Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06984 Davidia involucrata HOM05D000818 ORTHO05D001324 1.4e-45 186.0 101 100.0
Oeu014559.1 Olea europaea HOM05D000818 ORTHO05D001324 2.2e-19 99.0 76 69.7
Lj2C480T4 Lonicera japonica HOM05D000818 ORTHO05D001324 6.5e-19 97.4 69 75.4
Cc07_g11030 Coffea canephora HOM05D000818 ORTHO05D001324 8.5e-19 97.1 69 75.4
DCAR_014036 Daucus carota HOM05D000818 ORTHO05D001324 1.9e-18 95.9 69 75.4
Nitab4.5_0003187g0060 Nicotiana tabacum HOM05D000818 ORTHO05D001324 2.5e-18 95.5 69 75.4
Peaxi162Scf00328g00619 Petunia axillaris HOM05D000818 ORTHO05D001324 4.2e-18 94.7 69 73.9
Lj2g0011602 Lotus japonicus HOM05D000818 ORTHO05D001324 5.5e-18 94.4 69 72.5
CAN.G1274.28 Capsicum annuum HOM05D000818 ORTHO05D001324 7.2e-18 94.0 69 73.9
MELO3C007924.2 Cucumis melo HOM05D000818 ORTHO05D001324 7.2e-18 94.0 69 72.5
CsaV3_6G047330 Cucumis sativus L. HOM05D000818 ORTHO05D001324 7.2e-18 94.0 69 72.5
Duzib264G1309 Durio zibethinus HOM05D000818 ORTHO05D001324 9.4e-18 93.6 69 72.5
Duzib147G1443 Durio zibethinus HOM05D000818 ORTHO05D001324 1.2e-17 93.2 69 72.5
Actinidia28715 Actinidia chinensis HOM05D000818 ORTHO05D001324 1.6e-17 92.8 69 72.5
Prupe.7G171300 Prunus persica HOM05D000818 ORTHO05D001324 2.7e-17 92.0 69 71.0
Thecc.01G015000 Theobroma cacao HOM05D000818 ORTHO05D001324 2.7e-17 92.0 69 71.0
COL.COLO4_22458 Corchorus olitorius HOM05D000818 ORTHO05D001324 3.6e-17 91.7 69 69.6
QL06p051059 Quercus lobata HOM05D000818 ORTHO05D001324 3.6e-17 91.7 69 71.0
TPR.G34770 Trifolium pratense HOM05D000818 ORTHO05D001324 3.6e-17 91.7 69 69.6
CSS0045830 Camellia sinensis var. sinensis HOM05D000818 ORTHO05D001324 4.7e-17 91.3 69 71.0
Ca_24918_v3 Cicer arietinum L. HOM05D000818 ORTHO05D001324 4.7e-17 91.3 69 68.1
Glyma.11G078500 Glycine max HOM05D000818 ORTHO05D001324 4.7e-17 91.3 69 69.6
Solyc02g083610.4 Solanum lycopersicum HOM05D000818 ORTHO05D001324 4.7e-17 91.3 69 71.0
Sopen02g028390 Solanum pennellii HOM05D000818 ORTHO05D001324 4.7e-17 91.3 69 71.0
VMungo1215G2524 Vigna mungo HOM05D000818 ORTHO05D001324 4.7e-17 91.3 69 69.6
Glyma.01G164500 Glycine max HOM05D000818 ORTHO05D001324 6.1e-17 90.9 69 69.6
Medtr5g022530 Medicago truncatula HOM05D000818 ORTHO05D001324 6.1e-17 90.9 69 68.1
Nitab4.5_0022827g0010 Nicotiana tabacum HOM05D000818 ORTHO05D001324 6.1e-17 90.9 66 75.8
SalBow3G3960 Salvia bowleyana HOM05D000818 ORTHO05D001324 6.1e-17 90.9 69 71.0
Actinidia10553 Actinidia chinensis HOM05D000818 ORTHO05D001324 1.0e-16 90.1 69 69.6
CiPaw.08G130300 Carya illinoinensis HOM05D000818 ORTHO05D001324 1.0e-16 90.1 69 68.1
