Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 7.7e-58 226.9 110 100.0
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 7.8e-50 200.3 111 87.4
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 5.6e-48 194.1 111 84.7
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 2.6e-45 185.3 106 80.2
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 2.6e-45 185.3 106 80.2
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 1.4e-43 179.5 101 81.2
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.4e-43 178.7 112 76.8
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 2.4e-43 178.7 112 76.8
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 4.1e-43 177.9 101 77.2
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 4.6e-42 174.5 112 73.2
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 6.0e-42 174.1 116 73.3
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 6.0e-42 174.1 101 79.2
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 7.8e-42 173.7 104 76.9
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 7.8e-42 173.7 107 76.6
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 1.3e-41 172.9 112 68.8
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 1.7e-41 172.6 112 67.9
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 1.7e-41 172.6 103 77.7
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 3.9e-41 171.4 102 77.5
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 5.0e-41 171.0 112 71.4
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 5.0e-41 171.0 95 81.1
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 6.6e-41 170.6 100 75.0
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 8.6e-41 170.2 110 75.5
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 8.6e-41 170.2 104 75.0
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 8.6e-41 170.2 104 74.0
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 8.6e-41 170.2 109 74.3
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 1.1e-40 169.9 108 73.1
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 1.5e-40 169.5 110 71.8
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 1.9e-40 169.1 120 65.8
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 1.9e-40 169.1 103 76.7
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 2.5e-40 168.7 103 72.8
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.3e-40 168.3 104 73.1
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 4.3e-40 167.9 99 78.8
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 5.6e-40 167.5 101 75.2
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 7.3e-40 167.2 112 70.5
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 1.2e-39 166.4 109 69.7
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.2e-39 166.4 110 69.1
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 2.8e-39 165.2 96 77.1
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 2.8e-39 165.2 96 77.1
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 2.8e-39 165.2 96 77.1
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 3.6e-39 164.9 100 74.0
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 3.6e-39 164.9 101 72.3
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 3.6e-39 164.9 101 72.3
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.1e-38 163.3 110 67.3
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 1.1e-38 163.3 109 65.1
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 1.8e-38 162.5 112 67.9
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.8e-38 162.5 110 70.0
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 2.3e-38 162.2 113 69.9
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 5.2e-38 161.0 106 66.0
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 5.2e-38 161.0 115 67.8
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 8.9e-38 160.2 109 68.8
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 1.2e-37 159.8 103 69.9
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 1.5e-37 159.5 103 69.9
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 1.5e-37 159.5 110 68.2
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.5e-37 159.5 110 68.2
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.5e-37 159.5 103 71.8
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 2.6e-37 158.7 104 72.1
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 7.5e-37 157.1 96 74.0
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 7.5e-37 157.1 110 63.6
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 7.5e-37 157.1 112 69.6
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 1.3e-36 156.4 100 72.0
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.7e-36 156.0 102 70.6
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 1.7e-36 156.0 106 67.0
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 2.2e-36 155.6 108 65.7
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 2.9e-36 155.2 115 61.7
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 3.7e-36 154.8 108 64.8
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 3.7e-36 154.8 91 75.8
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 8.3e-36 153.7 106 67.0
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 8.3e-36 153.7 115 60.9
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 1.1e-35 153.3 101 69.3
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.1e-35 153.3 109 63.3
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.1e-35 153.3 102 65.7
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 1.4e-35 152.9 106 65.1
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 1.9e-35 152.5 101 68.3
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 1.9e-35 152.5 101 69.3
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 2.4e-35 152.1 103 70.9
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 4.1e-35 151.4 115 61.7
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 4.1e-35 151.4 102 68.6
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 5.4e-35 151.0 115 60.9
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 5.4e-35 151.0 115 60.9
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 7.0e-35 150.6 139 55.4
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 9.2e-35 150.2 97 71.1
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 1.6e-34 149.4 101 67.3
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 1.6e-34 149.4 109 64.2
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 6.0e-34 147.5 96 65.6
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 2.3e-33 145.6 98 64.3
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 3.0e-33 145.2 107 68.2
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 5.0e-33 144.4 97 63.9
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 6.6e-33 144.1 95 64.2
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 6.6e-33 144.1 87 82.8
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 3.3e-32 141.7 100 61.0
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 3.3e-32 141.7 97 62.9
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 7.3e-32 140.6 95 63.2
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 9.5e-32 140.2 95 63.2
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.2e-31 139.8 100 60.0
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 6.2e-31 137.5 95 62.1
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 6.2e-31 137.5 95 62.1
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 2.3e-30 135.6 95 62.1
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 4.0e-30 134.8 80 78.8
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 6.8e-30 134.0 86 76.7
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 1.2e-29 133.3 104 57.7
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 4.9e-28 127.9 82 72.0
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 1.1e-27 126.7 68 83.8
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 4.6e-26 121.3 68 77.9
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.5e-24 116.3 83 65.1
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 4.7e-23 111.3 65 76.9
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 6.2e-23 110.9 79 67.1
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.4e-22 109.8 73 72.6
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 8.9e-22 107.1 91 54.9
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 2.6e-21 105.5 105 48.6
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 9.9e-21 103.6 124 43.5
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 4.9e-20 101.3 85 57.6
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 8.4e-20 100.5 92 48.9
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.7e-17 92.8 104 52.9
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 8.7e-17 90.5 91 49.5
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 1.5e-16 89.7 68 57.4
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 3.6e-15 85.1 61 67.2
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 3.2e-11 72.0 61 55.7
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 4.2e-11 71.6 157 28.7


User provided reference genes

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