Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07377 Davidia involucrata HOM05D000159 ORTHO05D182922 1.1e-62 243.0 112 100.0
Dinv33162 Davidia involucrata HOM05D000159 ORTHO05D002729 4.8e-23 111.3 99 61.6
Dinv12094 Davidia involucrata HOM05D000159 ORTHO05D002729 4.2e-19 98.2 99 56.6
Actinidia21351 Actinidia chinensis HOM05D000159 ORTHO05D002729 8.0e-18 94.0 99 51.5
Actinidia06397 Actinidia chinensis HOM05D000159 ORTHO05D002729 1.8e-17 92.8 99 50.5
Hma1.2p1_0484F.1_g162900 Hydrangea macrophylla HOM05D000159 ORTHO05D002729 5.7e-16 87.8 79 62.0
CSS0037275 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 1.3e-15 86.7 91 54.9
Lj1C10G2 Lonicera japonica HOM05D000159 ORTHO05D002729 2.2e-15 85.9 78 59.0
Nitab4.5_0000222g0290 Nicotiana tabacum HOM05D000159 ORTHO05D002729 6.3e-15 84.3 99 50.5
SalBow6G7168 Salvia bowleyana HOM05D000159 ORTHO05D002729 6.3e-15 84.3 99 49.5
Rhsim13G0000500 Rhododendron simsii HOM05D000159 ORTHO05D002729 8.2e-15 84.0 99 49.5
SGA_v2.0_scaffold80G25685 Striga asiatica HOM05D000159 ORTHO05D002729 8.2e-15 84.0 99 47.5
Peaxi162Scf00919g00310 Petunia axillaris HOM05D000159 ORTHO05D002729 1.4e-14 83.2 99 49.5
CAN.G100.32 Capsicum annuum HOM05D000159 ORTHO05D002729 5.3e-14 81.3 99 49.5
Nitab4.5_0002994g0100 Nicotiana tabacum HOM05D000159 ORTHO05D002729 7.0e-14 80.9 79 59.5
MSTRG.18064 Avicennia marina HOM05D000159 ORTHO05D002729 9.1e-14 80.5 107 44.9
Oeu002573.1 Olea europaea HOM05D000159 ORTHO05D002729 3.5e-13 78.6 99 46.5
TWI59G0684 Tripterygium wilfordii HOM05D000159 ORTHO05D002729 4.5e-13 78.2 98 49.0
Nitab4.5_0003324g0070 Nicotiana tabacum HOM05D000159 ORTHO05D002729 5.9e-13 77.8 88 53.4
Oeu034899.1 Olea europaea HOM05D000159 ORTHO05D002729 7.7e-13 77.4 99 46.5
Thecc.01G323200 Theobroma cacao HOM05D000159 ORTHO05D002729 1.0e-12 77.0 100 48.0
vmacro02366 Vaccinium macrocarpon HOM05D000159 ORTHO05D002729 1.0e-12 77.0 99 47.5
Peaxi162Scf00058g02017 Petunia axillaris HOM05D000159 ORTHO05D002729 2.2e-12 75.9 77 55.8
Nitab4.5_0000363g0110 Nicotiana tabacum HOM05D000159 ORTHO05D002729 2.9e-12 75.5 77 55.8
Lj5g0024810 Lotus japonicus HOM05D000159 ORTHO05D002729 5.0e-12 74.7 98 44.9
Oeu038065.1 Olea europaea HOM05D000159 ORTHO05D002729 5.0e-12 74.7 99 44.4
TAR633G1629 Trochodendron aralioides HOM05D000159 ORTHO05D002729 5.0e-12 74.7 98 48.0
Gohir.A11G103700 Gossypium hirsutum HOM05D000159 ORTHO05D002729 6.5e-12 74.3 100 47.0
PGSC0003DMG400005196 Solanum tuberosum HOM05D000159 ORTHO05D002729 8.5e-12 73.9 79 55.7
Glyma.02G008600 Glycine max HOM05D000159 ORTHO05D002729 1.1e-11 73.6 98 43.9
RcHm_v2.0_Chr4g0427341 Rosa chinensis HOM05D000159 ORTHO05D002729 1.1e-11 73.6 95 45.3
Haze_00782 Corylus avellana HOM05D000159 ORTHO05D002729 1.5e-11 73.2 94 44.7
Duzib133G0518 Durio zibethinus HOM05D000159 ORTHO05D002729 1.5e-11 73.2 100 44.0
Duzib138G1731 Durio zibethinus HOM05D000159 ORTHO05D002729 1.5e-11 73.2 100 46.0
