Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 1.2e-135 486.5 248 100.0
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 1.8e-131 472.6 246 97.2
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 3.1e-131 471.9 246 96.7
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 2.0e-130 469.2 246 95.9
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 2.6e-130 468.8 245 95.5
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 1.7e-129 466.1 245 94.7
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 2.9e-129 465.3 246 95.5
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 2.9e-129 465.3 246 95.9
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 3.8e-129 464.9 243 95.9
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 5.0e-129 464.5 245 94.3
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 1.1e-128 463.4 246 94.3
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 2.5e-128 462.2 243 95.1
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 4.2e-128 461.5 246 93.9
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 4.2e-128 461.5 246 93.9
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 7.2e-128 460.7 246 93.9
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 7.2e-128 460.7 246 93.9
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 7.2e-128 460.7 246 93.9
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 9.4e-128 460.3 245 93.1
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 9.4e-128 460.3 246 92.3
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 9.4e-128 460.3 246 93.5
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 1.6e-127 459.5 246 93.9
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 2.1e-127 459.1 245 93.5
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 2.1e-127 459.1 245 93.5
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.1e-127 459.1 246 93.5
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.1e-127 459.1 246 93.5
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 2.7e-127 458.8 246 93.1
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 2.7e-127 458.8 245 93.1
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 3.6e-127 458.4 246 93.5
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 3.6e-127 458.4 245 93.9
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 4.7e-127 458.0 246 92.3
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 6.1e-127 457.6 245 93.5
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 6.1e-127 457.6 245 93.9
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 6.1e-127 457.6 245 93.5
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 7.9e-127 457.2 246 91.5
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 7.9e-127 457.2 245 93.1
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 1.0e-126 456.8 246 93.1
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 1.0e-126 456.8 246 93.1
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 1.0e-126 456.8 244 94.3
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 1.0e-126 456.8 245 93.5
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 1.4e-126 456.4 246 93.5
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 1.4e-126 456.4 245 92.2
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 2.3e-126 455.7 245 92.7
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 2.3e-126 455.7 245 93.1
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 2.3e-126 455.7 247 94.3
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 3.0e-126 455.3 244 93.9
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 3.0e-126 455.3 245 93.1
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 3.9e-126 454.9 248 91.5
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 6.7e-126 454.1 243 93.0
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 8.8e-126 453.8 245 92.7
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 8.8e-126 453.8 245 92.7
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 8.8e-126 453.8 244 93.4
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 1.1e-125 453.4 246 91.5
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 1.5e-125 453.0 246 92.3
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 1.5e-125 453.0 246 91.9
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 1.5e-125 453.0 250 91.6
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 2.0e-125 452.6 245 92.2
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 2.0e-125 452.6 245 92.2
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 2.0e-125 452.6 248 90.3
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 2.6e-125 452.2 245 91.0
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 2.6e-125 452.2 245 92.2
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 4.4e-125 451.4 246 91.5
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 5.7e-125 451.1 245 91.4
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 5.7e-125 451.1 245 91.8
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 90.6
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 7.4e-125 450.7 248 91.1
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 9.7e-125 450.3 248 89.9
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 9.7e-125 450.3 245 91.4
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 9.7e-125 450.3 245 91.4
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 9.7e-125 450.3 245 91.4
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 9.7e-125 450.3 245 91.4
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 1.3e-124 449.9 248 90.7
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 1.3e-124 449.9 245 91.4
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 1.3e-124 449.9 245 91.4
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 1.3e-124 449.9 246 92.7
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 1.7e-124 449.5 246 90.7
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 2.2e-124 449.1 245 92.2
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 2.2e-124 449.1 246 90.7
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 2.2e-124 449.1 245 92.2
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 2.2e-124 449.1 246 91.5
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 2.8e-124 448.7 245 90.6
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 3.7e-124 448.4 246 91.9
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 3.7e-124 448.4 246 91.9
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 3.7e-124 448.4 245 91.0
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 3.7e-124 448.4 245 91.0
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 4.8e-124 448.0 246 91.5
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 6.3e-124 447.6 246 90.2
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 6.3e-124 447.6 246 90.2
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 6.3e-124 447.6 245 91.0
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 8.2e-124 447.2 246 90.2
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 8.2e-124 447.2 245 89.8
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 8.2e-124 447.2 246 90.2
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 8.2e-124 447.2 246 90.7
