Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07225 Davidia involucrata HOM05D000555 ORTHO05D001906 1.6e-197 692.6 344 100.0
Dinv27321 Davidia involucrata HOM05D000555 ORTHO05D001906 2.0e-128 463.0 330 75.2
Actinidia21320 Actinidia chinensis HOM05D000555 ORTHO05D001906 1.8e-92 343.6 330 56.1
CSS0047814 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D001906 1.3e-82 310.8 330 53.3
TAR381G0759 Trochodendron aralioides HOM05D000555 ORTHO05D001906 3.1e-81 306.2 337 50.1
GSVIVG01008876001 Vitis vinifera HOM05D000555 ORTHO05D001906 7.5e-67 258.5 336 47.6
Prupe.1G499400 Prunus persica HOM05D000555 ORTHO05D001906 7.8e-56 221.9 330 42.4
Rhsim06G0104100 Rhododendron simsii HOM05D000555 ORTHO05D001906 1.3e-55 221.1 337 42.4
CiPaw.05G222400 Carya illinoinensis HOM05D000555 ORTHO05D001906 1.1e-52 211.5 289 45.0
QL09p034959 Quercus lobata HOM05D000555 ORTHO05D001906 1.8e-52 210.7 331 42.3
Cfa016012 Carpinus fangiana HOM05D000555 ORTHO05D001906 9.2e-49 198.4 303 42.2
Thecc.08G124600 Theobroma cacao HOM05D000555 ORTHO05D001906 1.6e-48 197.6 337 41.2
Aqoxy6G00208 Aquilegia oxysepala HOM05D000555 ORTHO05D001906 2.7e-48 196.8 338 37.0
Nn5g28268 Nelumbo nucifera HOM05D000555 ORTHO05D001906 1.3e-47 194.5 332 38.0
Haze_00450 Corylus avellana HOM05D000555 ORTHO05D001906 2.3e-47 193.7 294 42.9
Nitab4.5_0004882g0040 Nicotiana tabacum HOM05D000555 ORTHO05D001906 3.0e-47 193.4 329 37.7
Solyc06g060380.3 Solanum lycopersicum HOM05D000555 ORTHO05D001906 5.1e-47 192.6 331 38.4
Sopen06g020520 Solanum pennellii HOM05D000555 ORTHO05D001906 1.5e-46 191.0 331 38.1
Duzib093G1130 Durio zibethinus HOM05D000555 ORTHO05D001906 1.9e-46 190.7 335 40.0
Atru.chr13.1457 Acer truncatum HOM05D000555 ORTHO05D001906 4.3e-46 189.5 336 39.6
Atru.chr13.1479 Acer truncatum HOM05D000555 ORTHO05D001906 4.3e-46 189.5 336 39.6
MD15G1350300 Malus domestica HOM05D000555 ORTHO05D001906 2.1e-45 187.2 335 37.9
Peaxi162Scf00051g00732 Petunia axillaris HOM05D000555 ORTHO05D001906 4.7e-45 186.0 333 38.7
MBI09_g12164_MAGBIO Magnolia biondii HOM05D000555 ORTHO05D001906 1.8e-44 184.1 336 37.8
Manes.18G076700 Manihot esculenta HOM05D000555 ORTHO05D001906 5.2e-44 182.6 332 40.4
PSO528G0268 Papaver somniferum HOM05D000555 ORTHO05D001906 2.1e-40 170.6 341 34.3
Nitab4.5_0000633g0190 Nicotiana tabacum HOM05D000555 ORTHO05D001906 3.0e-39 166.8 342 35.4
DCAR_003549 Daucus carota HOM05D000555 ORTHO05D001906 3.9e-39 166.4 288 38.2
PSO170G2163 Papaver somniferum HOM05D000555 ORTHO05D001906 3.9e-39 166.4 341 33.7
CANSAT11G2461 Cannabis sativa HOM05D000555 ORTHO05D001906 4.3e-38 162.9 338 37.9
MD08G1163400 Malus domestica HOM05D000555 ORTHO05D001906 3.6e-37 159.8 344 36.6
Gohir.D01G180700 Gossypium hirsutum HOM05D000555 ORTHO05D001906 1.8e-36 157.5 332 36.7
Gorai.002G221900 Gossypium raimondii HOM05D000555 ORTHO05D001906 1.8e-36 157.5 332 37.0
MD08G1163700 Malus domestica HOM05D000555 ORTHO05D001906 1.8e-36 157.5 317 38.5
Gohir.A01G188800 Gossypium hirsutum HOM05D000555 ORTHO05D001906 2.6e-35 153.7 344 34.9
Potri.002G084300 Populus trichocarpa HOM05D000555 ORTHO05D001906 6.4e-34 149.1 305 39.0
Cpa.g.sc36.62 Carica papaya HOM05D000555 ORTHO05D001906 1.4e-33 147.9 343 35.6