Lalb_Chr06g0167101 Lupinus albus HOM05D000159 ORTHO05D002729 1.5e-11 73.2 98 45.9
TPR.G4116 Trifolium pratense HOM05D000159 ORTHO05D002729 1.5e-11 73.2 98 45.9
Gohir.D11G108100 Gossypium hirsutum HOM05D000159 ORTHO05D002729 1.9e-11 72.8 100 46.0
Gorai.007G116100 Gossypium raimondii HOM05D000159 ORTHO05D002729 1.9e-11 72.8 100 46.0
Solyc01g068100.4 Solanum lycopersicum HOM05D000159 ORTHO05D002729 1.9e-11 72.8 79 54.4
Cc01_g21870 Coffea canephora HOM05D000159 ORTHO05D002729 2.5e-11 72.4 77 53.2
Haze_00787 Corylus avellana HOM05D000159 ORTHO05D002729 2.5e-11 72.4 94 44.7
Eucgr.A01019 Eucalyptus grandis HOM05D000159 ORTHO05D002729 2.5e-11 72.4 98 44.9
Medtr1g086250 Medicago truncatula HOM05D000159 ORTHO05D002729 2.5e-11 72.4 95 45.3
Gorai.008G135700 Gossypium raimondii HOM05D000159 ORTHO05D002729 3.2e-11 72.0 100 45.0
Psat6g160520 Pisum sativum HOM05D000159 ORTHO05D002729 3.2e-11 72.0 95 46.3
Sopen01g030050 Solanum pennellii HOM05D000159 ORTHO05D002729 3.2e-11 72.0 79 54.4
TWI14G0396 Tripterygium wilfordii HOM05D000159 ORTHO05D002729 3.2e-11 72.0 98 46.9
Atru.chr4.3133 Acer truncatum HOM05D000159 ORTHO05D002729 4.2e-11 71.6 94 47.9
Haze_05125 Corylus avellana HOM05D000159 ORTHO05D002729 4.2e-11 71.6 94 52.1
Nn3g21895 Nelumbo nucifera HOM05D000159 ORTHO05D002729 5.5e-11 71.2 90 50.0
VMungo0720G0292 Vigna mungo HOM05D000159 ORTHO05D002729 5.5e-11 71.2 98 43.9
EL10Ac5g10644 Beta vulgaris HOM05D000159 ORTHO05D002729 7.2e-11 70.9 99 45.5
arahy.Tifrunner.gnm1.ann1.5CG51V Arachis hypogaea HOM05D000159 ORTHO05D002729 1.2e-10 70.1 78 52.6
Ciclev10018697m.g Citrus clementina HOM05D000159 ORTHO05D002729 1.2e-10 70.1 98 44.9
FAN17G2719 Fragaria x ananassa HOM05D000159 ORTHO05D002729 1.2e-10 70.1 95 44.2
FvH4_4g21420 Fragaria vesca HOM05D000159 ORTHO05D002729 1.6e-10 69.7 95 44.2
Gohir.D12G124700 Gossypium hirsutum HOM05D000159 ORTHO05D002729 1.6e-10 69.7 100 44.0
PGR042G3374 Punica granatum HOM05D000159 ORTHO05D002729 1.6e-10 69.7 98 44.9
GSVIVG01017678001 Vitis vinifera HOM05D000159 ORTHO05D002729 1.6e-10 69.7 97 43.3
Cfa021286 Carpinus fangiana HOM05D000159 ORTHO05D002729 2.1e-10 69.3 94 42.6
COL.COLO4_23150 Corchorus olitorius HOM05D000159 ORTHO05D002729 2.1e-10 69.3 100 45.0
Gohir.A02G057700 Gossypium hirsutum HOM05D000159 ORTHO05D002729 2.1e-10 69.3 78 52.6
QL06p014060 Quercus lobata HOM05D000159 ORTHO05D002729 2.1e-10 69.3 98 44.9
Phvul.007G210600 Phaseolus vulgaris HOM05D000159 ORTHO05D002729 2.7e-10 68.9 98 43.9
TAR362G1270 Trochodendron aralioides HOM05D000159 ORTHO05D002729 2.7e-10 68.9 98 44.9
Duzib212G0746 Durio zibethinus HOM05D000159 ORTHO05D002729 3.6e-10 68.6 77 48.1
Gohir.A12G120900 Gossypium hirsutum HOM05D000159 ORTHO05D002729 4.7e-10 68.2 100 44.0
CiPaw.07G123900 Carya illinoinensis HOM05D000159 ORTHO05D002729 6.1e-10 67.8 79 54.4
