Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv07042 Davidia involucrata HOM05D005492 ORTHO05D185078 1.6e-80 302.8 156 100.0
Dinv22020 Davidia involucrata HOM05D005492 ORTHO05D006911 4.3e-38 161.8 177 54.2
Peaxi162Scf00626g00718 Petunia axillaris HOM05D005492 ORTHO05D006911 2.2e-37 159.5 174 55.2
Dinv44895 Davidia involucrata HOM05D005492 ORTHO05D006911 1.4e-36 156.8 177 53.1
Nitab4.5_0000377g0170 Nicotiana tabacum HOM05D005492 ORTHO05D006911 1.4e-36 156.8 177 52.5
Nitab4.5_0005557g0040 Nicotiana tabacum HOM05D005492 ORTHO05D006911 1.4e-36 156.8 177 52.5
CAN.G723.31 Capsicum annuum HOM05D005492 ORTHO05D006911 5.3e-36 154.8 177 52.0
Gohir.A05G264075 Gossypium hirsutum HOM05D005492 ORTHO05D006911 5.3e-36 154.8 177 51.4
Gohir.D05G266500 Gossypium hirsutum HOM05D005492 ORTHO05D006911 5.3e-36 154.8 177 51.4
Gorai.009G278400 Gossypium raimondii HOM05D005492 ORTHO05D006911 5.3e-36 154.8 177 51.4
CSS0048416 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 6.9e-36 154.5 177 53.1
Gohir.D06G028400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 9.0e-36 154.1 177 51.4
Gorai.010G031300 Gossypium raimondii HOM05D005492 ORTHO05D006911 9.0e-36 154.1 177 51.4
Thecc.08G078100 Theobroma cacao HOM05D005492 ORTHO05D006911 9.0e-36 154.1 177 51.4
Atru.BG.248.p Acer truncatum HOM05D005492 ORTHO05D006911 1.5e-35 153.3 173 53.2
COL.COLO4_35339 Corchorus olitorius HOM05D005492 ORTHO05D006911 1.5e-35 153.3 177 51.4
vmacro04619 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 1.5e-35 153.3 180 51.7
Actinidia19266 Actinidia chinensis HOM05D005492 ORTHO05D006911 2.0e-35 152.9 177 50.8
Duzib041G0144 Durio zibethinus HOM05D005492 ORTHO05D006911 2.0e-35 152.9 181 50.8
Gohir.A06G029400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 2.0e-35 152.9 177 50.8
MD08G1209200 Malus domestica HOM05D005492 ORTHO05D006911 2.0e-35 152.9 177 50.3
Prupe.1G541400 Prunus persica HOM05D005492 ORTHO05D006911 2.0e-35 152.9 177 50.8
Rhsim07G0214900 Rhododendron simsii HOM05D005492 ORTHO05D006911 2.0e-35 152.9 177 53.1
Solyc04g076890.4 Solanum lycopersicum HOM05D005492 ORTHO05D006911 2.0e-35 152.9 177 51.4
Sopen04g030660 Solanum pennellii HOM05D005492 ORTHO05D006911 2.0e-35 152.9 177 51.4
PGSC0003DMG400006380 Solanum tuberosum HOM05D005492 ORTHO05D006911 2.0e-35 152.9 177 51.4
TAR628G0115 Trochodendron aralioides HOM05D005492 ORTHO05D006911 2.6e-35 152.5 177 51.4
Potri.002G107600 Populus trichocarpa HOM05D005492 ORTHO05D006911 3.4e-35 152.1 177 50.3
RcHm_v2.0_Chr7g0232851 Rosa chinensis HOM05D005492 ORTHO05D006911 3.4e-35 152.1 177 50.3
Sabra02G0084500 Salix brachista HOM05D005492 ORTHO05D006911 3.4e-35 152.1 177 50.3
TWI12G1341 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 3.4e-35 152.1 177 50.3
TWI32G1091 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 3.4e-35 152.1 181 50.8
arahy.Tifrunner.gnm1.ann1.7IN1UY Arachis hypogaea HOM05D005492 ORTHO05D006911 4.5e-35 151.8 177 50.8
