Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07124 Davidia involucrata HOM05D006783 ORTHO05D008330 3.4e-217 758.1 390 100.0
Dinv24358 Davidia involucrata HOM05D006783 ORTHO05D008330 1.4e-157 560.1 394 77.4
Actinidia06622 Actinidia chinensis HOM05D006783 ORTHO05D008330 1.5e-127 460.3 432 56.9
Hma1.2p1_0050F.1_g029140 Hydrangea macrophylla HOM05D006783 ORTHO05D008330 8.1e-126 454.5 396 60.4
Rhsim10G0135000 Rhododendron simsii HOM05D006783 ORTHO05D008330 8.1e-126 454.5 417 58.8
TWI79G1521 Tripterygium wilfordii HOM05D006783 ORTHO05D008330 7.8e-121 438.0 390 59.0
QL10p043377 Quercus lobata HOM05D006783 ORTHO05D008330 4.3e-119 432.2 393 58.0
Haze_25231 Corylus avellana HOM05D006783 ORTHO05D008330 1.4e-117 427.2 385 59.2
CiPaw.03G122200 Carya illinoinensis HOM05D006783 ORTHO05D008330 2.0e-116 423.3 392 58.2
TAR381G1481 Trochodendron aralioides HOM05D006783 ORTHO05D008330 4.2e-114 415.6 401 56.4
vmacro12805 Vaccinium macrocarpon HOM05D006783 ORTHO05D008330 1.2e-113 414.1 419 53.9
Atru.chr4.894 Acer truncatum HOM05D006783 ORTHO05D008330 5.6e-111 405.2 457 49.7
Duzib264G0694 Durio zibethinus HOM05D006783 ORTHO05D008330 1.6e-110 403.7 437 51.0
Cpa.g.sc42.156 Carica papaya HOM05D006783 ORTHO05D008330 2.8e-110 402.9 392 52.8
FvH4_1g24320 Fragaria vesca HOM05D006783 ORTHO05D008330 2.8e-110 402.9 421 53.4
Potri.007G106700 Populus trichocarpa HOM05D006783 ORTHO05D008330 2.8e-110 402.9 399 54.9
FAN19G0409 Fragaria x ananassa HOM05D006783 ORTHO05D008330 3.6e-110 402.5 421 53.4
Thecc.01G131600 Theobroma cacao HOM05D006783 ORTHO05D008330 3.1e-109 399.4 435 49.7
Ciclev10000624m.g Citrus clementina HOM05D006783 ORTHO05D008330 9.0e-109 397.9 455 50.5
Cc07_g18470 Coffea canephora HOM05D006783 ORTHO05D008330 5.8e-108 395.2 397 52.6
FAN26G1994 Fragaria x ananassa HOM05D006783 ORTHO05D008330 2.2e-107 393.3 423 52.7
Manes.12G155400 Manihot esculenta HOM05D006783 ORTHO05D008330 4.9e-107 392.1 391 54.0
Oeu004243.1 Olea europaea HOM05D006783 ORTHO05D008330 6.4e-107 391.7 396 54.3
RcHm_v2.0_Chr2g0120831 Rosa chinensis HOM05D006783 ORTHO05D008330 1.9e-106 390.2 420 51.4
Sabra07G0087300 Salix brachista HOM05D006783 ORTHO05D008330 3.2e-106 389.4 399 54.4
Eucgr.H04963 Eucalyptus grandis HOM05D006783 ORTHO05D008330 3.0e-104 382.9 398 50.8
Lj4A842G81 Lonicera japonica HOM05D006783 ORTHO05D008330 1.1e-103 380.9 411 49.9
CANSAT01G2909 Cannabis sativa HOM05D006783 ORTHO05D008330 1.4e-101 374.0 415 52.5
GSVIVG01026486001 Vitis vinifera HOM05D006783 ORTHO05D008330 2.4e-101 373.2 386 52.6
COL.COLO4_35737 Corchorus olitorius HOM05D006783 ORTHO05D008330 1.5e-100 370.5 431 47.8
Gohir.A05G385200 Gossypium hirsutum HOM05D006783 ORTHO05D008330 3.8e-99 365.9 435 49.2
DCAR_020443 Daucus carota HOM05D006783 ORTHO05D008330 1.4e-98 364.0 428 47.4
BcaC07g41275 Brassica carinata HOM05D006783 ORTHO05D008330 3.5e-97 359.4 399 49.6
C08p42820 Brassica napus HOM05D006783 ORTHO05D008330 3.5e-97 359.4 399 49.6
MSTRG.2651 Avicennia marina HOM05D006783 ORTHO05D008330 6.0e-97 358.6 391 50.1