Gohir.A08G037400 Gossypium hirsutum HOM05D000159 ORTHO05D002729 6.1e-10 67.8 100 44.0
Gorai.005G071400 Gossypium raimondii HOM05D000159 ORTHO05D002729 6.1e-10 67.8 78 51.3
Lalb_Chr21g0309801 Lupinus albus HOM05D000159 ORTHO05D002729 6.1e-10 67.8 78 51.3
Manes.05G010400 Manihot esculenta HOM05D000159 ORTHO05D002729 6.1e-10 67.8 98 48.0
Medtr7g110320 Medicago truncatula HOM05D000159 ORTHO05D002729 6.1e-10 67.8 98 42.9
Atru.chr5.895 Acer truncatum HOM05D000159 ORTHO05D002729 8.0e-10 67.4 97 43.3
CSS0037326 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 8.0e-10 67.4 107 40.2
CiPaw.01G130200 Carya illinoinensis HOM05D000159 ORTHO05D002729 8.0e-10 67.4 98 43.9
FAN07G1875 Fragaria x ananassa HOM05D000159 ORTHO05D002729 8.0e-10 67.4 79 50.6
FAN12G2890 Fragaria x ananassa HOM05D000159 ORTHO05D002729 8.0e-10 67.4 79 50.6
Dinv18029 Davidia involucrata HOM05D000159 ORTHO05D002729 1.0e-09 67.0 107 42.1
Lalb_Chr02g0147041 Lupinus albus HOM05D000159 ORTHO05D002729 1.0e-09 67.0 97 44.3
Rhsim04G0247600 Rhododendron simsii HOM05D000159 ORTHO05D002729 1.0e-09 67.0 107 38.3
vmacro08005 Vaccinium macrocarpon HOM05D000159 ORTHO05D002729 1.0e-09 67.0 108 40.7
VMungo1215G1958 Vigna mungo HOM05D000159 ORTHO05D002729 1.0e-09 67.0 93 41.9
Dinv29517 Davidia involucrata HOM05D000159 ORTHO05D002729 1.4e-09 66.6 107 42.1
Gohir.D02G063500 Gossypium hirsutum HOM05D000159 ORTHO05D002729 1.4e-09 66.6 78 50.0
Ah.02g112670 Amaranthus hybridus HOM05D000159 ORTHO05D002729 1.8e-09 66.2 99 42.4
Ca_10248_v3 Cicer arietinum L. HOM05D000159 ORTHO05D002729 1.8e-09 66.2 76 48.7
Cpa.g.sc181.11 Carica papaya HOM05D000159 ORTHO05D002729 2.3e-09 65.9 98 40.8
Cfa004887 Carpinus fangiana HOM05D000159 ORTHO05D002729 2.3e-09 65.9 94 48.9
Glyma.07G234200 Glycine max HOM05D000159 ORTHO05D002729 2.3e-09 65.9 93 43.0
Phvul.003G120700 Phaseolus vulgaris HOM05D000159 ORTHO05D002729 2.3e-09 65.9 93 43.0
CSS0037020 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 3.0e-09 65.5 107 41.1
Glyma.17G039600 Glycine max HOM05D000159 ORTHO05D002729 3.0e-09 65.5 93 43.0
Gohir.D08G047700 Gossypium hirsutum HOM05D000159 ORTHO05D002729 3.0e-09 65.5 100 44.0
Gorai.004G047200 Gossypium raimondii HOM05D000159 ORTHO05D002729 3.0e-09 65.5 100 44.0
Thecc.04G311800 Theobroma cacao HOM05D000159 ORTHO05D002729 3.0e-09 65.5 78 50.0
TAR365G1217 Trochodendron aralioides HOM05D000159 ORTHO05D002729 3.0e-09 65.5 98 41.8
CiPaw.02G070500 Carya illinoinensis HOM05D000159 ORTHO05D002729 4.0e-09 65.1 94 43.6
Duzib211G0455 Durio zibethinus HOM05D000159 ORTHO05D002729 4.0e-09 65.1 99 41.4
Lalb_Chr08g0233051 Lupinus albus HOM05D000159 ORTHO05D002729 4.0e-09 65.1 97 41.2
CSS0001928 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 5.2e-09 64.7 107 41.1
Psat3g018160 Pisum sativum HOM05D000159 ORTHO05D002729 5.2e-09 64.7 98 40.8
Sabra08G0074600 Salix brachista HOM05D000159 ORTHO05D002729 5.2e-09 64.7 98 42.9