arahy.Tifrunner.gnm1.ann1.EMS59G Arachis hypogaea HOM05D005492 ORTHO05D006911 4.5e-35 151.8 177 50.8
Cfa020694 Carpinus fangiana HOM05D005492 ORTHO05D006911 4.5e-35 151.8 177 51.4
CiPaw.15G151700 Carya illinoinensis HOM05D005492 ORTHO05D006911 4.5e-35 151.8 177 50.3
Ca_15548_v3 Cicer arietinum L. HOM05D005492 ORTHO05D006911 4.5e-35 151.8 177 50.8
Ciclev10002666m.g Citrus clementina HOM05D005492 ORTHO05D006911 4.5e-35 151.8 177 50.8
Haze_18999 Corylus avellana HOM05D005492 ORTHO05D006911 4.5e-35 151.8 177 51.4
Eucgr.F00462 Eucalyptus grandis HOM05D005492 ORTHO05D006911 4.5e-35 151.8 177 50.8
Glyma.06G091400 Glycine max HOM05D005492 ORTHO05D006911 4.5e-35 151.8 174 51.1
Hma1.2p1_1548F.1_g290020 Hydrangea macrophylla HOM05D005492 ORTHO05D006911 4.5e-35 151.8 179 50.8
vmacro21373 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 4.5e-35 151.8 181 50.8
Actinidia10257 Actinidia chinensis HOM05D005492 ORTHO05D006911 5.9e-35 151.4 177 52.5
HanXRQChr01g0001771 Helianthus annuus HOM05D005492 ORTHO05D006911 5.9e-35 151.4 177 50.8
Medtr3g111110 Medicago truncatula HOM05D005492 ORTHO05D006911 5.9e-35 151.4 177 50.8
TPR.G12370 Trifolium pratense HOM05D005492 ORTHO05D006911 5.9e-35 151.4 177 51.4
VMungo1309G2191 Vigna mungo HOM05D005492 ORTHO05D006911 5.9e-35 151.4 177 50.8
CsaV3_3G048290 Cucumis sativus L. HOM05D005492 ORTHO05D006911 7.7e-35 151.0 177 50.3
Duzib041G0066 Durio zibethinus HOM05D005492 ORTHO05D006911 7.7e-35 151.0 181 50.3
Lj1g0026792 Lotus japonicus HOM05D005492 ORTHO05D006911 7.7e-35 151.0 177 50.8
Psat5g017920 Pisum sativum HOM05D005492 ORTHO05D006911 7.7e-35 151.0 177 50.3
Carub.0001s2610 Capsella rubella HOM05D005492 ORTHO05D006911 1.0e-34 150.6 177 49.7
Lalb_Chr08g0242711 Lupinus albus HOM05D005492 ORTHO05D006911 1.0e-34 150.6 177 50.8
Oeu002945.1 Olea europaea HOM05D005492 ORTHO05D006911 1.0e-34 150.6 177 50.3
MSTRG.24417 Avicennia marina HOM05D005492 ORTHO05D006911 1.3e-34 150.2 176 50.6
CARHR027130 Cardamine hirsuta HOM05D005492 ORTHO05D006911 1.3e-34 150.2 177 49.7
FAN04G2818 Fragaria x ananassa HOM05D005492 ORTHO05D006911 1.3e-34 150.2 177 49.7
MD15G1393200 Malus domestica HOM05D005492 ORTHO05D006911 1.3e-34 150.2 177 49.2
AL1G40960 Arabidopsis lyrata HOM05D005492 ORTHO05D006911 1.7e-34 149.8 177 49.7
AT1G27530 Arabidopsis thaliana HOM05D005492 ORTHO05D006911 1.7e-34 149.8 177 49.7
CDE04G0412 Ceratophyllum demersum HOM05D005492 ORTHO05D006911 1.7e-34 149.8 177 50.8
GSVIVG01009242001 Vitis vinifera HOM05D005492 ORTHO05D006911 1.7e-34 149.8 181 50.3
PSO210G2227 Papaver somniferum HOM05D005492 ORTHO05D006911 2.2e-34 149.4 177 49.7
PSO761G0095 Papaver somniferum HOM05D005492 ORTHO05D006911 2.2e-34 149.4 177 49.7
CANSAT35G2015 Cannabis sativa HOM05D005492 ORTHO05D006911 2.9e-34 149.1 177 49.2
Glyma.04G089600 Glycine max HOM05D005492 ORTHO05D006911 2.9e-34 149.1 174 50.6
Lsat_1_v5_gn_9_81101 Lactuca sativa HOM05D005492 ORTHO05D006911 2.9e-34 149.1 176 49.4
