Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 4.0e-164 581.6 360 100.0
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 3.5e-99 365.9 362 59.7
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 5.6e-81 305.4 360 54.4
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 5.6e-81 305.4 360 54.4
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 2.1e-67 260.4 360 51.1
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 1.9e-60 237.3 344 47.7
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 1.0e-53 214.9 381 45.4
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 3.8e-45 186.4 275 45.8
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 6.5e-45 185.7 367 37.9
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 3.5e-43 179.9 360 39.4
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 1.0e-42 178.3 372 39.2
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 6.3e-40 169.1 374 45.7
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 7.7e-38 162.2 348 40.8
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 2.2e-37 160.6 367 46.0
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 1.5e-33 147.9 371 43.9
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 2.2e-32 144.1 348 35.1
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 6.3e-32 142.5 365 43.0
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 6.3e-32 142.5 348 42.2
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 5.3e-31 139.4 351 35.3
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 1.0e-29 135.2 361 33.5
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 2.9e-29 133.7 276 45.3
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 6.5e-29 132.5 358 33.8
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 1.1e-28 131.7 276 46.0
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 1.4e-28 131.3 376 33.5
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 1.9e-28 131.0 348 39.1
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 3.2e-28 130.2 322 41.0
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 5.5e-28 129.4 369 33.6
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 7.2e-28 129.0 359 33.7
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 1.6e-27 127.9 371 41.8
Lsat_1_v5_gn_6_18081 Lactuca sativa HOM05D009485 ORTHO05D006259 4.7e-27 126.3 356 40.2
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 7.9e-27 125.6 170 47.1
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.0e-26 125.2 333 40.5
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 8.8e-26 122.1 369 32.2
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.5e-25 121.3 333 39.0
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 2.6e-25 120.6 368 38.6
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 3.3e-25 120.2 327 33.0
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 7.4e-25 119.0 335 38.8
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 3.7e-24 116.7 359 31.8
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 3.1e-23 113.6 147 51.7
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 5.3e-23 112.8 333 32.1
Hma1.2p1_1729F.1_g299610 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 9.1e-23 112.1 381 34.1
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 9.1e-23 112.1 322 42.5
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 1.2e-22 111.7 360 40.6
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 1.2e-22 111.7 371 34.5
Nitab4.5_0001402g0020 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.6e-22 111.3 266 35.3
Nitab4.5_0002027g0170 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.6e-22 111.3 359 31.5
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 4.5e-22 109.8 172 41.9
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 2.2e-21 107.5 340 35.3
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 5.0e-21 106.3 162 48.1
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 8.5e-21 105.5 353 29.2
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 1.1e-20 105.1 367 37.3
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 1.1e-20 105.1 143 49.7
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 2.7e-19 100.5 370 36.2
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.7e-19 100.5 360 34.2
Prupe.3G172600 Prunus persica HOM05D006785 ORTHO05D006259 6.1e-19 99.4 356 37.9
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 8.0e-19 99.0 168 41.7
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 8.0e-19 99.0 340 33.8
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 8.0e-19 99.0 355 31.0
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 1.0e-18 98.6 269 43.1
PGSC0003DMG400021282 Solanum tuberosum HOM05D009485 ORTHO05D006259 1.8e-18 97.8 245 35.1
arahy.Tifrunner.gnm1.ann1.PX2Y9B Arachis hypogaea HOM05D006785 ORTHO05D006259 3.0e-18 97.1 333 36.9