Psat2g153320 Pisum sativum HOM05D000818 ORTHO05D001324 1.0e-16 90.1 69 66.7
PGSC0003DMG400003581 Solanum tuberosum HOM05D000818 ORTHO05D001324 1.0e-16 90.1 69 69.6
Cfa006998 Carpinus fangiana HOM05D000818 ORTHO05D001324 1.8e-16 89.4 69 69.6
Duzib187G1541 Durio zibethinus HOM05D000818 ORTHO05D001324 2.3e-16 89.0 69 68.1
BcaB01g00533 Brassica carinata HOM05D000818 ORTHO05D001324 3.0e-16 88.6 69 66.7
ClCG01G020450 Citrullus lanatus HOM05D000818 ORTHO05D001324 3.0e-16 88.6 85 61.2
Lsat_1_v5_gn_4_145681 Lactuca sativa HOM05D000818 ORTHO05D001324 3.0e-16 88.6 69 68.1
Manes.02G105700 Manihot esculenta HOM05D000818 ORTHO05D001324 3.0e-16 88.6 69 69.6
vmacro18425 Vaccinium macrocarpon HOM05D000818 ORTHO05D001324 3.0e-16 88.6 70 72.9
AT3G51290 Arabidopsis thaliana HOM05D000818 ORTHO05D001324 5.1e-16 87.8 69 68.1
Haze_03734 Corylus avellana HOM05D000818 ORTHO05D001324 5.1e-16 87.8 69 68.1
Gohir.A02G172200 Gossypium hirsutum HOM05D000818 ORTHO05D001324 5.1e-16 87.8 69 66.7
Gohir.D03G007900 Gossypium hirsutum HOM05D000818 ORTHO05D001324 5.1e-16 87.8 69 66.7
Gorai.003G008100 Gossypium raimondii HOM05D000818 ORTHO05D001324 5.1e-16 87.8 69 66.7
Sp5g10930 Schrenkiella parvula HOM05D000818 ORTHO05D001324 5.1e-16 87.8 69 68.1
Atru.chr3.851 Acer truncatum HOM05D000818 ORTHO05D001324 6.7e-16 87.4 69 66.7
Lalb_Chr16g0377441 Lupinus albus HOM05D000818 ORTHO05D001324 6.7e-16 87.4 69 65.2
Manes.01G147200 Manihot esculenta HOM05D000818 ORTHO05D001324 8.8e-16 87.0 69 66.7
A09p44340 Brassica napus HOM05D000818 ORTHO05D001324 1.1e-15 86.7 69 65.2
C08p26570 Brassica napus HOM05D000818 ORTHO05D001324 1.1e-15 86.7 69 65.2
BolC8t50270H Brassica oleracea HOM05D000818 ORTHO05D001324 1.1e-15 86.7 69 65.2
BraA09t39895Z Brassica rapa HOM05D000818 ORTHO05D001324 1.1e-15 86.7 69 65.2
Thhalv10010132m.g Eutrema salsugineum HOM05D000818 ORTHO05D001324 1.1e-15 86.7 69 66.7
Sed0002852 Sechium edule HOM05D000818 ORTHO05D001324 1.1e-15 86.7 69 66.7
GSVIVG01018739001 Vitis vinifera HOM05D000818 ORTHO05D001324 1.1e-15 86.7 71 69.0
AL5G31710 Arabidopsis lyrata HOM05D000818 ORTHO05D001324 1.5e-15 86.3 69 66.7
CARHR160870 Cardamine hirsuta HOM05D000818 ORTHO05D001324 1.5e-15 86.3 69 66.7
SalBow3G3267 Salvia bowleyana HOM05D000818 ORTHO05D001324 1.5e-15 86.3 66 71.2
MD15G1242800 Malus domestica HOM05D000818 ORTHO05D001324 2.0e-15 85.9 69 65.2
Eucgr.J02464 Eucalyptus grandis HOM05D000818 ORTHO05D001324 2.6e-15 85.5 69 62.3
Aa31LG4G19290 Aethionema arabicum HOM05D000818 ORTHO05D001324 3.3e-15 85.1 69 65.2
