Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06918 Davidia involucrata HOM05D006675 ORTHO05D008302 4.6e-91 337.8 164 100.0
Oeu017091.1 Olea europaea HOM05D006675 ORTHO05D008302 1.5e-81 306.2 165 89.7
Peaxi162Scf00052g00336 Petunia axillaris HOM05D006675 ORTHO05D008302 8.2e-80 300.4 159 89.9
GSVIVG01013027001 Vitis vinifera HOM05D006675 ORTHO05D008302 4.1e-79 298.1 159 89.3
Solyc08g076130.3 Solanum lycopersicum HOM05D006675 ORTHO05D008302 2.0e-78 295.8 159 89.3
Sopen08g024770 Solanum pennellii HOM05D006675 ORTHO05D008302 2.0e-78 295.8 159 89.3
CAN.G773.29 Capsicum annuum HOM05D006675 ORTHO05D008302 2.6e-78 295.4 159 89.3
Sc10g0009260 Simmondsia chinensis HOM05D006675 ORTHO05D008302 2.6e-78 295.4 159 87.4
Lj8A133G65 Lonicera japonica HOM05D006675 ORTHO05D008302 3.4e-78 295.0 159 88.1
PGSC0003DMG400003501 Solanum tuberosum HOM05D006675 ORTHO05D008302 3.4e-78 295.0 159 88.7
MELO3C013816.2 Cucumis melo HOM05D006675 ORTHO05D008302 7.7e-78 293.9 159 88.7
RcHm_v2.0_Chr7g0212211 Rosa chinensis HOM05D006675 ORTHO05D008302 1.0e-77 293.5 159 88.7
PGSC0003DMG400009297 Solanum tuberosum HOM05D006675 ORTHO05D008302 1.0e-77 293.5 159 88.7
CsaV3_3G001280 Cucumis sativus L. HOM05D006675 ORTHO05D008302 1.3e-77 293.1 159 88.1
QL12p001835 Quercus lobata HOM05D006675 ORTHO05D008302 1.7e-77 292.7 158 87.3
Ciclev10002637m.g Citrus clementina HOM05D006675 ORTHO05D008302 2.2e-77 292.4 159 87.4
TWI60G1033 Tripterygium wilfordii HOM05D006675 ORTHO05D008302 3.8e-77 291.6 159 84.9
Sed0011153 Sechium edule HOM05D006675 ORTHO05D008302 5.0e-77 291.2 159 88.1
CSS0012354 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 6.5e-77 290.8 159 86.8
CSS0042811 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 6.5e-77 290.8 159 86.8
CiPaw.12G069400 Carya illinoinensis HOM05D006675 ORTHO05D008302 6.5e-77 290.8 159 85.5
FvH4_5g23270 Fragaria vesca HOM05D006675 ORTHO05D008302 6.5e-77 290.8 159 88.1
FAN18G2874 Fragaria x ananassa HOM05D006675 ORTHO05D008302 6.5e-77 290.8 159 88.1
Manes.01G194600 Manihot esculenta HOM05D006675 ORTHO05D008302 6.5e-77 290.8 159 85.5
Thecc.03G311400 Theobroma cacao HOM05D006675 ORTHO05D008302 6.5e-77 290.8 159 86.2
Potri.001G135700 Populus trichocarpa HOM05D006675 ORTHO05D008302 8.5e-77 290.4 159 85.5
Duzib205G0370 Durio zibethinus HOM05D006675 ORTHO05D008302 1.1e-76 290.0 159 86.2
Atru.chr3.2397 Acer truncatum HOM05D006675 ORTHO05D008302 1.4e-76 289.7 159 88.7
FAN18G0120 Fragaria x ananassa HOM05D006675 ORTHO05D008302 1.9e-76 289.3 159 87.4
DCAR_024956 Daucus carota HOM05D006675 ORTHO05D008302 2.5e-76 288.9 159 86.2
Actinidia01330 Actinidia chinensis HOM05D006675 ORTHO05D008302 5.5e-76 287.7 152 89.5