TWI56G0829 Tripterygium wilfordii HOM05D000555 ORTHO05D001906 5.4e-33 146.0 291 37.1
Glyma.13G080300 Glycine max HOM05D000555 ORTHO05D001906 3.9e-31 139.8 309 36.6
Duzib116G0370 Durio zibethinus HOM05D000555 ORTHO05D001906 8.7e-31 138.7 330 34.8
Eucgr.F03787 Eucalyptus grandis HOM05D000555 ORTHO05D001906 1.3e-29 134.8 320 32.5
Phvul.008G163350 Phaseolus vulgaris HOM05D000555 ORTHO05D001906 2.8e-29 133.7 354 34.2
Lalb_Chr10g0101751 Lupinus albus HOM05D000555 ORTHO05D001906 2.4e-28 130.6 297 34.3
Lj4A624T17 Lonicera japonica HOM05D000555 ORTHO05D029891 9.0e-28 128.6 163 47.9
RcHm_v2.0_Chr6g0295681 Rosa chinensis HOM05D000555 ORTHO05D001906 1.2e-27 128.3 148 47.3
VMungo0647G1307 Vigna mungo HOM05D000555 ORTHO05D001906 1.5e-27 127.9 303 36.0
FAN27G2775 Fragaria x ananassa HOM05D000555 ORTHO05D001906 2.0e-27 127.5 148 48.0
Lj1g0015636 Lotus japonicus HOM05D000555 ORTHO05D001906 2.0e-27 127.5 323 32.8
FvH4_2g26820 Fragaria vesca HOM05D000555 ORTHO05D001906 2.2e-26 124.0 148 48.0
FAN20G1220 Fragaria x ananassa HOM05D000555 ORTHO05D001906 2.2e-26 124.0 148 48.0
SGA_v2.0_scaffold52G18968 Striga asiatica HOM05D000555 ORTHO05D001906 6.4e-26 122.5 335 31.3
FAN24G2587 Fragaria x ananassa HOM05D000555 ORTHO05D001906 8.4e-26 122.1 148 47.3
Psat6g099000 Pisum sativum HOM05D000555 ORTHO05D001906 3.2e-25 120.2 308 35.7
FAN15G2287 Fragaria x ananassa HOM05D000555 ORTHO05D001906 1.6e-24 117.9 148 47.3
Migut.C01134 Erythranthe guttata HOM05D000555 ORTHO05D001906 2.1e-24 117.5 282 33.3
Medtr1g037280 Medicago truncatula HOM05D000555 ORTHO05D001906 3.5e-24 116.7 302 33.8
Sc02g0006040 Simmondsia chinensis HOM05D000555 ORTHO05D001906 3.5e-24 116.7 279 34.1
Ca_14563_v3 Cicer arietinum L. HOM05D000555 ORTHO05D001906 7.9e-24 115.5 300 34.3
Sp5g32750 Schrenkiella parvula HOM05D000555 ORTHO05D001906 1.0e-23 115.2 314 31.2
ATR0584G256 Amborella trichopoda HOM05D000555 ORTHO05D001906 3.0e-23 113.6 339 30.7
Hund17289 Selenicereus undatus HOM05D000555 ORTHO05D001906 5.1e-23 112.8 297 31.3
Carub.0002s2449 Capsella rubella HOM05D000555 ORTHO05D001906 1.9e-22 110.9 312 30.1
A02p21430 Brassica napus HOM05D000555 ORTHO05D001906 4.3e-22 109.8 310 32.6
BcaC03g15748 Brassica carinata HOM05D000555 ORTHO05D001906 1.3e-21 108.2 310 31.9
Thhalv10018009m.g Eutrema salsugineum HOM05D000555 ORTHO05D001906 1.3e-21 108.2 315 31.1
EL10Ac1g01004 Beta vulgaris HOM05D000555 ORTHO05D001906 2.1e-21 107.5 296 30.4
CARHR071110 Cardamine hirsuta HOM05D000555 ORTHO05D001906 2.1e-21 107.5 315 31.7
AT1G77600 Arabidopsis thaliana HOM05D000555 ORTHO05D001906 4.8e-21 106.3 311 28.9
TPR.G8250 Trifolium pratense HOM05D000555 ORTHO05D001906 6.2e-21 105.9 304 33.2
AL2G37810 Arabidopsis lyrata HOM05D000555 ORTHO05D001906 1.1e-20 105.1 312 29.8
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.1e-20 105.1 323 26.9
arahy.Tifrunner.gnm1.ann1.HRB127 Arachis hypogaea HOM05D000555 ORTHO05D001906 1.2e-19 101.7 86 55.8
Actinidia21314 Actinidia chinensis HOM05D000555 ORTHO05D001906 1.5e-19 101.3 172 40.1
BcaB05g25062 Brassica carinata HOM05D000555 ORTHO05D001906 2.0e-19 100.9 308 31.8
arahy.Tifrunner.gnm1.ann1.028SBR Arachis hypogaea HOM05D000555 ORTHO05D001906 4.5e-19 99.8 88 54.5
MELO3C010481.2 Cucumis melo HOM05D000555 ORTHO05D001906 2.9e-18 97.1 151 37.1
