Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06885 Davidia involucrata HOM05D053875 ORTHO05D000011 1.4e-75 286.2 148 100.0
Dinv15830 Davidia involucrata HOM05D053875 ORTHO05D000011 2.1e-74 282.3 148 97.3
Dinv06896 Davidia involucrata HOM05D000013 ORTHO05D000011 1.9e-27 126.3 122 68.9
Solyc08g076050.4 Solanum lycopersicum HOM05D000013 ORTHO05D000011 3.4e-24 115.5 122 54.1
Sopen08g024700 Solanum pennellii HOM05D000013 ORTHO05D000011 1.3e-23 113.6 122 53.3
Lj7A128T15 Lonicera japonica HOM05D000013 ORTHO05D000011 1.1e-22 110.5 121 49.6
Lj7A128T16 Lonicera japonica HOM05D000013 ORTHO05D000011 1.4e-22 110.2 121 49.6
Peaxi162Scf00408g00242 Petunia axillaris HOM05D000013 ORTHO05D000011 9.2e-22 107.5 118 55.9
CSS0017062 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 4.6e-21 105.1 120 47.5
PGSC0003DMG401009323 Solanum tuberosum HOM05D000013 ORTHO05D000011 1.3e-20 103.6 116 45.7
Dinv06894 Davidia involucrata HOM05D000013 ORTHO05D000011 2.5e-19 99.4 127 53.5
Cc08_g04060 Coffea canephora HOM05D000013 ORTHO05D000011 4.3e-19 98.6 129 49.6
Solyc08g076060.3 Solanum lycopersicum HOM05D000013 ORTHO05D000011 7.3e-19 97.8 118 43.2
CSS0002709 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 1.6e-18 96.7 122 48.4
DCAR_008195 Daucus carota HOM05D000013 ORTHO05D000011 2.8e-18 95.9 119 53.8
Dinv06886 Davidia involucrata HOM05D000013 ORTHO05D000011 1.4e-17 93.6 123 53.7
Lsat_1_v5_gn_6_73701 Lactuca sativa HOM05D000013 ORTHO05D000011 5.2e-17 91.7 136 38.2
Sopen08g024710 Solanum pennellii HOM05D000013 ORTHO05D000011 5.2e-17 91.7 118 40.7
Lsat_1_v5_gn_5_63520 Lactuca sativa HOM05D000013 ORTHO05D000011 8.9e-17 90.9 136 38.2
Dinv06887 Davidia involucrata HOM05D000013 ORTHO05D000011 1.2e-16 90.5 58 74.1
Dinv06897 Davidia involucrata HOM05D000013 ORTHO05D000011 1.2e-16 90.5 122 51.6
Lsat_1_v5_gn_6_73741 Lactuca sativa HOM05D000013 ORTHO05D000011 1.5e-16 90.1 136 38.2
Lsat_1_v5_gn_5_63420 Lactuca sativa HOM05D000013 ORTHO05D000011 4.4e-16 88.6 137 47.4
Dinv06892 Davidia involucrata HOM05D000013 ORTHO05D000011 5.8e-16 88.2 131 52.7
ECA238G0167 Erigeron canadensis HOM05D000013 ORTHO05D000011 5.8e-16 88.2 134 39.6
vmacro14217 Vaccinium macrocarpon HOM05D000013 ORTHO05D000011 5.8e-16 88.2 148 39.2
ECA240G4080 Erigeron canadensis HOM05D000013 ORTHO05D000011 7.5e-16 87.8 135 38.5
ECA240G4640 Erigeron canadensis HOM05D000013 ORTHO05D000011 2.2e-15 86.3 136 38.2
Lj7C129T1 Lonicera japonica HOM05D000013 ORTHO05D000011 2.9e-15 85.9 114 43.9
Dinv29035 Davidia involucrata HOM05D000013 ORTHO05D000011 4.9e-15 85.1 98 59.2
Dinv15832 Davidia involucrata HOM05D000013 ORTHO05D000011 1.9e-14 83.2 119 50.4
Lsat_1_v5_gn_6_73500 Lactuca sativa HOM05D000013 ORTHO05D000011 3.2e-14 82.4 134 36.6
Peaxi162Scf00408g00241 Petunia axillaris HOM05D000321 ORTHO05D000204 3.2e-14 82.4 120 40.0
