Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 1.0e-104 383.6 222 100.0
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 5.2e-69 265.0 222 79.7
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 5.0e-64 248.4 226 69.0
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 9.5e-63 244.2 234 65.0
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.6e-54 216.9 215 64.2
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 5.6e-47 191.8 228 64.0
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 1.6e-46 190.3 222 64.4
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 2.9e-43 179.5 226 58.4
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 7.8e-41 171.4 239 48.1
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 6.6e-40 168.3 239 61.9
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 4.3e-39 165.6 243 51.9
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 1.2e-38 164.1 244 47.5
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 4.7e-38 162.2 234 58.1
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 4.0e-37 159.1 235 51.5
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 2.6e-36 156.4 237 48.5
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 4.4e-36 155.6 227 46.3
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 5.8e-36 155.2 246 54.1
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 9.8e-36 154.5 194 58.8
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 2.9e-35 152.9 235 49.4
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 4.9e-35 152.1 239 46.4
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 1.9e-34 150.2 195 52.8
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 1.9e-34 150.2 242 57.0
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 4.1e-34 149.1 228 48.7
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 9.2e-34 147.9 230 52.6
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 1.2e-33 147.5 233 54.1
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 4.6e-33 145.6 232 47.4
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 4.6e-33 145.6 245 44.1
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 1.7e-32 143.7 235 46.0
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 3.0e-32 142.9 246 45.5
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 2.5e-31 139.8 247 45.3
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 5.6e-31 138.7 246 42.7
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 7.3e-31 138.3 177 63.3
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 9.5e-31 137.9 232 45.7
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 6.2e-30 135.2 232 47.0
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 8.1e-30 134.8 244 42.6
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 1.1e-29 134.4 224 50.0
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 1.8e-29 133.7 232 44.8
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 1.8e-29 133.7 221 49.8
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 4.0e-29 132.5 247 46.6
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 1.2e-28 131.0 245 43.3
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 4.4e-28 129.0 247 51.0
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 5.8e-28 128.6 236 47.9
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 4.9e-27 125.6 227 48.0
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.9e-26 123.6 229 42.8
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 3.2e-26 122.9 234 44.4
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 3.2e-26 122.9 228 46.1
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 7.1e-26 121.7 237 43.0
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 3.5e-25 119.4 249 41.4
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 4.6e-25 119.0 229 41.9
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 4.6e-25 119.0 258 43.4
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 1.5e-23 114.0 233 42.1
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 4.3e-23 112.5 225 48.4
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 1.6e-22 110.5 227 49.8
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 4.7e-22 109.0 236 43.2
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 8.1e-22 108.2 252 40.9
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 1.1e-21 107.8 234 43.2
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 1.4e-21 107.5 261 41.8
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 1.8e-21 107.1 235 39.1
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 1.8e-21 107.1 222 43.7
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 5.2e-21 105.5 126 57.1
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 6.9e-21 105.1 226 44.2
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 6.9e-21 105.1 152 59.9
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 3.4e-20 102.8 226 38.9
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 3.4e-20 102.8 226 38.9
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 3.4e-20 102.8 226 38.9
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 5.8e-20 102.1 242 40.5
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 7.6e-20 101.7 226 38.5
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 9.9e-20 101.3 230 44.3
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 9.9e-20 101.3 227 40.1
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 2.9e-19 99.8 218 42.2
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 3.8e-19 99.4 219 38.4
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 4.9e-19 99.0 242 38.0
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 1.1e-18 97.8 226 38.5
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 5.4e-18 95.5 227 38.8
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 7.1e-18 95.1 233 47.2
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 7.1e-18 95.1 103 55.3
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 9.3e-18 94.7 242 36.8
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 1.2e-17 94.4 239 45.6
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 3.5e-17 92.8 126 48.4
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 3.5e-17 92.8 235 35.3
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 1.3e-16 90.9 185 50.8
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 1.3e-16 90.9 221 38.5
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 3.9e-16 89.4 152 50.7
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 1.1e-15 87.8 184 50.5
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 1.1e-15 87.8 231 34.6
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 1.5e-15 87.4 226 36.7
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 7.3e-15 85.1 236 45.3
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 1.1e-13 81.3 239 45.2
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 2.4e-13 80.1 176 50.0
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 3.1e-13 79.7 236 41.1
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 4.0e-13 79.3 230 40.4
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 1.4e-10 70.9 80 53.8
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 3.2e-10 69.7 125 44.0
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 3.6e-06 56.2 170 34.1


User provided reference genes

Program Settings