RcHm_v2.0_Chr2g0151481 Rosa chinensis HOM05D006785 ORTHO05D006259 3.0e-18 97.1 335 37.3
Glyma.02G287000 Glycine max HOM05D006785 ORTHO05D006259 4.4e-17 93.2 322 37.6
Cc05_g09420 Coffea canephora HOM05D009485 ORTHO05D006259 5.7e-17 92.8 172 37.2
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 5.7e-17 92.8 147 48.3
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 9.7e-17 92.0 149 42.3
CAN.G1191.3 Capsicum annuum HOM05D009485 ORTHO05D006259 1.7e-16 91.3 172 39.5
Aqoxy4G00148 Aquilegia oxysepala HOM05D006785 ORTHO05D006259 6.3e-16 89.4 310 32.3
TAR622G1344 Trochodendron aralioides HOM05D006785 ORTHO05D006259 6.3e-16 89.4 150 43.3
Lalb_Chr10g0106721 Lupinus albus HOM05D006785 ORTHO05D006259 8.2e-16 89.0 322 37.6
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 1.4e-15 88.2 149 37.6
unitig_747.g21610 Utricularia gibba HOM05D009485 ORTHO05D006259 1.8e-15 87.8 365 26.3
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 7.0e-15 85.9 128 44.5
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 7.0e-15 85.9 128 44.5
Solyc10g007780.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 9.1e-15 85.5 193 36.3
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 1.2e-14 85.1 128 44.5
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 1.2e-14 85.1 182 37.9
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 1.2e-14 85.1 140 42.9
Solyc07g056370.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 4.5e-14 83.2 139 41.7
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea HOM05D006785 ORTHO05D006259 5.9e-14 82.8 323 36.8
Sopen07g029750 Solanum pennellii HOM05D009485 ORTHO05D006259 7.7e-14 82.4 160 38.8
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 1.0e-13 82.0 365 32.6
MBI07_g07832_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 1.3e-13 81.6 368 27.2
Nitab4.5_0001675g0090 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.3e-13 81.6 165 37.6
Medtr5g091710 Medicago truncatula HOM05D006785 ORTHO05D006259 2.9e-13 80.5 266 41.7
TPR.G12660 Trifolium pratense HOM05D006785 ORTHO05D006259 2.9e-13 80.5 319 37.0
Oeu020927.1 Olea europaea HOM05D009485 ORTHO05D006259 3.8e-13 80.1 172 33.1
arahy.Tifrunner.gnm1.ann1.SE4LXZ Arachis hypogaea HOM05D006785 ORTHO05D006259 8.5e-13 79.0 267 37.5
Glyma.14G027900 Glycine max HOM05D006785 ORTHO05D006259 1.1e-12 78.6 322 37.3
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 1.9e-12 77.8 332 35.8
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 1.9e-12 77.8 322 35.7
Ciclev10032336m.g Citrus clementina HOM05D006785 ORTHO05D006259 2.5e-12 77.4 343 36.4
Potri.002G060200 Populus trichocarpa HOM05D006785 ORTHO05D006259 4.2e-12 76.6 152 42.8
unitig_46.g18281 Utricularia gibba HOM05D009485 ORTHO05D006259 9.4e-12 75.5 209 29.2
Gohir.D11G228900 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.2e-11 75.1 117 42.7
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 2.1e-11 74.3 324 28.4
Aa31LG1G7630 Aethionema arabicum HOM05D006785 ORTHO05D006259 2.3e-10 70.9 151 35.1
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 4.0e-10 70.1 321 27.7
Ca_06284_v3 Cicer arietinum L. HOM05D006785 ORTHO05D006259 5.2e-10 69.7 325 36.6
PSO104G0025 Papaver somniferum HOM05D006785 ORTHO05D006259 1.5e-09 68.2 124 40.3
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 2.0e-09 67.8 377 26.5
LjContig00310g0014416 Lotus japonicus HOM05D006785 ORTHO05D006259 2.6e-09 67.4 324 33.0
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 3.4e-09 67.0 257 31.1
Psat2g015800 Pisum sativum HOM05D006785 ORTHO05D006259 3.4e-09 67.0 324 37.0
ATR0568G074 Amborella trichopoda HOM05D006785 ORTHO05D006259 7.5e-09 65.9 382 27.0
BcaB02g06783 Brassica carinata HOM05D006785 ORTHO05D006259 7.5e-09 65.9 138 37.0
CDE07G0721 Ceratophyllum demersum HOM05D050733 ORTHO05D006259 9.8e-09 65.5 83 47.0
Duzib147G0591 Durio zibethinus HOM05D006785 ORTHO05D006259 6.3e-08 62.8 145 35.9
Duzib187G1417 Durio zibethinus HOM05D006785 ORTHO05D006259 8.3e-08 62.4 135 38.5
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 1.1e-07 62.0 263 28.9
BraA10t42785Z Brassica rapa HOM05D006785 ORTHO05D006259 2.4e-07 60.8 111 38.7
Nitab4.5_0003934g0050 Nicotiana tabacum HOM05D009485 ORTHO05D006259 2.4e-07 60.8 86 43.0
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 4.1e-07 60.1 192 40.1
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 7.0e-07 59.3 265 27.5
BcaB02g07495 Brassica carinata HOM05D006785 ORTHO05D006259 3.5e-06 57.0 332 29.5
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 3.5e-06 57.0 263 28.1
Potri.005G201400 Populus trichocarpa HOM05D006785 ORTHO05D006259 3.5e-06 57.0 369 26.3
Lalb_Chr05g0211951 Lupinus albus HOM05D006785 ORTHO05D006259 7.7e-06 55.8 160 33.8


User provided reference genes

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