COL.COLO4_35931 Corchorus olitorius HOM05D000555 ORTHO05D001906 3.8e-18 96.7 333 29.4
Psat0s6006g0080 Pisum sativum HOM05D000555 ORTHO05D001906 3.8e-18 96.7 113 49.6
Sed0006597 Sechium edule HOM05D000555 ORTHO05D001906 1.1e-17 95.1 122 43.4
Aa31LG4G7710 Aethionema arabicum HOM05D000555 ORTHO05D001906 1.9e-17 94.4 332 27.4
HPP92_003205 Vanilla planifolia HOM05D000555 ORTHO05D001906 3.2e-17 93.6 344 28.8
HPP92_003202 Vanilla planifolia HOM05D000555 ORTHO05D001906 1.2e-16 91.7 348 29.0
CsaV3_4G028210 Cucumis sativus L. HOM05D000555 ORTHO05D001906 1.6e-16 91.3 149 34.2
HanXRQChr11g0326001 Helianthus annuus HOM05D000555 ORTHO05D001906 2.7e-16 90.5 109 44.0
Sabra02G0065900 Salix brachista HOM05D000555 ORTHO05D001906 3.5e-16 90.1 275 32.7
ECA232G2241 Erigeron canadensis HOM05D000555 ORTHO05D001906 4.6e-16 89.7 99 44.4
AUR62019084 Chenopodium quinoa HOM05D000555 ORTHO05D001906 3.9e-15 86.7 292 27.1
Ah.05g171140 Amaranthus hybridus HOM05D000555 ORTHO05D001906 6.7e-15 85.9 78 52.6
C02p34810 Brassica napus HOM05D000555 ORTHO05D001906 1.1e-14 85.1 307 30.0
BolC2t09500H Brassica oleracea HOM05D000555 ORTHO05D001906 1.5e-14 84.7 307 30.0
BraA02t07153Z Brassica rapa HOM05D000555 ORTHO05D001906 2.5e-14 84.0 307 30.3
CDE06G0752 Ceratophyllum demersum HOM05D000555 ORTHO05D001906 4.8e-13 79.7 325 28.6
PGR042G0600 Punica granatum HOM05D000555 ORTHO05D001906 1.4e-12 78.2 122 36.9
SHI55104 Sapria himalayana HOM05D000555 ORTHO05D001906 4.0e-12 76.6 147 38.8
Oeu044433.1 Olea europaea HOM05D000555 ORTHO05D001906 4.9e-10 69.7 390 23.1
Medtr2g027090 Medicago truncatula HOM05D000555 ORTHO05D001906 1.4e-09 68.2 372 23.1
TPR.G17534 Trifolium pratense HOM05D000555 ORTHO05D001906 5.5e-09 66.2 374 23.5
Lsat_1_v5_gn_4_134440 Lactuca sativa HOM05D000555 ORTHO05D001906 9.3e-09 65.5 57 56.1
CANSAT56G1713 Cannabis sativa HOM05D000555 ORTHO05D001906 2.7e-08 63.9 358 22.6
Phvul.006G138400 Phaseolus vulgaris HOM05D000555 ORTHO05D001906 3.5e-08 63.5 380 21.8
SGA_v2.0_scaffold7G03693 Striga asiatica HOM05D000555 ORTHO05D001906 7.9e-08 62.4 376 23.9
Medtr4g134080 Medicago truncatula HOM05D000555 ORTHO05D001906 1.3e-07 61.6 379 23.0
CiPaw.10G082000 Carya illinoinensis HOM05D000555 ORTHO05D001906 3.0e-07 60.5 388 24.2
Dinv04395 Davidia involucrata HOM05D000555 ORTHO05D001906 3.0e-07 60.5 400 23.0
Glyma.17G005500 Glycine max HOM05D000555 ORTHO05D001906 3.0e-07 60.5 378 21.4
Glyma.09G014600 Glycine max HOM05D000555 ORTHO05D001906 5.1e-07 59.7 374 21.7
arahy.Tifrunner.gnm1.ann1.BX9WGX Arachis hypogaea HOM05D000555 ORTHO05D001906 8.7e-07 58.9 374 20.6
Ca_00764_v3 Cicer arietinum L. HOM05D000555 ORTHO05D001906 8.7e-07 58.9 321 23.7
Ciclev10014035m.g Citrus clementina HOM05D000555 ORTHO05D001906 1.1e-06 58.5 397 23.4
Glyma.07G268200 Glycine max HOM05D000555 ORTHO05D001906 1.1e-06 58.5 381 23.1
Lj4A624T16 Lonicera japonica HOM05D000555 ORTHO05D001906 1.9e-06 57.8 48 58.3
Lalb_Chr18g0057351 Lupinus albus HOM05D000555 ORTHO05D001906 1.9e-06 57.8 376 21.0
BraA02t08154Z Brassica rapa HOM05D000555 ORTHO05D001906 5.7e-06 56.2 362 21.3
TPR.G5976 Trifolium pratense HOM05D000555 ORTHO05D001906 9.6e-06 55.5 372 21.5


User provided reference genes

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