Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 0.0e+00 1373.2 710 100.0
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.3e-251 872.5 722 66.3
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 1.3e-227 793.5 732 64.8
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 1.4e-200 703.7 726 55.4
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 4.1e-200 702.2 918 50.2
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 2.5e-181 639.8 891 47.9
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 8.2e-177 624.8 736 51.1
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 3.8e-174 615.9 731 51.6
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 9.4e-173 611.3 787 50.1
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 6.5e-166 588.6 733 50.2
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 1.5e-162 577.4 740 49.6
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 1.7e-161 573.9 709 50.5
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 3.7e-161 572.8 733 49.1
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 2.4e-160 570.1 748 47.3
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 5.9e-159 565.5 728 48.1
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 6.5e-158 562.0 728 46.8
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 1.5e-157 560.8 715 48.0
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 1.2e-156 557.8 738 49.1
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 2.8e-156 556.6 731 46.8
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 3.4e-154 549.7 728 46.4
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 9.8e-154 548.1 729 47.2
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 1.3e-153 547.7 740 45.9
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 1.1e-152 544.7 716 49.0
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 5.4e-152 542.3 716 45.7
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 1.2e-148 531.2 732 46.7
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 4.4e-146 522.7 756 45.4
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.3e-145 521.2 722 45.8
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 2.9e-145 520.0 717 47.0
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 4.9e-145 519.2 733 45.4
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 1.1e-144 518.1 733 45.3
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.4e-144 517.7 722 45.7
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.4e-144 516.9 751 45.1
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 3.2e-144 516.5 674 48.1
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 6.0e-143 512.3 721 44.7
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 7.8e-143 511.9 726 45.3
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 2.3e-142 510.4 712 47.3
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 3.9e-142 509.6 741 43.0
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 5.0e-142 509.2 741 45.1
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 4.7e-140 502.7 754 43.8
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.1e-139 501.5 718 45.4
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 1.8e-139 500.7 723 44.7
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 6.8e-139 498.8 736 44.8
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 2.9e-137 493.4 680 46.0
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 1.4e-136 491.1 733 42.7
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 1.0e-134 485.0 707 47.7
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 1.3e-134 484.6 797 39.4
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 3.0e-134 483.4 732 44.3
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 6.6e-134 482.3 689 46.4
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 3.3e-133 479.9 739 44.5
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 8.1e-132 475.3 750 43.3
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 8.1e-132 475.3 750 43.3
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 1.1e-131 474.9 751 42.9
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 1.4e-123 448.0 712 42.6
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 1.5e-122 444.5 343 69.4
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 4.4e-122 443.0 586 47.4
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 1.7e-121 441.0 761 39.9
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 2.4e-120 437.2 690 41.4
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 1.2e-119 434.9 724 40.7
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 2.3e-118 430.6 744 39.8
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 1.9e-117 427.6 665 41.1
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 3.3e-117 426.8 793 38.5
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 1.2e-116 424.9 714 39.5
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.4e-115 421.4 714 41.3
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 2.4e-115 420.6 716 41.2
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 4.0e-115 419.9 811 40.0
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 5.2e-115 419.5 731 39.9
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 1.5e-114 417.9 731 39.0
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 2.2e-113 414.1 740 39.5
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 2.9e-113 413.7 738 40.1
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 6.4e-113 412.5 803 38.2
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 1.4e-112 411.4 738 40.2
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 4.2e-112 409.8 699 40.5
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 4.2e-112 409.8 719 39.8
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 4.2e-112 409.8 719 39.8
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 4.2e-112 409.8 719 39.8
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 4.2e-112 409.8 739 39.8
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 2.8e-108 397.1 599 41.7
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 3.9e-102 376.7 669 38.9
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 4.3e-101 373.2 739 35.3
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 6.4e-97 359.4 355 56.6
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 9.3e-96 355.5 709 36.5
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 3.0e-94 350.5 691 37.0
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 1.4e-91 341.7 520 40.4
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 9.0e-91 339.0 760 34.1
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 2.5e-88 330.9 716 34.1
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 1.6e-84 318.2 279 59.9
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 8.2e-84 315.8 668 37.0
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 6.9e-83 312.8 276 58.0
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 9.4e-72 275.8 418 43.5
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 1.2e-63 248.8 229 56.8
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.7e-63 247.7 257 57.6
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 7.4e-61 239.6 428 38.8
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 3.1e-59 234.2 396 41.4
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 1.0e-57 229.2 710 29.0
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 1.0e-54 219.2 519 33.1
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.0e-53 214.9 357 43.1
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 5.3e-51 206.8 518 31.7
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 2.2e-49 201.4 331 43.5
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 6.5e-49 199.9 162 69.8
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 7.7e-42 176.4 165 67.9
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 6.6e-41 173.3 358 36.9
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 1.5e-37 162.2 564 28.5
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 4.4e-37 160.6 311 40.2
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 2.7e-34 151.4 155 55.5
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.5e-32 144.8 132 60.6
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 4.4e-29 134.0 686 23.0
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 1.9e-27 128.6 329 34.0
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 7.0e-27 126.7 165 48.5
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 5.0e-25 120.6 90 64.4
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 5.0e-25 120.6 291 31.3
TAR629G2830 Trochodendron aralioides HOM05D006140 ORTHO05D007834 6.6e-25 120.2 189 48.7
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 2.5e-16 91.7 472 23.1
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 4.7e-15 87.4 133 42.1
SEGI_32981 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 1.1e-14 86.3 253 30.0
Os02g0128300 Oryza sativa ssp. japonica HOM05D006140 ORTHO05D007834 3.4e-13 81.3 155 32.9
unitig_32.g10972 Utricularia gibba HOM05D006140 ORTHO05D007834 3.4e-13 81.3 162 38.9
Oeu063929.1 Olea europaea HOM05D006140 ORTHO05D007834 5.8e-13 80.5 55 70.9
SMO367G0412 Selaginella moellendorffii HOM05D006140 ORTHO05D007834 2.7e-10 71.6 618 20.7
GSVIVG01012998001 Vitis vinifera HOM05D006140 ORTHO05D007834 2.7e-10 71.6 58 67.2
Medtr5g019630 Medicago truncatula HOM05D006140 ORTHO05D007834 3.9e-09 67.8 84 51.2
Duzib084G0453 Durio zibethinus HOM05D006140 ORTHO05D007834 5.1e-09 67.4 89 48.3
Cpa.g.sc5137.1 Carica papaya HOM05D006140 ORTHO05D007834 8.6e-09 66.6 111 42.3
AagrBONN_evm.TU.Sc2ySwM_344.4141 Anthoceros agrestis HOM05D006140 ORTHO05D007834 1.9e-08 65.5 177 28.8


User provided reference genes

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