CiPaw.07G060800 Carya illinoinensis HOM05D000818 ORTHO05D001324 3.3e-15 85.1 69 66.7
ECA232G2709 Erigeron canadensis HOM05D000818 ORTHO05D001324 3.3e-15 85.1 69 66.7
HanXRQChr13g0414601 Helianthus annuus HOM05D000818 ORTHO05D001324 3.3e-15 85.1 69 66.7
Carub.0005s1766 Capsella rubella HOM05D000818 ORTHO05D001324 4.4e-15 84.7 69 65.2
Potri.005G112300 Populus trichocarpa HOM05D000818 ORTHO05D001324 4.4e-15 84.7 69 66.7
FvH4_1g11480 Fragaria vesca HOM05D000818 ORTHO05D001324 7.4e-15 84.0 70 65.7
FAN19G1188 Fragaria x ananassa HOM05D000818 ORTHO05D001324 7.4e-15 84.0 70 65.7
FAN26G3190 Fragaria x ananassa HOM05D000818 ORTHO05D001324 7.4e-15 84.0 70 65.7
MSTRG.15580 Avicennia marina HOM05D000818 ORTHO05D001324 9.7e-15 83.6 69 66.7
TAR628G1292 Trochodendron aralioides HOM05D000818 ORTHO05D001324 9.7e-15 83.6 69 63.8
FAN23G2076 Fragaria x ananassa HOM05D000818 ORTHO05D001324 1.7e-14 82.8 70 64.3
RcHm_v2.0_Chr2g0099091 Rosa chinensis HOM05D000818 ORTHO05D001324 1.7e-14 82.8 69 65.2
Ah.03g149100 Amaranthus hybridus HOM05D000818 ORTHO05D001324 2.2e-14 82.4 69 63.8
FAN28G1188 Fragaria x ananassa HOM05D000818 ORTHO05D001324 2.2e-14 82.4 70 65.7
PSO293G0003 Papaver somniferum HOM05D000818 ORTHO05D001324 2.2e-14 82.4 69 63.8
THA.LOC109116899 Tarenaya hassleriana HOM05D000818 ORTHO05D001324 2.2e-14 82.4 69 63.8
PSO675G0382 Papaver somniferum HOM05D000818 ORTHO05D001324 3.7e-14 81.6 69 63.8
THA.LOC104821337 Tarenaya hassleriana HOM05D000818 ORTHO05D001324 3.7e-14 81.6 69 65.2
TWI09G1447 Tripterygium wilfordii HOM05D000818 ORTHO05D001324 3.7e-14 81.6 68 63.2
CANSAT25G2656 Cannabis sativa HOM05D000818 ORTHO05D001324 4.8e-14 81.3 68 61.8
Sabra05G0092200 Salix brachista HOM05D000818 ORTHO05D001324 4.8e-14 81.3 69 65.2
Sabra07G0048600 Salix brachista HOM05D000818 ORTHO05D001324 4.8e-14 81.3 69 62.3
MSTRG.23398 Avicennia marina HOM05D000818 ORTHO05D001324 6.3e-14 80.9 67 65.7
AUR62003341 Chenopodium quinoa HOM05D000818 ORTHO05D001324 6.3e-14 80.9 69 63.8
TAR376G0771 Trochodendron aralioides HOM05D000818 ORTHO05D001324 6.3e-14 80.9 69 65.2
Lsat_1_v5_gn_2_75801 Lactuca sativa HOM05D000818 ORTHO05D001324 8.2e-14 80.5 69 65.2
Potri.007G056700 Populus trichocarpa HOM05D000818 ORTHO05D001324 8.2e-14 80.5 70 61.4
Hund16501 Selenicereus undatus HOM05D000818 ORTHO05D001324 8.2e-14 80.5 69 60.9
Gohir.D11G046000 Gossypium hirsutum HOM05D000818 ORTHO05D001324 1.1e-13 80.1 69 65.2
Phvul.002G106900 Phaseolus vulgaris HOM05D000818 ORTHO05D001324 1.1e-13 80.1 69 62.3
AUR62029496 Chenopodium quinoa HOM05D000818 ORTHO05D001324 1.4e-13 79.7 66 65.2
