.4 438 76.5
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 1.5e-192 676.4 443 77.4
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 1.5e-192 676.4 446 76.5
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 3.3e-192 675.2 436 78.9
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 5.6e-192 674.5 435 78.4
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 2.8e-191 672.2 436 77.1
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.8e-191 672.2 444 76.4
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 3.6e-191 671.8 465 74.4
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 6.2e-191 671.0 437 76.7
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 6.2e-191 671.0 443 75.6
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 6.2e-191 671.0 440 76.1
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 8.1e-191 670.6 444 75.7
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 1.8e-190 669.5 441 74.4
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 3.4e-189 665.2 443 75.2
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 1.7e-188 662.9 435 76.8
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 2.9e-188 662.1 437 75.5
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 2.9e-188 662.1 435 76.1
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 7.1e-187 657.5 432 77.1
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 9.3e-187 657.1 447 74.5
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.6e-186 656.4 428 75.7
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 3.5e-186 655.2 437 74.8
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 6.0e-186 654.4 440 75.7
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 7.9e-186 654.1 443 74.0
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.3e-185 653.3 442 73.3
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 1.3e-185 653.3 448 73.9
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 2.3e-185 652.5 433 73.2
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 3.9e-185 651.7 435 77.2
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 5.1e-185 651.4 430 76.5
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 6.7e-185 651.0 429 75.8
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 6.7e-185 651.0 428 76.2
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 1.1e-184 650.2 444 75.0
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 1.9e-184 649.4 438 75.8
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 3.3e-184 648.7 445 73.3
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 4.3e-184 648.3 435 75.4
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.6e-184 647.9 435 73.3
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 1.3e-183 646.7 435 75.9
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.6e-183 646.4 436 73.2
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 2.1e-183 646.0 435 75.6
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 5.3e-182 641.3 438 73.7
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.2e-181 640.2 443 70.9
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 4.9e-180 634.8 447 71.8
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 4.9e-180 634.8 451 72.5
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.1e-179 633.6 461 70.5
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 5.5e-179 631.3 443 71.6
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 7.1e-179 630.9 444 71.8
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 2.1e-178 629.4 449 71.5
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 4.6e-178 628.2 447 71.6
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 7.9e-178 627.5 441 71.9
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 2.3e-177 625.9 434 72.4
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 6.7e-177 624.4 445 70.1
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 4.3e-176 621.7 433 71.1
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 5.6e-176 621.3 431 72.9
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 9.6e-176 620.5 431 73.8
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 1.1e-174 617.1 440 71.1
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 4.5e-173 611.7 499 64.9
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 4.9e-172 608.2 433 70.9
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 4.9e-172 608.2 433 70.9
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 6.5e-172 607.8 431 70.8
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 1.4e-171 606.7 433 70.9
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 1.4e-171 606.7 433 70.9
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 2.5e-171 605.9 445 69.4
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.9e-168 596.3 448 69.6
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 9.7e-168 594.0 368 78.8
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 8.2e-167 590.9 448 67.4
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 2.4e-166 589.3 452 67.5
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 1.3e-164 583.6 441 66.9
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 2.2e-164 582.8 434 69.4
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.4e-161 573.5 349 83.7
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 3.3e-160 568.9 441 65.5
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 2.8e-159 565.8 436 68.3
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 3.7e-159 565.5 443 66.4
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 1.8e-158 563.1 388 72.9
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.0e-153 547.4 343 79.3
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 8.2e-151 537.7 341 78.3
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 5.3e-150 535.0 439 64.0
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 8.5e-148 527.7 435 63.7
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 1.7e-143 513.5 445 61.3
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 9.1e-142 507.7 361 73.1
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 4.2e-139 498.8 348 73.9
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 7.0e-134 481.5 328 73.8
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 1.6e-133 480.3 609 47.1
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 1.4e-129 467.2 443 52.8
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 3.4e-128 462.6 436 53.7
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 1.0e-124 451.1 433 52.4
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 1.6e-122 443.7 297 75.1
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.8e-118 430.3 422 52.1
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 2.7e-93 346.7 314 55.1
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 7.3e-91 338.6 453 43.3
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.4e-89 334.3 209 79.4
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 3.0e-84 316.6 333 53.2
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 1.1e-83 314.7 272 62.1
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 7.3e-83 312.0 215 70.2
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.3e-51 206.8 157 64.3
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-43 181.8 205 50.2
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 4.5e-40 169.9 397 31.7
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 2.5e-38 164.1 122 65.6
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 8.2e-34 149.1 102 69.6
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 4.1e-25 120.2 91 64.8
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 3.8e-23 113.6 113 49.6
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 6.1e-21 106.3 99 51.5
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 5.7e-19 99.8 62 75.8
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 3.6e-13 80.5 64 59.4
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 9.8e-11 72.4 127 37.0
TPR.G32042 Trifolium pratense HOM05D006332 ORTHO05D034078 4.5e-08 63.5 40 80.0
Cpa.g.sc777.3 Carica papaya HOM05D006332 ORTHO05D034078 1.3e-07 62.0 38 81.6
FAN09G2993 Fragaria x ananassa HOM05D006332 ORTHO05D210550 2.5e-06 57.8 68 48.5


User provided reference genes

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