Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06708 Davidia involucrata HOM05D002660 ORTHO05D003902 9.5e-144 513.5 252 100.0
SHI41394 Sapria himalayana HOM05D002660 ORTHO05D003902 5.1e-12 75.9 225 31.1
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 2.0e-08 63.9 52 61.5
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 2.0e-08 63.9 51 58.8
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 4.4e-08 62.8 261 28.4
CAN.G140.15 Capsicum annuum HOM05D002660 ORTHO05D003902 7.6e-08 62.0 55 52.7
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 7.6e-08 62.0 55 52.7
Sed0024408 Sechium edule HOM05D002660 ORTHO05D003902 7.6e-08 62.0 50 64.0
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 1.7e-07 60.8 53 54.7
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 2.2e-07 60.5 55 52.7
AT2G07749 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 3.7e-07 59.7 54 59.3
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 3.7e-07 59.7 54 59.3
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 3.7e-07 59.7 54 59.3
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 3.7e-07 59.7 54 59.3
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 3.7e-07 59.7 54 59.3
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 3.7e-07 59.7 54 59.3
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 3.7e-07 59.7 54 59.3
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 3.7e-07 59.7 54 59.3
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 4.9e-07 59.3 54 57.4
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 4.9e-07 59.3 50 60.0
Medtr0212s0050 Medicago truncatula HOM05D002660 ORTHO05D003902 8.3e-07 58.5 51 58.8
Psat4g178320 Pisum sativum HOM05D002660 ORTHO05D003902 8.3e-07 58.5 51 58.8
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 1.1e-06 58.2 187 27.3
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 1.1e-06 58.2 53 52.8
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 1.4e-06 57.8 53 52.8
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 1.4e-06 57.8 53 52.8
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 1.9e-06 57.4 54 57.4
TAR371G0124 Trochodendron aralioides HOM05D002660 ORTHO05D003902 1.9e-06 57.4 56 50.0
Sed0012925 Sechium edule HOM05D002660 ORTHO05D003902 3.2e-06 56.6 61 42.6
Ca_07940_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 4.1e-06 56.2 51 56.9
Ca_08791_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 4.1e-06 56.2 51 56.9
Ca_22174_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 4.1e-06 56.2 51 56.9
Ca_26184_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 4.1e-06 56.2 51 56.9
Glyma.12G175100 Glycine max HOM05D002660 ORTHO05D003902 5.4e-06 55.8 51 52.9
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 7.1e-06 55.5 126 33.3
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 7.1e-06 55.5 126 33.3


User provided reference genes

Program Settings