Aqoxy5G00552 Aquilegia oxysepala HOM05D006675 ORTHO05D008302 5.5e-76 287.7 159 86.8
Prupe.4G182100 Prunus persica HOM05D006675 ORTHO05D008302 5.5e-76 287.7 160 86.2
SGA_v2.0_scaffold8G04421 Striga asiatica HOM05D006675 ORTHO05D008302 5.5e-76 287.7 159 84.3
COL.COLO4_16920 Corchorus olitorius HOM05D006675 ORTHO05D008302 7.2e-76 287.3 159 86.2
Eucgr.E01319 Eucalyptus grandis HOM05D006675 ORTHO05D008302 9.4e-76 287.0 156 84.0
MSTRG.1795 Avicennia marina HOM05D006675 ORTHO05D008302 1.6e-75 286.2 159 83.6
Cc08_g03740 Coffea canephora HOM05D006675 ORTHO05D008302 3.6e-75 285.0 159 84.3
HanXRQChr12g0362191 Helianthus annuus HOM05D006675 ORTHO05D008302 3.6e-75 285.0 159 85.5
Lalb_Chr16g0380971 Lupinus albus HOM05D006675 ORTHO05D008302 3.6e-75 285.0 159 83.0
AUR62007364 Chenopodium quinoa HOM05D006675 ORTHO05D008302 4.7e-75 284.6 159 84.3
ECA233G1922 Erigeron canadensis HOM05D006675 ORTHO05D008302 4.7e-75 284.6 159 84.9
Migut.E01322 Erythranthe guttata HOM05D006675 ORTHO05D008302 6.1e-75 284.3 159 84.3
Eucgr.E01313 Eucalyptus grandis HOM05D006675 ORTHO05D008302 6.1e-75 284.3 156 83.3
Thhalv10026368m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 6.1e-75 284.3 159 83.0
Cfa009033 Carpinus fangiana HOM05D006675 ORTHO05D008302 1.0e-74 283.5 159 83.6
Gohir.D03G176700 Gossypium hirsutum HOM05D006675 ORTHO05D008302 1.0e-74 283.5 159 83.6
PGR042G1238 Punica granatum HOM05D006675 ORTHO05D008302 1.0e-74 283.5 159 84.3
Haze_12062 Corylus avellana HOM05D006675 ORTHO05D008302 1.4e-74 283.1 159 84.3
Gohir.A03G000027 Gossypium hirsutum HOM05D006675 ORTHO05D008302 1.8e-74 282.7 159 84.3
Sp7g17730 Schrenkiella parvula HOM05D006675 ORTHO05D008302 2.3e-74 282.3 159 83.0
CANSAT21G2314 Cannabis sativa HOM05D006675 ORTHO05D008302 3.0e-74 282.0 159 83.6
Lj2g0021996 Lotus japonicus HOM05D006675 ORTHO05D008302 3.0e-74 282.0 159 81.8
VMungo1215G1847 Vigna mungo HOM05D006675 ORTHO05D008302 3.0e-74 282.0 159 82.4
SalBow8G0964 Salvia bowleyana HOM05D006675 ORTHO05D008302 3.9e-74 281.6 159 83.0
Duzib068G1343 Durio zibethinus HOM05D006675 ORTHO05D008302 1.1e-73 280.0 159 83.6
Rhsim06G0208000 Rhododendron simsii HOM05D006675 ORTHO05D008302 1.1e-73 280.0 159 84.3
THA.LOC104806177 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 1.1e-73 280.0 159 81.8
AL7G35150 Arabidopsis lyrata HOM05D006675 ORTHO05D008302 1.5e-73 279.6 159 82.4
Phvul.002G134300 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 1.5e-73 279.6 159 81.8
Carub.0007s2216 Capsella rubella HOM05D006675 ORTHO05D008302 2.0e-73 279.3 159 81.8
AT4G19003 Arabidopsis thaliana HOM05D006675 ORTHO05D008302 2.6e-73 278.9 159 81.8
BcaNung04023 Brassica carinata HOM05D006675 ORTHO05D008302 2.6e-73 278.9 159 82.4
Lsat_1_v5_gn_9_15400 Lactuca sativa HOM05D006675 ORTHO05D008302 2.6e-73 278.9 155 83.9