FAN08G0693 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.8e-34 148.7 177 49.2
FAN18G0360 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.8e-34 148.7 177 49.2
Manes.18G054601 Manihot esculenta HOM05D005492 ORTHO05D006911 3.8e-34 148.7 177 50.8
PGR083G0175 Punica granatum HOM05D005492 ORTHO05D006911 3.8e-34 148.7 177 49.7
TAR381G0934 Trochodendron aralioides HOM05D005492 ORTHO05D006911 3.8e-34 148.7 175 52.6
BcaB03g13980 Brassica carinata HOM05D005492 ORTHO05D006911 5.0e-34 148.3 177 49.2
Cpa.g.sc160.3 Carica papaya HOM05D005492 ORTHO05D006911 5.0e-34 148.3 181 49.2
Oeu026363.1 Olea europaea HOM05D005492 ORTHO05D006911 5.0e-34 148.3 177 49.7
QL12p040192 Quercus lobata HOM05D005492 ORTHO05D006911 5.0e-34 148.3 176 49.4
Sp1g23790 Schrenkiella parvula HOM05D005492 ORTHO05D006911 5.0e-34 148.3 177 49.2
C03p74220 Brassica napus HOM05D005492 ORTHO05D006911 6.5e-34 147.9 177 49.2
Sed0023469 Sechium edule HOM05D005492 ORTHO05D006911 6.5e-34 147.9 177 48.6
Sc02g0008380 Simmondsia chinensis HOM05D005492 ORTHO05D006911 8.5e-34 147.5 184 49.5
Aqoxy5G01947 Aquilegia oxysepala HOM05D005492 ORTHO05D006911 1.1e-33 147.1 177 50.3
MBI16_g26726_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 1.1e-33 147.1 177 49.7
BolC3t19680H Brassica oleracea HOM05D005492 ORTHO05D006911 1.4e-33 146.7 177 48.6
BcaC01g06944 Brassica carinata HOM05D005492 ORTHO05D006911 1.9e-33 146.4 177 48.6
A07p11710 Brassica napus HOM05D005492 ORTHO05D006911 1.9e-33 146.4 177 48.6
A08p26210 Brassica napus HOM05D005492 ORTHO05D006911 1.9e-33 146.4 177 48.6
C07p17680 Brassica napus HOM05D005492 ORTHO05D006911 1.9e-33 146.4 177 48.6
BolC7t42275H Brassica oleracea HOM05D005492 ORTHO05D006911 1.9e-33 146.4 177 48.6
BraA07t28956Z Brassica rapa HOM05D005492 ORTHO05D006911 1.9e-33 146.4 177 48.6
BraA08t34572Z Brassica rapa HOM05D005492 ORTHO05D006911 1.9e-33 146.4 177 48.6
Thhalv10008910m.g Eutrema salsugineum HOM05D005492 ORTHO05D006911 1.9e-33 146.4 177 48.6
Ah.00g000130 Amaranthus hybridus HOM05D005492 ORTHO05D006911 2.5e-33 146.0 177 49.7
Lj4A81T75 Lonicera japonica HOM05D005492 ORTHO05D006911 2.5e-33 146.0 175 49.7
BcaC06g35300 Brassica carinata HOM05D005492 ORTHO05D006911 3.2e-33 145.6 177 49.2
SGA_v2.0_scaffold28G11869 Striga asiatica HOM05D005492 ORTHO05D006911 3.2e-33 145.6 176 48.9
ECA232G4293 Erigeron canadensis HOM05D005492 ORTHO05D006911 4.2e-33 145.2 177 49.2
BcaC01g01601 Brassica carinata HOM05D005492 ORTHO05D006911 5.5e-33 144.8 177 48.0
Migut.N02829 Erythranthe guttata HOM05D005492 ORTHO05D006911 7.2e-33 144.4 176 48.9
Migut.O00437 Erythranthe guttata HOM05D005492 ORTHO05D006911 7.2e-33 144.4 176 48.9
BcaC05g26754 Brassica carinata HOM05D005492 ORTHO05D006911 9.4e-33 144.1 177 48.0
THA.LOC104800327 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 9.4e-33 144.1 177 48.0
unitig_8.g4867 Utricularia gibba HOM05D002193 ORTHO05D002631 9.4e-33 144.1 173 48.6