Potri.008G098600 Populus trichocarpa HOM05D000159 ORTHO05D002729 6.8e-09 64.3 98 42.9
Prupe.1G106500 Prunus persica HOM05D000159 ORTHO05D002729 6.8e-09 64.3 101 41.6
GSVIVG01028208001 Vitis vinifera HOM05D000159 ORTHO05D002729 6.8e-09 64.3 97 44.3
AUR62011728 Chenopodium quinoa HOM05D000159 ORTHO05D002729 8.8e-09 63.9 79 51.9
Sc17g0000130 Simmondsia chinensis HOM05D000159 ORTHO05D002729 1.2e-08 63.5 94 43.6
Cpa.g.sc146.32 Carica papaya HOM05D000159 ORTHO05D002729 1.5e-08 63.2 98 42.9
Potri.014G114300 Populus trichocarpa HOM05D000159 ORTHO05D002729 1.5e-08 63.2 98 44.9
TAR636G1610 Trochodendron aralioides HOM05D000159 ORTHO05D002729 1.5e-08 63.2 94 42.6
AUR62002563 Chenopodium quinoa HOM05D000159 ORTHO05D002729 2.0e-08 62.8 102 42.2
Glyma.09G082000 Glycine max HOM05D000159 ORTHO05D002729 2.0e-08 62.8 97 38.1
Lj1g0013691 Lotus japonicus HOM05D000159 ORTHO05D002729 2.0e-08 62.8 78 50.0
Lj6g0009513 Lotus japonicus HOM05D000159 ORTHO05D002729 2.6e-08 62.4 97 41.2
Potri.010G154000 Populus trichocarpa HOM05D000159 ORTHO05D002729 2.6e-08 62.4 98 42.9
EL10Ac3g06264 Beta vulgaris HOM05D000159 ORTHO05D002729 3.4e-08 62.0 98 42.9
Glyma.15G190200 Glycine max HOM05D000159 ORTHO05D002729 3.4e-08 62.0 97 39.2
QL12p034448 Quercus lobata HOM05D000159 ORTHO05D002729 3.4e-08 62.0 78 53.8
Lj4g0017967 Lotus japonicus HOM05D000159 ORTHO05D002729 5.7e-08 61.2 97 40.2
Potri.002G188700 Populus trichocarpa HOM05D000159 ORTHO05D002729 5.7e-08 61.2 77 51.9
Sed0010875 Sechium edule HOM05D000159 ORTHO05D002729 5.7e-08 61.2 74 51.4
Hund12248 Selenicereus undatus HOM05D000159 ORTHO05D002729 5.7e-08 61.2 65 55.4
VMungo1309G1463 Vigna mungo HOM05D000159 ORTHO05D002729 5.7e-08 61.2 92 39.1
Ca_02369_v3 Cicer arietinum L. HOM05D000159 ORTHO05D002729 7.5e-08 60.8 93 39.8
Sabra02G0166600 Salix brachista HOM05D000159 ORTHO05D002729 7.5e-08 60.8 78 52.6
Sabra10G0118600 Salix brachista HOM05D000159 ORTHO05D002729 7.5e-08 60.8 79 48.1
TPR.G3043 Trifolium pratense HOM05D000159 ORTHO05D002729 7.5e-08 60.8 94 40.4
EL10Ac4g09048 Beta vulgaris HOM05D000159 ORTHO05D002729 9.8e-08 60.5 78 42.3
FAN07G2474 Fragaria x ananassa HOM05D000159 ORTHO05D002729 9.8e-08 60.5 100 40.0
FAN12G3930 Fragaria x ananassa HOM05D000159 ORTHO05D002729 9.8e-08 60.5 100 40.0
MD16G1137600 Malus domestica HOM05D000159 ORTHO05D002729 9.8e-08 60.5 98 41.8
Manes.03G211200 Manihot esculenta HOM05D000159 ORTHO05D002729 9.8e-08 60.5 98 37.8
Phvul.009G219200 Phaseolus vulgaris HOM05D000159 ORTHO05D002729 9.8e-08 60.5 92 38.0
RcHm_v2.0_Chr4g0427351 Rosa chinensis HOM05D000159 ORTHO05D002729 9.8e-08 60.5 100 40.0
DCAR_002547 Daucus carota HOM05D000159 ORTHO05D002729 1.3e-07 60.1 97 40.2
Lj6C699T17 Lonicera japonica HOM05D000159 ORTHO05D002729 1.3e-07 60.1 97 41.2
Sed0026865 Sechium edule HOM05D000159 ORTHO05D002729 1.3e-07 60.1 99 43.4
TPR.G25933 Trifolium pratense HOM05D000159 ORTHO05D002729 1.7e-07 59.7 79 45.6