BolC8t51838H Brassica oleracea HOM05D006783 ORTHO05D008330 1.0e-96 357.8 399 49.9
Lj1g0010780 Lotus japonicus HOM05D006783 ORTHO05D008330 6.7e-96 355.1 414 49.8
Lsat_1_v5_gn_2_37361 Lactuca sativa HOM05D006783 ORTHO05D008330 8.7e-96 354.8 390 49.2
Thhalv10007278m.g Eutrema salsugineum HOM05D006783 ORTHO05D008330 1.9e-95 353.6 408 50.0
Peaxi162Scf00183g00220 Petunia axillaris HOM05D006783 ORTHO05D008330 5.7e-95 352.1 392 49.5
A09p59540 Brassica napus HOM05D006783 ORTHO05D008330 9.6e-95 351.3 399 49.4
BraA09t41331Z Brassica rapa HOM05D006783 ORTHO05D008330 9.6e-95 351.3 399 49.4
THA.LOC104808567 Tarenaya hassleriana HOM05D006783 ORTHO05D008330 9.6e-95 351.3 399 49.1
Migut.H00705 Erythranthe guttata HOM05D006783 ORTHO05D008330 1.3e-94 350.9 396 49.7
Sp1g16990 Schrenkiella parvula HOM05D006783 ORTHO05D008330 1.3e-94 350.9 402 49.5
Gorai.012G034600 Gossypium raimondii HOM05D006783 ORTHO05D008330 2.1e-94 350.1 289 59.9
PSO017G1517 Papaver somniferum HOM05D006783 ORTHO05D008330 2.1e-94 350.1 406 50.0
BcaB03g14467 Brassica carinata HOM05D006783 ORTHO05D008330 3.7e-94 349.4 394 50.0
PSO170G6811 Papaver somniferum HOM05D006783 ORTHO05D008330 6.3e-94 348.6 397 50.1
Sopen11g001950 Solanum pennellii HOM05D006783 ORTHO05D008330 8.2e-94 348.2 397 48.9
AL1G31600 Arabidopsis lyrata HOM05D006783 ORTHO05D008330 1.1e-93 347.8 404 50.2
Lalb_Chr11g0068431 Lupinus albus HOM05D006783 ORTHO05D008330 1.8e-93 347.1 387 48.8
EL10Ac6g15310 Beta vulgaris HOM05D006783 ORTHO05D008330 9.0e-93 344.7 397 48.1
Carub.0001s1866 Capsella rubella HOM05D006783 ORTHO05D008330 1.2e-92 344.4 404 49.3
Solyc11g006010.3 Solanum lycopersicum HOM05D006783 ORTHO05D008330 2.0e-92 343.6 397 47.9
AT1G19025 Arabidopsis thaliana HOM05D006783 ORTHO05D008330 1.3e-91 340.9 403 49.4
Nitab4.5_0000856g0080 Nicotiana tabacum HOM05D006783 ORTHO05D008330 1.7e-91 340.5 395 49.6
Aqoxy5G02235 Aquilegia oxysepala HOM05D006783 ORTHO05D008330 2.9e-91 339.7 417 47.7
Nitab4.5_0008132g0010 Nicotiana tabacum HOM05D006783 ORTHO05D008330 2.9e-91 339.7 395 49.6
Hund25583 Selenicereus undatus HOM05D006783 ORTHO05D008330 2.9e-91 339.7 406 47.8
Gohir.D04G022400 Gossypium hirsutum HOM05D006783 ORTHO05D008330 5.0e-91 339.0 289 57.4
HanXRQChr06g0180641 Helianthus annuus HOM05D006783 ORTHO05D008330 7.2e-90 335.1 388 48.5
ECA246G4425 Erigeron canadensis HOM05D006783 ORTHO05D008330 1.6e-89 334.0 390 46.4
Medtr3g096240 Medicago truncatula HOM05D006783 ORTHO05D008330 1.6e-89 334.0 387 46.0
TPR.G20746 Trifolium pratense HOM05D006783 ORTHO05D008330 3.5e-89 332.8 389 46.8
Glyma.06G153300 Glycine max HOM05D006783 ORTHO05D008330 4.6e-89 332.4 397 47.1
CARHR019650 Cardamine hirsuta HOM05D006783 ORTHO05D008330 1.3e-88 330.9 407 47.9
CAN.G582.7 Capsicum annuum HOM05D006783 ORTHO05D008330 2.8e-86 323.2 395 47.6
AUR62017874 Chenopodium quinoa HOM05D006783 ORTHO05D008330 4.8e-86 322.4 477 41.3
Ca_16945_v3 Cicer arietinum L. HOM05D006783 ORTHO05D008330 1.1e-85 321.2 273 58.6
AUR62003560 Chenopodium quinoa HOM05D006783 ORTHO05D008330 3.1e-85 319.7 473 40.8
