Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 9.0e-125 450.3 231 100.0
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 3.8e-99 365.2 231 84.8
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 1.6e-92 343.2 231 79.2
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 5.2e-88 328.2 242 74.8
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 1.7e-86 323.2 231 74.0
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 8.3e-86 320.9 234 73.9
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 2.3e-83 312.8 240 72.5
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 2.3e-80 302.8 232 72.4
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 1.3e-78 297.0 238 70.2
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 3.8e-75 285.4 243 66.3
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 1.1e-74 283.9 259 63.3
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 1.5e-74 283.5 236 67.8
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 1.5e-74 283.5 233 70.8
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 3.3e-74 282.3 237 67.5
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 4.3e-74 282.0 242 66.1
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 4.3e-74 282.0 257 64.6
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 7.3e-74 281.2 248 65.7
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 6.1e-73 278.1 239 66.5
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 8.0e-73 277.7 241 65.1
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 1.8e-72 276.6 231 66.2
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 3.0e-72 275.8 236 67.8
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 4.0e-72 275.4 243 67.1
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 5.8e-71 271.6 239 65.3
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 1.7e-70 270.0 241 63.9
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 2.9e-70 269.2 237 66.2
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 2.4e-69 266.2 243 64.6
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 2.4e-69 266.2 240 64.2
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.2e-69 265.8 240 63.8
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 4.1e-69 265.4 237 63.7
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 5.4e-69 265.0 243 64.6
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 5.4e-69 265.0 236 65.7
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 7.0e-69 264.6 250 61.6
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 9.2e-69 264.2 249 59.8
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 1.2e-68 263.8 243 63.0
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 1.6e-68 263.5 249 61.8
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 2.0e-68 263.1 232 64.2
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 2.0e-68 263.1 241 63.1
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 4.6e-68 261.9 246 63.4
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 7.8e-68 261.2 237 60.8
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.8e-68 261.2 240 60.4
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 7.8e-68 261.2 239 62.3
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 1.0e-67 260.8 234 63.2
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 1.3e-67 260.4 236 64.0
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 2.3e-67 259.6 240 60.0
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 3.9e-67 258.8 156 82.7
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 3.9e-67 258.8 236 63.1
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 1.5e-66 256.9 249 60.6
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 5.6e-66 255.0 245 60.0
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 5.6e-66 255.0 236 61.4
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 2.1e-65 253.1 156 82.1
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 8.0e-65 251.1 254 59.1
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 2.3e-64 249.6 210 66.7
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 8.9e-64 247.7 229 59.4
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 1.3e-62 243.8 214 61.7
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 2.2e-62 243.0 231 61.0
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 3.7e-62 242.3 292 50.0
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 6.4e-62 241.5 238 60.9
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 4.3e-58 228.8 228 61.0
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 1.8e-56 223.4 160 70.0
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 8.3e-54 214.5 209 56.0
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 3.2e-53 212.6 240 55.4
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 2.5e-50 203.0 161 63.4
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 1.1e-48 197.6 171 60.2
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 1.9e-42 176.8 164 55.5
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 8.1e-41 171.4 97 84.5
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 2.7e-36 156.4 232 44.8
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 4.5e-31 139.0 96 74.0
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.1e-26 124.4 135 51.1
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 9.6e-26 121.3 169 45.0
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 3.2e-21 106.3 141 38.3
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 2.8e-17 93.2 132 46.2
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 1.3e-14 84.3 49 81.6
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.3e-14 84.3 56 75.0
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 1.7e-14 84.0 49 79.6
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.7e-14 84.0 47 85.1
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.8e-14 82.8 80 61.2
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 5.5e-13 79.0 58 69.0
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.6e-12 77.4 47 78.7
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.9e-11 72.8 47 76.6
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 1.7e-06 57.4 119 32.8
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 2.9e-06 56.6 95 31.6
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 5.0e-06 55.8 118 31.4
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 8.5e-06 55.1 29 89.7


User provided reference genes

Program Settings