BraA01t01049Z Brassica rapa HOM05D006675 ORTHO05D008302 4.4e-73 278.1 159 81.8
THA.LOC104798450 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 4.4e-73 278.1 159 82.4
Medtr5g028000 Medicago truncatula HOM05D006675 ORTHO05D008302 5.7e-73 277.7 159 81.1
BcaC09g51446 Brassica carinata HOM05D000169 ORTHO05D008302 9.7e-73 276.9 159 81.1
BolC1t01279H Brassica oleracea HOM05D000169 ORTHO05D000542 9.7e-73 276.9 159 81.1
ClCG06G010630 Citrullus lanatus HOM05D006675 ORTHO05D008302 9.7e-73 276.9 171 80.7
Glyma.09G209600 Glycine max HOM05D006675 ORTHO05D008302 9.7e-73 276.9 159 80.5
C01p13040 Brassica napus HOM05D000169 ORTHO05D000542 1.7e-72 276.2 159 81.1
CARHR225840 Cardamine hirsuta HOM05D006675 ORTHO05D008302 1.7e-72 276.2 159 81.1
PSO170G4469 Papaver somniferum HOM05D006675 ORTHO05D008302 1.7e-72 276.2 159 81.8
unitig_61.g26418 Utricularia gibba HOM05D006675 ORTHO05D008302 3.7e-72 275.0 158 81.0
Glyma.01G011400 Glycine max HOM05D006675 ORTHO05D008302 1.1e-71 273.5 159 79.9
MD11G1243800 Malus domestica HOM05D006675 ORTHO05D008302 1.1e-71 273.5 160 81.2
Ca_25161_v3 Cicer arietinum L. HOM05D006675 ORTHO05D000003 1.8e-71 272.7 159 78.0
HanXRQChr14g0430781 Helianthus annuus HOM05D006675 ORTHO05D008302 2.4e-71 272.3 159 79.9
Aa31LG6G1700 Aethionema arabicum HOM05D006675 ORTHO05D008302 5.3e-71 271.2 159 79.2
Nn1g09734 Nelumbo nucifera HOM05D006675 ORTHO05D008302 1.2e-70 270.0 159 81.8
Thhalv10015765m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 2.0e-70 269.2 159 78.6
EL10Ac5g11997 Beta vulgaris HOM05D006675 ORTHO05D008302 7.7e-70 267.3 158 79.1
PSO017G0801 Papaver somniferum HOM05D006675 ORTHO05D008302 7.7e-70 267.3 159 80.5
ATR0796G253 Amborella trichopoda HOM05D006675 ORTHO05D008302 3.8e-69 265.0 159 78.6
HPP92_023365 Vanilla planifolia HOM05D006675 ORTHO05D008302 3.8e-69 265.0 159 78.0
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 3.0e-66 255.4 182 68.1
Zm00001eb157890 Zea mays HOM05D006675 ORTHO05D008302 6.7e-66 254.2 159 78.0
Mapoly0004s0185 Marchantia polymorpha HOM05D006675 ORTHO05D008302 2.8e-64 248.8 159 70.4
CDE02G0997 Ceratophyllum demersum HOM05D006675 ORTHO05D008302 4.8e-64 248.1 159 76.1
Nitab4.5_0002897g0050 Nicotiana tabacum HOM05D006675 ORTHO05D008302 2.7e-62 242.3 159 75.5
SEGI_13659 Sequoiadendron giganteum HOM05D006675 ORTHO05D008302 3.5e-62 241.9 159 70.4
Dinv29017 Davidia involucrata HOM05D006675 ORTHO05D008302 9.4e-60 233.8 132 85.6
SMO364G0912 Selaginella moellendorffii HOM05D006675 ORTHO05D008302 7.5e-57 224.2 157 63.7
Sabra01G0105000 Salix brachista HOM05D006675 ORTHO05D008302 1.7e-56 223.0 174 66.1
Pp3c15_1420 Physcomitrium patens HOM05D006675 ORTHO05D008302 2.2e-56 222.6 157 65.6