Aqoxy6G02199 Aquilegia oxysepala HOM05D000818 ORTHO05D001324 2.4e-13 79.0 71 57.7
Lalb_Chr05g0212281 Lupinus albus HOM05D000818 ORTHO05D001324 4.1e-13 78.2 69 63.8
MBI09_g03718_MAGBIO Magnolia biondii HOM05D000818 ORTHO05D001324 5.3e-13 77.8 69 60.9
Hund14061 Selenicereus undatus HOM05D000818 ORTHO05D001324 5.3e-13 77.8 69 62.3
unitig_699.g19704 Utricularia gibba HOM05D000818 ORTHO05D001324 5.3e-13 77.8 69 56.5
Cpa.g.sc6.283 Carica papaya HOM05D000818 ORTHO05D001324 7.0e-13 77.4 55 74.5
HanXRQChr01g0026081 Helianthus annuus HOM05D020635 ORTHO05D001324 1.6e-12 76.3 69 63.8
Nn5g30763 Nelumbo nucifera HOM05D000818 ORTHO05D001324 1.6e-12 76.3 65 63.1
Ciclev10025182m.g Citrus clementina HOM05D000818 ORTHO05D001324 7.7e-12 73.9 68 54.4
SGA_v2.0_scaffold2G00967 Striga asiatica HOM05D000818 ORTHO05D001324 7.7e-12 73.9 80 55.0
HanXRQChr10g0306211 Helianthus annuus HOM05D020635 ORTHO05D001324 1.7e-11 72.8 57 68.4
arahy.Tifrunner.gnm1.ann1.BEDW22 Arachis hypogaea HOM05D000818 ORTHO05D001324 2.9e-11 72.0 56 69.6
arahy.Tifrunner.gnm1.ann1.FVJ9QC Arachis hypogaea HOM05D000818 ORTHO05D001324 2.9e-11 72.0 56 69.6
Dinv33652 Davidia involucrata HOM05D000818 ORTHO05D001324 3.8e-11 71.6 69 62.3
Sc16g0001990 Simmondsia chinensis HOM05D000818 ORTHO05D001324 5.0e-11 71.2 69 59.4
CDE05G1017 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 1.1e-10 70.1 69 58.0
Lalb_Chr09g0321621 Lupinus albus HOM05D000818 ORTHO05D001324 1.5e-10 69.7 53 67.9
Gorai.007G049300 Gossypium raimondii HOM05D000818 ORTHO05D001324 5.5e-10 67.8 69 58.0
Zm00001eb332010 Zea mays HOM05D000818 ORTHO05D001324 2.7e-09 65.5 68 50.0
CDE04G0810 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 3.6e-09 65.1 71 50.7
CDE05G2059 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 3.6e-09 65.1 71 52.1
SEGI_37967 Sequoiadendron giganteum HOM05D000818 ORTHO05D001324 3.6e-09 65.1 69 53.6
CDE02G1168 Ceratophyllum demersum HOM05D000818 ORTHO05D001324 1.0e-08 63.5 69 52.2
Os09g0538700 Oryza sativa ssp. japonica HOM05D000818 ORTHO05D001324 1.8e-08 62.8 68 48.5
HanXRQChr14g0441791 Helianthus annuus HOM05D000818 ORTHO05D001324 4.0e-08 61.6 69 52.2
Migut.H02177 Erythranthe guttata HOM05D000818 ORTHO05D001324 5.7e-07 57.8 69 52.2
ATR0712G148 Amborella trichopoda HOM05D000818 ORTHO05D001324 9.7e-07 57.0 69 46.4
HPP92_004935 Vanilla planifolia HOM05D000818 ORTHO05D001324 1.7e-06 56.2 68 42.6
ECA238G3985 Erigeron canadensis HOM05D000818 ORTHO05D001324 2.8e-06 55.5 70 50.0


User provided reference genes

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