Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 3.9e-246 854.4 433 100.0
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 4.8e-212 741.1 448 84.8
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 1.0e-209 733.4 433 85.2
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 3.2e-208 728.4 433 84.8
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 4.2e-208 728.0 431 85.6
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 1.7e-204 716.1 433 83.1
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 2.2e-201 705.7 433 82.9
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 4.2e-200 701.4 380 92.1
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 4.2e-200 701.4 434 82.7
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 5.5e-200 701.0 434 82.3
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 2.1e-199 699.1 433 81.3
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 4.7e-199 698.0 430 82.6
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 1.0e-198 696.8 433 80.8
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 2.3e-198 695.7 433 81.1
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 3.0e-198 695.3 433 82.4
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 3.0e-198 695.3 433 82.4
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 3.9e-198 694.9 438 80.6
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 8.8e-198 693.7 433 82.4
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 2.0e-197 692.6 433 81.5
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 5.7e-197 691.0 432 80.6
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 1.7e-196 689.5 433 81.3
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 1.7e-196 689.5 433 81.8
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 1.7e-196 689.5 433 81.5
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 1.4e-195 686.4 436 82.3
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 1.8e-195 686.0 433 81.3
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 2.4e-195 685.6 434 80.0
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 2.4e-195 685.6 435 82.1
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.2e-194 683.3 429 81.8
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 1.6e-194 682.9 433 81.3
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 2.6e-194 682.2 433 80.4
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 2.6e-194 682.2 433 80.4
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 3.5e-194 681.8 455 79.6
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 1.0e-193 680.2 433 80.4
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 1.0e-193 680.2 433 80.1
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 1.0e-193 680.2 435 81.6
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.3e-193 679.9 434 79.3
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 1.3e-193 679.9 428 79.7
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 1.7e-193 679.5 433 81.1
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 1.7e-193 679.5 433 79.9
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 1.7e-193 679.5 435 81.4
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 3.8e-193 678.3 434 80.2
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 5.0e-193 677.9 435 80.0
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 1.1e-192 676.8 433 83.1
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 1.9e-192 676.0 435 80.5
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.9e-192 676.0 433 79.9
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 9.4e-192 673.7 433 80.1
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 2.1e-191 672.5 433 80.4
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 2.7e-191 672.2 442 79.2
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 4.7e-191 671.4 433 80.6
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 2.3e-190 669.1 372 90.1
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 3.0e-190 668.7 433 80.8
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 5.2e-190 667.9 434 80.4
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.0e-189 666.0 431 79.1
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 2.0e-189 666.0 431 79.8
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 2.0e-189 666.0 434 80.0
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 2.6e-189 665.6 433 79.7
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 3.3e-189 665.2 433 80.4
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 9.7e-189 663.7 432 79.2
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 3.7e-188 661.8 435 77.5
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 2.4e-187 659.1 412 83.3
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 2.4e-187 659.1 434 79.7
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 5.3e-187 657.9 440 77.7
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 9.1e-187 657.1 460 75.9
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 1.6e-186 656.4 428 78.7
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.1e-184 650.2 444 76.8
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 1.1e-184 650.2 441 77.6
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 1.5e-184 649.8 415 80.5
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 1.5e-184 649.8 445 76.0
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 1.9e-184 649.4 432 77.5
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 5.5e-184 647.9 454 76.7
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 5.5e-184 647.9 444 77.3
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 5.5e-184 647.9 414 82.1
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 7.2e-184 647.5 458 72.9
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 2.7e-183 645.6 429 78.6
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 6.1e-183 644.4 365 88.5
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 6.1e-183 644.4 436 77.3
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 1.4e-182 643.3 435 77.5
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 2.3e-182 642.5 434 77.6
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 3.0e-182 642.1 433 78.1
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 4.0e-182 641.7 435 78.6
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 6.8e-182 641.0 433 77.6
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 2.6e-181 639.0 433 78.1
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 7.5e-181 637.5 433 77.4
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 1.3e-177 626.7 431 74.0
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 5.0e-177 624.8 433 76.2
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.9e-176 622.9 439 76.3
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 1.9e-176 622.9 342 88.6
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 3.6e-175 618.6 402 80.3
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 3.6e-175 618.6 329 91.2