Psat5g062360 Pisum sativum HOM05D006783 ORTHO05D008330 1.3e-83 314.3 395 44.8
Aa31LG7G3800 Aethionema arabicum HOM05D006783 ORTHO05D008330 2.9e-83 313.2 396 46.7
Ah.03g147820 Amaranthus hybridus HOM05D006783 ORTHO05D008330 2.9e-83 313.2 432 41.0
Nn5g28554 Nelumbo nucifera HOM05D006783 ORTHO05D008330 2.9e-83 313.2 322 54.0
arahy.Tifrunner.gnm1.ann1.GA3CQQ Arachis hypogaea HOM05D006783 ORTHO05D008330 3.8e-83 312.8 468 42.5
Ca_16964_v3 Cicer arietinum L. HOM05D006783 ORTHO05D008330 1.1e-82 311.2 269 57.2
arahy.Tifrunner.gnm1.ann1.NV8W9T Arachis hypogaea HOM05D006783 ORTHO05D008330 2.7e-81 306.6 468 42.1
ClCG02G000310 Citrullus lanatus HOM05D006783 ORTHO05D008330 3.7e-78 296.2 471 39.7
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 4.8e-78 295.8 318 52.8
Sed0010062 Sechium edule HOM05D006783 ORTHO05D008330 4.1e-77 292.7 471 40.6
CDE06G2516 Ceratophyllum demersum HOM05D006783 ORTHO05D008330 8.5e-75 285.0 388 44.6
BcaB03g12941 Brassica carinata HOM05D006783 ORTHO05D008330 7.2e-74 282.0 359 47.1
CsaV3_2G019520 Cucumis sativus L. HOM05D006783 ORTHO05D008330 9.4e-74 281.6 461 37.7
ATR1136G115 Amborella trichopoda HOM05D006783 ORTHO05D008330 1.4e-69 267.7 473 37.2
SHI11470 Sapria himalayana HOM05D006783 ORTHO05D008330 5.3e-69 265.8 389 41.9
MELO3C023221.2 Cucumis melo HOM05D006783 ORTHO05D008330 1.6e-68 264.2 469 37.5
Os08g0107600 Oryza sativa ssp. japonica HOM05D006783 ORTHO05D008330 3.3e-63 246.5 305 46.6
Zm00001eb145740 Zea mays HOM05D006783 ORTHO05D008330 1.8e-61 240.7 458 37.3
Os01g0881400 Oryza sativa ssp. japonica HOM05D006783 ORTHO05D008330 4.1e-61 239.6 281 47.3
MBI06_g29674_MAGBIO Magnolia biondii HOM05D006783 ORTHO05D008330 3.2e-58 229.9 188 59.0
SEGI_38469 Sequoiadendron giganteum HOM05D006783 ORTHO05D008330 1.8e-56 224.2 472 33.3
Zm00001eb174320 Zea mays HOM05D006783 ORTHO05D008330 1.8e-56 224.2 503 34.2
unitig_0.g1207 Utricularia gibba HOM05D006783 ORTHO05D008330 6.5e-51 205.7 428 36.7
TAR381G0047 Trochodendron aralioides HOM05D006783 ORTHO05D008330 4.0e-48 196.4 129 71.3
Psat7g194880 Pisum sativum HOM05D006783 ORTHO05D008330 1.9e-42 177.6 228 43.0
Zm00001eb290170 Zea mays HOM05D006783 ORTHO05D008330 4.0e-40 169.9 195 47.2
Psat0s4692g0040 Pisum sativum HOM05D006783 ORTHO05D008330 1.3e-38 164.9 113 66.4
Psat3g153680 Pisum sativum HOM05D006783 ORTHO05D008330 4.1e-37 159.8 113 63.7
TAR371G1287 Trochodendron aralioides HOM05D006783 ORTHO05D008330 3.3e-34 150.2 92 75.0
Pp3c17_21070 Physcomitrium patens HOM05D006783 ORTHO05D008330 8.0e-33 145.6 276 33.0
TAR381G1530 Trochodendron aralioides HOM05D006783 ORTHO05D008330 8.6e-27 125.6 155 47.1
HPP92_013423 Vanilla planifolia HOM05D006783 ORTHO05D008330 1.7e-22 111.3 190 37.4
Zm00001eb092970 Zea mays HOM05D006783 ORTHO05D008330 3.2e-21 107.1 372 29.0
CBR_g9109 Chara braunii HOM05D006783 ORTHO05D008330 3.1e-16 90.5 249 27.7
Zm00001eb286580 Zea mays HOM05D006783 ORTHO05D008330 9.2e-13 79.0 82 54.9


User provided reference genes

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