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 1.1e-123 446.8 246 89.8
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 1.1e-123 446.8 246 89.8
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 1.8e-123 446.0 245 90.6
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 2.4e-123 445.7 246 91.5
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 2.4e-123 445.7 246 91.5
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 3.1e-123 445.3 246 90.2
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 3.1e-123 445.3 247 90.3
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 4.1e-123 444.9 246 89.8
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 1.2e-122 443.4 245 89.8
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 1.2e-122 443.4 245 89.4
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 1.2e-122 443.4 245 89.0
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 1.2e-122 443.4 245 89.8
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 1.5e-122 443.0 246 91.1
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 3.4e-122 441.8 270 84.8
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 4.5e-122 441.4 245 89.0
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 4.5e-122 441.4 246 89.8
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 5.9e-122 441.0 245 89.8
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 5.9e-122 441.0 235 94.0
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 7.7e-122 440.7 247 88.7
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 7.7e-122 440.7 245 89.0
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 1.0e-121 440.3 245 89.8
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 2.2e-121 439.1 246 89.8
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 1.4e-120 436.4 245 88.2
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 5.5e-120 434.5 285 80.0
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 7.2e-120 434.1 246 90.2
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 8.0e-119 430.6 247 86.6
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 1.0e-118 430.3 263 84.0
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 6.7e-118 427.6 247 86.6
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 2.0e-117 426.0 247 86.2
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 2.0e-117 426.0 290 77.2
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 1.7e-116 422.9 247 85.0
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 2.8e-116 422.2 247 85.8
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 1.8e-115 419.5 246 87.0
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 1.6e-114 416.4 333 67.9
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 5.0e-113 411.4 252 82.9
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 5.5e-112 407.9 253 79.8
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 3.6e-111 405.2 379 59.6
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 3.0e-110 402.1 254 79.1
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 8.8e-110 400.6 245 80.8
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 3.3e-109 398.7 252 79.8
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 9.7e-109 397.1 210 93.3
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 9.7e-109 397.1 210 93.3
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 1.3e-108 396.7 222 89.6
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 2.2e-108 396.0 252 78.2
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 2.8e-108 395.6 265 79.2
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 1.4e-107 393.3 254 76.8
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 7.2e-104 380.9 213 89.2
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 6.1e-103 377.9 360 60.0
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 8.9e-94 347.4 245 73.5
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 1.1e-91 340.5 246 75.6
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 1.4e-91 340.1 198 90.9
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 1.1e-88 330.5 247 72.1
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 3.7e-84 315.5 179 89.9
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.2e-82 310.5 164 92.7
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 1.0e-81 307.4 172 91.3
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 2.3e-81 306.2 172 91.3
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 4.7e-79 298.5 167 87.4
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 3.9e-73 278.9 278 56.5
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 2.6e-61 239.6 242 49.2
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 1.6e-58 230.3 138 81.9
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 6.0e-50 201.8 232 45.3
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 7.3e-48 194.9 246 52.0
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 2.4e-46 189.9 247 44.1
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 3.1e-46 189.5 102 91.2
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 2.1e-42 176.8 96 89.6
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 3.3e-40 169.5 199 54.3
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 9.0e-38 161.4 164 56.7
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 3.3e-32 142.9 139 58.3
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 3.1e-30 136.3 82 81.7
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 4.5e-29 132.5 82 82.9
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 4.9e-28 129.0 87 75.9
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 8.4e-28 128.3 84 75.0
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 3.5e-26 122.9 212 41.5
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 3.9e-25 119.4 232 35.8
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 2.2e-20 103.6 101 50.5
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 2.3e-17 93.6 57 82.5
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 7.4e-16 88.6 47 87.2
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 9.7e-16 88.2 51 82.4
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 9.7e-16 88.2 74 67.6
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 6.3e-15 85.5 79 62.0
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 8.2e-15 85.1 51 84.3
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 5.3e-14 82.4 52 86.5
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 2.2e-12 77.0 106 50.9
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 1.1e-11 74.7 90 54.4
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 9.4e-11 71.6 38 86.8
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 1.8e-09 67.4 45 80.0
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 8.8e-09 65.1 90 51.1
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 2.2e-07 60.5 34 79.4
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 2.2e-07 60.5 34 79.4
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 3.7e-07 59.7 87 48.3
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 6.3e-07 58.9 34 76.5


User provided reference genes

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