Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 6.5e-145 517.3 251 100.0
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 9.2e-123 443.7 250 87.2
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 6.0e-122 441.0 250 86.4
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.5e-112 409.8 250 80.4
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 5.6e-112 407.9 249 79.9
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 6.2e-111 404.4 250 79.2
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 5.2e-110 401.4 250 77.6
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 8.9e-110 400.6 250 76.8
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.2e-109 400.2 250 77.2
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 2.6e-109 399.1 249 75.9
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 7.6e-109 397.5 250 78.0
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 9.9e-109 397.1 260 76.5
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 6.4e-108 394.4 250 77.6
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 6.4e-108 394.4 250 77.6
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 8.3e-108 394.0 250 77.2
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 1.1e-107 393.7 250 74.8
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 2.4e-107 392.5 250 75.6
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 6.6e-105 384.4 249 74.7
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 1.1e-104 383.6 250 73.6
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 1.9e-104 382.9 250 74.8
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 3.3e-104 382.1 250 72.4
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 7.3e-104 380.9 250 73.2
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 9.6e-104 380.6 250 72.8
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 1.2e-103 380.2 250 74.0
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 4.7e-103 378.3 250 72.4
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 1.1e-102 377.1 250 72.8
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 1.8e-102 376.3 250 73.6
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 2.4e-102 375.9 249 73.5
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 4.0e-102 375.2 250 72.4
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 6.8e-102 374.4 250 71.2
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 1.5e-101 373.2 250 72.0
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 1.5e-101 373.2 250 70.8
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 3.4e-101 372.1 250 71.6
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 3.4e-101 372.1 250 72.4
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 7.6e-101 370.9 250 70.8
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 1.3e-100 370.2 250 72.0
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 1.3e-100 370.2 250 72.4
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 3.8e-100 368.6 250 70.0
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 4.9e-100 368.2 249 71.9
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 6.4e-100 367.9 267 70.0
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.1e-99 367.1 250 70.0
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 1.1e-99 367.1 250 70.8
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.4e-99 366.7 250 74.8
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 1.9e-99 366.3 250 70.0
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 1.9e-99 366.3 250 70.8
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 4.2e-99 365.2 249 69.9
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 9.3e-99 364.0 249 70.7
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 1.6e-98 363.2 280 65.0
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.6e-98 363.2 250 69.6
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 2.1e-98 362.8 250 71.6
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 2.1e-98 362.8 250 70.0
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 7.8e-98 360.9 250 68.8
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 2.3e-97 359.4 250 69.2
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 3.0e-97 359.0 250 70.0
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 3.0e-97 359.0 250 69.2
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 3.9e-97 358.6 263 69.2
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 6.6e-97 357.8 250 69.6
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 1.1e-96 357.1 250 68.4
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.5e-96 356.7 250 67.6
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.9e-96 356.3 242 71.9
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 2.5e-96 355.9 255 69.0
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 4.3e-96 355.1 250 69.6
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 1.6e-95 353.2 250 68.0
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 2.1e-95 352.8 250 69.6
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 2.8e-95 352.4 250 68.4
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 6.2e-95 351.3 249 67.5
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 6.2e-95 351.3 250 68.8
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 1.1e-94 350.5 249 69.1
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 1.4e-94 350.1 251 67.3