Nitab4.5_0002188g0010 Nicotiana tabacum HOM05D006675 ORTHO05D008302 1.4e-55 219.9 140 80.0
Gorai.003G186000 Gossypium raimondii HOM05D006675 ORTHO05D008302 6.5e-53 211.1 118 81.4
CBR_g10842 Chara braunii HOM05D006675 ORTHO05D008302 1.2e-51 206.8 156 59.6
SGA_v2.0_scaffold8G04249 Striga asiatica HOM05D006675 ORTHO05D008302 2.1e-51 206.1 119 81.5
TPR.G19460 Trifolium pratense HOM05D006675 ORTHO05D008302 2.8e-51 205.7 118 79.7
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea HOM05D006675 ORTHO05D008302 1.5e-49 199.9 117 75.2
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis HOM05D006675 ORTHO05D008302 3.5e-46 188.7 130 66.9
arahy.Tifrunner.gnm1.ann1.1JB7Z5 Arachis hypogaea HOM05D000001 ORTHO05D000003 3.3e-44 182.2 186 53.8
arahy.Tifrunner.gnm1.ann1.K4EES2 Arachis hypogaea HOM05D000001 ORTHO05D000003 3.3e-44 182.2 186 53.8
Cre02.g076400 Chlamydomonas reinhardtii HOM05D006675 ORTHO05D008302 1.0e-42 177.2 156 51.3
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 3.4e-41 172.2 93 82.8
vmacro00263 Vaccinium macrocarpon HOM05D006675 ORTHO05D008302 1.4e-39 166.8 95 82.1
Ah.12g055570 Amaranthus hybridus HOM05D000160 ORTHO05D008302 2.4e-39 166.0 115 73.9
Psat2g139880 Pisum sativum HOM05D006675 ORTHO05D008302 9.5e-36 154.1 91 76.9
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla HOM05D006675 ORTHO05D008302 8.0e-35 151.0 177 49.7
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea HOM05D006675 ORTHO05D008302 6.8e-34 147.9 109 63.3
GSVIVG01009131001 Vitis vinifera HOM05D006675 ORTHO05D008302 1.4e-31 140.2 82 76.8
PRCOL_00001914 Prasinoderma coloniale HOM05D006675 ORTHO05D008302 1.9e-31 139.8 159 44.7
MCO12G007 Micromonas commoda HOM05D006675 ORTHO05D008302 1.0e-29 134.0 157 40.8
Os01g0658500 Oryza sativa ssp. japonica HOM05D006675 ORTHO05D008302 1.2e-27 127.1 72 77.8
Actinidia29284 Actinidia chinensis HOM05D006675 ORTHO05D008302 2.9e-24 115.9 65 86.2
BcaB07g30589 Brassica carinata HOM05D006675 ORTHO05D008302 1.9e-20 103.2 81 60.5
A01p11020 Brassica napus HOM05D006675 ORTHO05D008302 6.2e-19 98.2 56 87.5
Hund14383 Selenicereus undatus HOM05D006675 ORTHO05D008302 8.1e-19 97.8 56 83.9
BcaB06g29627 Brassica carinata HOM05D006675 ORTHO05D008302 1.1e-18 97.4 82 63.4
Haze_08131 Corylus avellana HOM05D006675 ORTHO05D008302 3.2e-15 85.9 49 81.6
FAN13G1728 Fragaria x ananassa HOM05D006675 ORTHO05D008302 3.2e-15 85.9 49 81.6
CARHR288450 Cardamine hirsuta HOM05D006675 ORTHO05D008302 3.6e-11 72.4 53 56.6
Phvul.002G134150 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 2.2e-08 63.2 57 56.1
Gohir.D12G043050 Gossypium hirsutum HOM05D006675 ORTHO05D008302 2.4e-07 59.7 38 71.1


User provided reference genes

Program Settings