CSS0019036 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 2.2e-07 59.3 107 40.2
CSS0024125 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 2.2e-07 59.3 107 40.2
MELO3C012909.2 Cucumis melo HOM05D000159 ORTHO05D002729 2.2e-07 59.3 98 42.9
FAN17G0146 Fragaria x ananassa HOM05D000159 ORTHO05D002729 2.8e-07 58.9 100 39.0
CsaV3_3G031570 Cucumis sativus L. HOM05D000159 ORTHO05D002729 3.7e-07 58.5 98 41.8
Nn4g25403 Nelumbo nucifera HOM05D000159 ORTHO05D002729 3.7e-07 58.5 90 45.6
arahy.Tifrunner.gnm1.ann1.W095Z9 Arachis hypogaea HOM05D000159 ORTHO05D002729 4.8e-07 58.2 92 41.3
arahy.Tifrunner.gnm1.ann1.XS47FH Arachis hypogaea HOM05D000159 ORTHO05D002729 4.8e-07 58.2 92 41.3
CANSAT25G1789 Cannabis sativa HOM05D000159 ORTHO05D002729 4.8e-07 58.2 78 51.3
AUR62029983 Chenopodium quinoa HOM05D000159 ORTHO05D002729 4.8e-07 58.2 98 40.8
ClCG10G011820 Citrullus lanatus HOM05D000159 ORTHO05D002729 4.8e-07 58.2 78 51.3
Medtr2g046550 Medicago truncatula HOM05D000159 ORTHO05D002729 4.8e-07 58.2 77 45.5
Lalb_Chr12g0200621 Lupinus albus HOM05D000159 ORTHO05D002729 6.3e-07 57.8 77 45.5
MBI19_g32725_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D002729 6.3e-07 57.8 97 39.2
Ciclev10004227m.g Citrus clementina HOM05D000159 ORTHO05D002729 8.3e-07 57.4 78 46.2
MD13G1141300 Malus domestica HOM05D000159 ORTHO05D002729 8.3e-07 57.4 99 38.4
Nitab4.5_0004298g0020 Nicotiana tabacum HOM05D000159 ORTHO05D002729 8.3e-07 57.4 64 53.1
Sabra14G0084400 Salix brachista HOM05D000159 ORTHO05D002729 8.3e-07 57.4 78 51.3
Ah.11g045830 Amaranthus hybridus HOM05D000159 ORTHO05D002729 1.1e-06 57.0 79 45.6
AUR62029984 Chenopodium quinoa HOM05D000159 ORTHO05D002729 1.1e-06 57.0 97 39.2
DCAR_026953 Daucus carota HOM05D000159 ORTHO05D002729 1.4e-06 56.6 97 40.2
Actinidia18503 Actinidia chinensis HOM05D000159 ORTHO05D002729 1.8e-06 56.2 88 43.2
ATR0796G210 Amborella trichopoda HOM05D000159 ORTHO05D002729 1.8e-06 56.2 77 45.5
MD16G1137700 Malus domestica HOM05D000159 ORTHO05D002729 1.8e-06 56.2 99 39.4
Manes.01G233400 Manihot esculenta HOM05D000159 ORTHO05D002729 1.8e-06 56.2 77 48.1
Prupe.1G106600 Prunus persica HOM05D000159 ORTHO05D002729 1.8e-06 56.2 99 38.4
CARHR170330 Cardamine hirsuta HOM05D000159 ORTHO05D002729 3.1e-06 55.5 77 45.5
PSO761G0665 Papaver somniferum HOM05D000159 ORTHO05D002729 3.1e-06 55.5 97 40.2
Peaxi162Scf00126g01131 Petunia axillaris HOM05D000159 ORTHO05D002729 3.1e-06 55.5 74 47.3
Nitab4.5_0000225g0020 Nicotiana tabacum HOM05D000159 ORTHO05D002729 5.4e-06 54.7 64 51.6
MD13G1141400 Malus domestica HOM05D000159 ORTHO05D002729 7.0e-06 54.3 99 38.4
Psat1g018120 Pisum sativum HOM05D000159 ORTHO05D002729 9.1e-06 53.9 77 42.9
Hund11631 Selenicereus undatus HOM05D000159 ORTHO05D002729 9.1e-06 53.9 97 39.2


User provided reference genes

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