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 2.6e-93 345.9 249 68.7
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 2.2e-92 342.8 250 66.4
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 6.4e-92 341.3 250 66.0
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 1.1e-91 340.5 249 65.9
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 3.2e-91 339.0 249 65.5
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 3.2e-91 339.0 249 65.9
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 5.4e-91 338.2 249 65.5
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 5.4e-91 338.2 249 65.1
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 7.1e-91 337.8 249 65.5
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 7.1e-91 337.8 249 65.9
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 9.3e-91 337.4 251 65.3
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 2.1e-90 336.3 250 64.0
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 2.7e-90 335.9 249 65.1
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 6.0e-90 334.7 249 65.5
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 1.0e-89 334.0 250 64.0
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 1.0e-89 334.0 249 65.1
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 9.6e-88 327.4 276 60.1
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 2.1e-87 326.2 250 64.0
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 3.6e-87 325.5 250 62.4
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 8.1e-87 324.3 184 80.4
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 9.0e-86 320.9 166 86.1
CDE09G0856 Ceratophyllum demersum HOM05D005844 ORTHO05D007203 1.2e-85 320.5 229 67.2
Lj7A600G48 Lonicera japonica HOM05D005844 ORTHO05D007203 2.6e-85 319.3 211 77.3
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 5.4e-83 311.6 272 58.5
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 2.1e-82 309.7 187 75.4
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 3.0e-81 305.8 211 72.0
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 5.1e-81 305.1 249 61.8
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 1.1e-80 303.9 250 61.6
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 5.6e-80 301.6 250 61.2
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 9.6e-80 300.8 216 64.4
Peaxi162Scf00129g01647 Petunia axillaris HOM05D005844 ORTHO05D007203 1.1e-78 297.4 211 70.1
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 4.0e-78 295.4 250 60.8
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 9.0e-78 294.3 184 71.7
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 9.0e-78 294.3 184 71.7
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 7.6e-77 291.2 250 57.6
SMO169G0126 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 7.6e-77 291.2 249 57.0
Lsat_1_v5_gn_1_11001 Lactuca sativa HOM05D005844 ORTHO05D007203 4.9e-76 288.5 203 71.9
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 4.2e-75 285.4 251 56.6
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 6.7e-73 278.1 248 53.6
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 3.7e-71 272.3 250 52.8
CARHR261450 Cardamine hirsuta HOM05D005844 ORTHO05D007203 8.2e-71 271.2 207 64.3
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 5.8e-69 265.0 254 58.7
CAN.G473.16 Capsicum annuum HOM05D005844 ORTHO05D007203 1.1e-67 260.8 191 68.1
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 1.2e-66 257.3 250 52.8
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 3.1e-62 242.7 186 63.4
vmacro09039 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 2.2e-55 219.9 189 61.4
MCO16G365 Micromonas commoda HOM05D005844 ORTHO05D007203 3.7e-55 219.2 250 47.2
Atru.chr6.2417 Acer truncatum HOM05D005844 ORTHO05D007203 4.4e-48 195.7 151 66.9
SHI16461 Sapria himalayana HOM05D005844 ORTHO05D007203 3.7e-47 192.6 337 36.8
TPR.G1078 Trifolium pratense HOM05D005844 ORTHO05D007203 2.0e-45 186.8 109 73.4
Cre07.g323450 Chlamydomonas reinhardtii HOM05D005844 ORTHO05D007203 1.1e-43 181.0 262 38.5
TPR.G11046 Trifolium pratense HOM05D005844 ORTHO05D007203 1.2e-42 177.6 108 70.4
TPR.G35964 Trifolium pratense HOM05D005844 ORTHO05D007203 6.7e-41 171.8 141 64.5
TAR629G1250 Trochodendron aralioides HOM05D005844 ORTHO05D007203 1.3e-39 167.5 155 56.8
PRCOL_00001214 Prasinoderma coloniale HOM05D005844 ORTHO05D007203 1.1e-38 164.5 263 38.8
SMO202G0011 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 1.5e-32 144.1 116 56.9
Atru.chr2.3681 Acer truncatum HOM05D005844 ORTHO05D007203 1.4e-30 137.5 106 67.0
BolC4t27198H Brassica oleracea HOM05D005844 ORTHO05D007203 1.8e-30 137.1 125 57.6
QL12p001810 Quercus lobata HOM05D005844 ORTHO05D007203 2.4e-30 136.7 72 84.7
Cfa024741 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.9e-27 127.1 332 30.4
Rhsim10G0015100 Rhododendron simsii HOM05D014363 ORTHO05D019497 4.2e-27 125.9 105 62.9
SEGI_32629 Sequoiadendron giganteum HOM05D005844 ORTHO05D007203 1.1e-19 101.3 109 49.5
AUR62043289 Chenopodium quinoa HOM05D005844 ORTHO05D007203 6.8e-17 92.0 105 48.6
CARHR261460 Cardamine hirsuta HOM05D005844 ORTHO05D007203 1.3e-15 87.8 57 64.9
SHI16462 Sapria himalayana HOM05D005844 ORTHO05D007203 2.8e-10 70.1 67 50.7


User provided reference genes

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