Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 2.3e-95 352.4 206 100.0
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 2.0e-67 259.6 203 68.5
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 4.5e-67 258.5 205 68.8
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 7.9e-64 247.7 203 66.5
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 5.1e-63 245.0 205 68.8
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 2.0e-62 243.0 205 71.2
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 2.6e-62 242.7 196 74.0
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 3.1e-60 235.7 204 64.2
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 1.5e-59 233.4 206 63.6
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 2.6e-59 232.6 205 65.4
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 2.2e-58 229.6 204 63.2
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 1.0e-55 220.7 204 60.3
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 1.3e-53 213.8 204 58.3
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 1.7e-53 213.4 200 59.5
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 3.7e-53 212.2 202 58.4
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 3.1e-52 209.1 204 63.2
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 4.1e-52 208.8 204 56.9
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 7.0e-52 208.0 204 56.4
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 7.7e-51 204.5 204 54.4
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 8.5e-50 201.1 204 53.4
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 2.5e-49 199.5 203 54.7
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 4.2e-49 198.7 204 52.0
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 7.2e-49 198.0 203 64.5
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 1.6e-48 196.8 203 52.7
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 2.7e-48 196.1 172 61.6
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 3.6e-48 195.7 203 61.6
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 6.1e-48 194.9 205 53.2
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 6.1e-48 194.9 203 61.6
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 8.0e-48 194.5 204 62.3
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.4e-47 193.7 172 61.0
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 1.4e-47 193.7 172 61.0
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 1.8e-47 193.4 172 61.0
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 3.0e-47 192.6 203 63.5
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 3.3e-46 189.1 172 60.5
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 5.7e-46 188.3 201 59.7
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.3e-45 187.2 205 52.2
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 8.2e-45 184.5 205 49.3
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.4e-44 183.7 217 48.8
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 1.8e-44 183.3 205 49.3
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 1.8e-44 183.3 172 58.1
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 2.4e-44 183.0 172 57.6
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 9.1e-44 181.0 204 49.0
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 7.7e-43 177.9 172 58.1
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 5.0e-42 175.3 172 64.5
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 6.5e-42 174.9 172 54.7
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 8.5e-42 174.5 204 48.5
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 1.1e-41 174.1 266 48.5
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 9.4e-41 171.0 184 64.1
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.7e-40 169.5 231 51.5
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 2.3e-39 166.4 193 51.3
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 4.0e-39 165.6 169 51.5
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 5.2e-39 165.2 169 51.5
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 8.8e-39 164.5 169 52.7
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 2.0e-38 163.3 172 62.8
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 4.4e-38 162.2 178 51.7
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 2.2e-37 159.8 169 50.3
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 2.8e-37 159.5 169 56.8
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 6.3e-37 158.3 169 60.4
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 1.8e-36 156.8 169 58.0
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 5.4e-36 155.2 179 59.2
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 7.0e-36 154.8 204 47.5
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 1.6e-35 153.7 209 46.9
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 5.9e-35 151.8 178 46.6
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 2.3e-34 149.8 169 57.4
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 2.3e-34 149.8 169 57.4
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 3.8e-34 149.1 169 56.2
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 3.8e-34 149.1 169 56.2
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 3.8e-34 149.1 169 56.2
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 6.5e-34 148.3 169 52.1
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 1.1e-33 147.5 204 45.1
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 1.4e-31 140.6 129 58.9
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.3e-31 139.8 95 74.7
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.3e-31 139.8 95 74.7
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 2.8e-29 132.9 169 54.4
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 5.9e-27 125.2 110 65.5
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 6.1e-24 115.2 106 56.6
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 2.3e-23 113.2 201 37.8
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 8.3e-21 104.8 102 54.9
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 1.1e-20 104.4 201 40.8
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 3.5e-19 99.4 105 63.8
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 4.6e-19 99.0 106 52.8
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 8.6e-18 94.7 74 68.9
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 8.6e-18 94.7 74 68.9
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 4.7e-16 89.0 74 73.0
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 4.0e-15 85.9 104 47.1
Aa31LG8G5380 Aethionema arabicum HOM05D007696 ORTHO05D009719 6.8e-15 85.1 137 37.2
AL2G14840 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 4.3e-09 65.9 60 53.3
CSS0046903 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 1.8e-07 60.5 62 56.5
Lsat_1_v5_gn_9_67701 Lactuca sativa HOM05D007696 ORTHO05D009719 8.9e-07 58.2 71 47.9


User provided reference genes

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