Nitab4.5_0000809g0010 Nicotiana tabacum HOM05D000013 ORTHO05D000011 5.4e-14 81.6 119 50.4
HanXRQChr13g0412621 Helianthus annuus HOM05D000013 ORTHO05D000011 7.1e-14 81.3 135 36.3
HanXRQChr13g0414041 Helianthus annuus HOM05D000013 ORTHO05D000011 9.2e-14 80.9 135 36.3
ECA240G1121 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.6e-13 80.1 134 41.0
Lj8A323T48 Lonicera japonica HOM05D000013 ORTHO05D015669 2.1e-13 79.7 136 36.0
HanXRQChr13g0411601 Helianthus annuus HOM05D000013 ORTHO05D000011 2.7e-13 79.3 135 35.6
ECA247G1082 Erigeron canadensis HOM05D000102 ORTHO05D000011 7.8e-13 77.8 137 36.5
HanXRQChr13g0404711 Helianthus annuus HOM05D008481 ORTHO05D010853 1.3e-12 77.0 135 37.0
Lsat_1_v5_gn_6_73661 Lactuca sativa HOM05D000013 ORTHO05D010607 1.3e-12 77.0 126 37.3
CAN.G773.11 Capsicum annuum HOM05D000013 ORTHO05D000011 1.7e-12 76.6 149 34.9
HanXRQChr03g0081601 Helianthus annuus HOM05D000013 ORTHO05D000011 6.6e-12 74.7 143 35.0
Rhsim07G0135900 Rhododendron simsii HOM05D000013 ORTHO05D000011 6.6e-12 74.7 116 38.8
PGSC0003DMG402009323 Solanum tuberosum HOM05D000013 ORTHO05D000011 8.6e-12 74.3 118 38.1
Lsat_1_v5_gn_5_63541 Lactuca sativa HOM05D000013 ORTHO05D000011 5.6e-11 71.6 131 42.0
Nitab4.5_0001789g0010 Nicotiana tabacum HOM05D000013 ORTHO05D000011 9.5e-11 70.9 117 42.7
ECA240G3682 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.2e-10 70.5 118 35.6
QL06p010242 Quercus lobata HOM05D000013 ORTHO05D000011 1.2e-10 70.5 114 36.0
ECA240G2929 Erigeron canadensis HOM05D000321 ORTHO05D000204 4.7e-10 68.6 119 38.7
ECA246G5062 Erigeron canadensis HOM05D000013 ORTHO05D000011 4.7e-10 68.6 131 32.8
Lsat_1_v5_gn_5_63500 Lactuca sativa HOM05D000013 ORTHO05D000011 1.1e-09 67.4 127 35.4
Sabra16G0300600 Salix brachista HOM05D000013 ORTHO05D000011 1.1e-09 67.4 129 34.9
HanXRQChr13g0404661 Helianthus annuus HOM05D000013 ORTHO05D000011 2.4e-09 66.2 52 57.7
HanXRQChr03g0081681 Helianthus annuus HOM05D000013 ORTHO05D000011 5.2e-09 65.1 154 31.8
Potri.001G442200 Populus trichocarpa HOM05D000013 ORTHO05D000011 5.8e-08 61.6 124 32.3
HanXRQChr03g0081591 Helianthus annuus HOM05D000013 ORTHO05D000011 7.6e-08 61.2 130 33.1
QL04p082421 Quercus lobata HOM05D000013 ORTHO05D000011 7.6e-08 61.2 122 32.0
Dinv06891 Davidia involucrata HOM05D000013 ORTHO05D000011 9.9e-08 60.8 52 53.8
Sabra16G0298500 Salix brachista HOM05D000013 ORTHO05D000011 3.8e-07 58.9 131 32.8
QL06p010235 Quercus lobata HOM05D000013 ORTHO05D000011 1.1e-06 57.4 51 45.1
GSVIVG01038316001 Vitis vinifera HOM05D000013 ORTHO05D015669 1.1e-06 57.4 128 30.5
QL04p082006 Quercus lobata HOM05D000013 ORTHO05D000011 3.2e-06 55.8 133 30.1
Peaxi162Scf00408g00225 Petunia axillaris HOM05D000013 ORTHO05D014604 9.2e-06 54.3 93 35.5
Peaxi162Scf00408g00234 Petunia axillaris HOM05D000013 ORTHO05D015298 9.2e-06 54.3 93 37.6


User provided reference genes

Program Settings