Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 0.0e+00 1128.2 578 100.0
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 9.6e-200 700.7 502 72.1
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 6.0e-194 681.4 485 74.2
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 2.9e-188 662.5 444 75.5
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 2.5e-187 659.4 435 76.1
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 1.2e-186 657.1 458 74.9
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 4.8e-183 645.2 443 73.4
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 9.3e-179 630.9 488 65.8
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 1.2e-178 630.6 462 68.2
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 2.7e-178 629.4 488 65.4
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 1.0e-177 627.5 488 65.0
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 8.7e-177 624.4 451 69.0
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 1.1e-176 624.0 439 69.5
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 2.5e-176 622.9 462 66.9
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 2.6e-173 612.8 458 68.6
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 1.3e-172 610.5 501 62.5
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 7.9e-170 601.3 491 63.1
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 1.5e-168 597.0 472 64.8
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 8.2e-167 591.3 441 67.1
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 1.8e-166 590.1 448 65.6
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.1e-166 589.3 454 64.3
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 1.1e-163 580.9 449 67.0
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 1.4e-163 580.5 461 65.3
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 1.1e-158 564.3 453 64.9
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.2e-152 544.3 449 61.5
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 7.5e-152 541.6 449 61.2
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.7e-151 540.4 449 61.2
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 3.7e-151 539.3 464 62.1
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 8.6e-140 501.5 347 74.1
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 1.0e-137 494.6 471 55.0
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 2.1e-106 390.6 444 45.9
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 4.4e-104 382.9 466 45.9
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 1.2e-101 374.8 479 43.4
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 2.7e-101 373.6 460 46.3
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 1.1e-99 368.2 418 49.3
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 7.3e-99 365.5 297 63.0
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 5.6e-91 339.3 238 68.9
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 6.9e-65 252.7 208 60.1
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 6.9e-65 252.7 237 52.3
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 6.9e-65 252.7 237 52.3
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.2e-63 247.7 215 60.5
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 5.0e-63 246.5 319 48.3
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 3.7e-58 230.3 179 64.8
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 2.6e-56 224.2 208 56.7
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.1e-54 218.8 165 66.7
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 3.6e-53 213.8 504 32.9
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 6.1e-53 213.0 179 63.1
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 6.7e-52 209.5 161 64.6
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.1e-51 208.8 161 65.2
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 7.4e-51 206.1 264 47.3
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.8e-50 203.4 161 64.0
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.4e-48 197.2 153 64.7
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 2.1e-45 188.0 146 64.4
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.7e-42 178.3 238 47.9
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.7e-39 168.3 121 68.6
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 3.8e-39 167.2 235 42.6
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.7e-37 160.2 159 54.1
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 8.8e-36 156.0 121 61.2
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.5e-35 155.2 121 61.2
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.2e-32 145.6 139 54.7
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 4.7e-29 133.7 172 49.4
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 8.8e-28 129.4 180 45.0
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.8e-26 124.4 115 57.4
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 1.1e-25 122.5 115 55.7
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.3e-22 110.9 121 48.8
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 9.5e-22 109.4 299 30.1
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 1.6e-21 108.6 319 32.6
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 2.3e-20 104.8 83 62.7
Nitab4.5_0001297g0080 Nicotiana tabacum HOM05D007982 ORTHO05D010255 3.0e-20 104.4 167 42.5
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 7.5e-19 99.8 72 62.5
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 1.1e-17 95.9 122 49.2
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 7.0e-17 93.2 88 48.9
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 3.8e-15 87.4 85 48.2
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 4.7e-13 80.5 165 36.4
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 6.1e-13 80.1 78 46.2
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 4.4e-11 73.9 64 56.2
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 6.4e-10 70.1 389 26.7
Nitab4.5_0005642g0050 Nicotiana tabacum HOM05D007982 ORTHO05D283853 1.0e-07 62.8 76 39.5
unitig_26.g9706 Utricularia gibba HOM05D005554 ORTHO05D007823 1.7e-07 62.0 380 24.7
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 5.0e-07 60.5 360 25.0
SalBow1G4020 Salvia bowleyana HOM05D005554 ORTHO05D007823 1.1e-06 59.3 359 24.5


User provided reference genes

Program Settings