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 6.1e-175 617.8 435 75.4
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 8.0e-175 617.5 434 75.3
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 3.4e-173 612.1 439 76.5
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 4.4e-173 611.7 364 84.9
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 5.7e-173 611.3 437 76.4
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 5.7e-173 611.3 437 76.4
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 7.5e-173 610.9 439 76.1
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.7e-172 609.8 439 76.1
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 4.1e-171 605.1 434 74.2
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 7.0e-171 604.4 432 72.2
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 5.0e-169 598.2 423 72.6
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 6.6e-169 597.8 432 72.0
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 1.8e-166 589.7 414 72.7
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 3.4e-165 585.5 442 68.6
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 6.4e-164 581.3 363 78.5
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 8.3e-164 580.9 433 70.7
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 8.3e-164 580.9 361 78.1
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 2.0e-162 576.2 440 70.7
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 2.0e-162 576.2 440 70.7
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.7e-161 573.2 413 69.0
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 3.0e-161 572.4 382 79.3
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 3.9e-161 572.0 315 87.9
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.1e-158 563.9 379 72.8
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 1.4e-158 563.5 426 68.8
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 7.0e-155 551.2 367 77.1
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 3.5e-146 522.3 283 90.5
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 4.6e-146 521.9 371 76.0
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 2.3e-145 519.6 380 70.0
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 3.1e-142 509.2 430 62.8
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 3.1e-142 509.2 352 75.0
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 6.4e-140 501.5 432 61.6
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 1.1e-139 500.7 434 61.8
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 1.4e-139 500.4 446 59.6
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 2.4e-139 499.6 432 60.9
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 1.3e-137 493.8 432 60.9
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 8.7e-137 491.1 336 76.2
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 7.3e-136 488.0 431 60.6
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 7.3e-136 488.0 431 60.6
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 9.6e-136 487.6 431 60.1
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 4.8e-135 485.3 329 72.9
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 1.5e-133 480.3 433 59.1
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 2.0e-133 479.9 351 73.8
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 9.9e-133 477.6 433 58.7
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 2.1e-127 459.9 318 74.2
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 5.3e-126 455.3 395 63.3
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 3.0e-121 439.5 341 62.8
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 3.9e-121 439.1 350 59.7
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 5.8e-117 425.2 312 67.6
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 1.9e-115 420.2 323 69.7
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 8.7e-113 411.4 282 72.0
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 1.4e-107 394.0 224 87.9
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 1.8e-89 334.0 234 73.5
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 2.1e-74 283.9 193 75.1
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.7e-74 283.5 234 64.5
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 4.2e-67 259.6 201 63.7
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 5.7e-64 249.2 297 50.2
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 1.2e-61 241.5 276 48.9
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 5.7e-56 222.6 141 74.5
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 9.8e-56 221.9 208 57.7
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 1.3e-52 211.5 183 60.7
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 1.6e-50 204.5 316 38.9
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 1.6e-45 188.0 179 55.9
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 3.0e-44 183.7 173 56.6
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 5.0e-44 183.0 104 84.6
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 8.6e-44 182.2 148 66.2
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 3.3e-43 180.3 100 88.0
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 9.5e-43 178.7 101 82.2
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 1.1e-41 175.3 172 59.3
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 8.9e-41 172.2 101 79.2
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 2.4e-38 164.1 100 77.0
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 2.7e-37 160.6 179 52.0
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 1.3e-36 158.3 77 93.5
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 1.5e-35 154.8 122 67.2
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 2.1e-34 151.0 212 39.2
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 8.9e-33 145.6 135 60.7
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.4e-30 138.3 76 82.9
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 8.6e-28 129.0 72 88.9
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 4.4e-24 116.7 74 78.4
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 1.0e-20 105.5 123 48.8
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 2.4e-17 94.4 176 35.2
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 4.0e-17 93.6 77 66.2
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 4.0e-17 93.6 77 66.2
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 3.2e-14 84.0 49 83.7
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 3.9e-12 77.0 53 66.0
Sp6g37550 Schrenkiella parvula HOM05D003910 ORTHO05D004622 2.1e-10 71.2 91 46.2
Nn3g17591 Nelumbo nucifera HOM05D003910 ORTHO05D004622 9.0e-09 65.9 42 76.2
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 2.0e-08 64.7 59 57.6
ECA233G3734 Erigeron canadensis HOM05D005443 ORTHO05D009021 5.5e-06 56.6 105 41.9


User provided reference genes

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