Cc10_g08150 Coffea canephora HOM05D005492 ORTHO05D006911 1.6e-32 143.3 175 49.1
Duzib116G0911 Durio zibethinus HOM05D005492 ORTHO05D006911 1.6e-32 143.3 179 48.6
MSTRG.22188 Avicennia marina HOM05D005492 ORTHO05D006911 3.6e-32 142.1 173 49.1
AUR62035408 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.0e-31 140.6 174 48.9
AUR62035696 Chenopodium quinoa HOM05D005492 ORTHO05D006911 1.0e-31 140.6 174 48.9
HPP92_010753 Vanilla planifolia HOM05D005492 ORTHO05D006911 1.5e-30 136.7 177 47.5
Aa31LG7G10120 Aethionema arabicum HOM05D005492 ORTHO05D006911 7.4e-30 134.4 176 46.6
Zm00001eb010950 Zea mays HOM05D005492 ORTHO05D006911 3.7e-29 132.1 176 44.3
SEGI_29138 Sequoiadendron giganteum HOM05D005492 ORTHO05D006911 1.1e-28 130.6 181 44.8
Os10g0205200 Oryza sativa ssp. japonica HOM05D005492 ORTHO05D006911 4.1e-28 128.6 176 44.3
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 1.2e-27 127.1 158 50.6
Hund05232 Selenicereus undatus HOM05D005492 ORTHO05D006911 2.6e-27 125.9 246 38.2
ATR0767G107 Amborella trichopoda HOM05D005492 ORTHO05D006911 5.9e-27 124.8 179 41.9
CBR_g37394 Chara braunii HOM05D005492 ORTHO05D006911 1.1e-25 120.6 175 42.3
Mapoly0013s0107 Marchantia polymorpha HOM05D005492 ORTHO05D006911 4.2e-25 118.6 174 42.5
Pp3c16_2350 Physcomitrium patens HOM05D005492 ORTHO05D006911 1.2e-24 117.1 180 41.1
PRCOL_00001807 Prasinoderma coloniale HOM05D005492 ORTHO05D006911 4.4e-22 108.6 167 40.1
ClCG11G014860 Citrullus lanatus HOM05D005492 ORTHO05D006911 1.4e-20 103.6 138 45.7
Cre02.g142350 Chlamydomonas reinhardtii HOM05D005492 ORTHO05D006911 4.5e-19 98.6 166 37.3
Atru.chr13.934 Acer truncatum HOM05D005492 ORTHO05D006911 9.4e-17 90.9 92 55.4
Duzib093G0511 Durio zibethinus HOM05D005492 ORTHO05D006911 2.1e-16 89.7 117 43.6
TAR381G1662 Trochodendron aralioides HOM05D005492 ORTHO05D006911 2.7e-16 89.4 92 54.3
MELO3C003490.2 Cucumis melo HOM05D005492 ORTHO05D006911 3.6e-16 89.0 92 53.3
Phvul.009G146200 Phaseolus vulgaris HOM05D005492 ORTHO05D006911 1.0e-15 87.4 92 53.3
DCAR_009548 Daucus carota HOM05D005492 ORTHO05D006911 2.3e-15 86.3 92 55.4
CSS0004398 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 3.0e-15 85.9 92 55.4
Nn5g29750 Nelumbo nucifera HOM05D005492 ORTHO05D006911 5.2e-15 85.1 43 95.3
FvH4_5g33720 Fragaria vesca HOM05D005492 ORTHO05D006911 8.8e-15 84.3 92 51.1
MBI16_g14677_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 8.8e-15 84.3 93 52.7
Haze_27628 Corylus avellana HOM05D005492 ORTHO05D006911 7.4e-14 81.3 176 35.8
THA.LOC104807850 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 2.8e-13 79.3 95 50.5
AagrBONN_evm.TU.Sc2ySwM_369.477 Anthoceros agrestis HOM05D005492 ORTHO05D006911 4.5e-11 72.0 92 43.5
Nn2g14030 Nelumbo nucifera HOM05D005492 ORTHO05D006911 4.5e-11 72.0 134 41.0
MD08G1145300 Malus domestica HOM05D005492 ORTHO05D006911 2.7e-08 62.8 75 46.7


User provided reference genes

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