Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06695 Davidia involucrata HOM05D003666 ORTHO05D004770 2.7e-49 198.4 99 100.0
Lj2C1223T18 Lonicera japonica HOM05D003666 ORTHO05D004770 2.9e-32 141.7 70 100.0
TAR626G1001 Trochodendron aralioides HOM05D003666 ORTHO05D004770 2.9e-32 141.7 70 100.0
Cfa023044 Carpinus fangiana HOM05D003666 ORTHO05D004770 8.6e-32 140.2 70 98.6
Aqoxy12s018 Aquilegia oxysepala HOM05D003666 ORTHO05D004770 1.5e-31 139.4 70 98.6
arahy.Tifrunner.gnm1.ann1.U43JHG Arachis hypogaea HOM05D003666 ORTHO05D004770 4.3e-31 137.9 70 98.6
arahy.Tifrunner.gnm1.ann1.WXF1XT Arachis hypogaea HOM05D003666 ORTHO05D004770 4.3e-31 137.9 70 98.6
Lalb_Chr00c24g0407401 Lupinus albus HOM05D003666 ORTHO05D004770 4.3e-31 137.9 70 98.6
Lalb_Chr00c54g0413611 Lupinus albus HOM05D003666 ORTHO05D004770 4.3e-31 137.9 70 98.6
RcHm_v2.0_MTg0498711 Rosa chinensis HOM05D003666 ORTHO05D004770 4.3e-31 137.9 70 98.6
TPR.G36115 Trifolium pratense HOM05D003666 ORTHO05D004770 4.3e-31 137.9 70 98.6
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 5.6e-31 137.5 69 98.6
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 5.6e-31 137.5 69 98.6
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 5.6e-31 137.5 69 98.6
Lsat_1_v5_gn_8_46780 Lactuca sativa HOM05D003666 ORTHO05D004770 7.3e-31 137.1 70 97.1
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 2.8e-30 135.2 68 98.5
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 6.1e-30 134.0 67 97.0
Potri.007G061861 Populus trichocarpa HOM05D003666 ORTHO05D004770 6.1e-30 134.0 70 97.1
arahy.Tifrunner.gnm1.ann1.AQ5GJP Arachis hypogaea HOM05D003666 ORTHO05D004770 1.5e-28 129.4 70 91.4
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 2.0e-28 129.0 69 91.3
BcaC05g26880 Brassica carinata HOM05D003666 ORTHO05D004770 3.4e-28 128.3 70 91.4
BNapus_Darmor_BZH_scaffold_234p00230 Brassica napus HOM05D003666 ORTHO05D004770 3.4e-28 128.3 70 91.4
Ah.10g028200 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.7e-27 125.9 70 92.9
Ah.10g028750 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.7e-27 125.9 70 92.9
Lsat_1_v5_gn_3_105380 Lactuca sativa HOM05D003666 ORTHO05D004770 3.7e-27 124.8 65 96.9
Nitab4.5_0006007g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.4e-26 122.9 70 90.0
Solyc00g500172.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.4e-26 122.9 70 90.0
Solyc00g500189.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.4e-26 122.9 70 90.0
Solyc00g500253.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.4e-26 122.9 70 90.0
Glyma.10G098500 Glycine max HOM05D003666 ORTHO05D004770 1.6e-25 119.4 65 89.2
arahy.Tifrunner.gnm1.ann1.W0GCEN Arachis hypogaea HOM05D003666 ORTHO05D004770 1.5e-23 112.8 59 98.3
BolSC28t60439H Brassica oleracea HOM05D003666 ORTHO05D004770 1.3e-19 99.8 61 83.6
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 1.4e-18 96.3 47 100.0
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 1.4e-18 96.3 47 100.0
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 1.4e-18 96.3 47 100.0
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 4.1e-18 94.7 47 97.9
Phvul.L002937 Phaseolus vulgaris HOM05D003666 ORTHO05D004770 7.0e-18 94.0 62 77.4
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 2.0e-17 92.4 47 97.9
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 2.7e-17 92.0 52 88.5
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 2.7e-17 92.0 48 95.8
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 1.7e-16 89.4 47 95.7
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 3.0e-16 88.6 47 93.6
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 3.0e-16 88.6 47 93.6
Thhalv10015926m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 3.9e-16 88.2 48 91.7
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 7.3e-15 84.0 55 78.2
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 9.5e-15 83.6 68 67.6
CDE02G1260 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 6.2e-14 80.9 41 97.6
BraSC48t46269Z Brassica rapa HOM05D003666 ORTHO05D004770 1.1e-13 80.1 44 90.9
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 8.9e-13 77.0 42 92.9
BcaC05g26875 Brassica carinata HOM05D003666 ORTHO05D004770 2.0e-12 75.9 42 88.1
Solyc10g045750.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 6.4e-11 70.9 62 61.3
Nitab4.5_0001291g0020 Nicotiana tabacum HOM05D003666 ORTHO05D004770 8.3e-11 70.5 81 50.6
Nitab4.5_0000172g0120 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.1e-09 65.9 46 76.1
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 1.7e-08 62.8 47 74.5
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 5.1e-08 61.2 42 81.0
SHI15675 Sapria himalayana HOM05D003666 ORTHO05D004770 5.6e-07 57.8 51 62.7
CARHR288310 Cardamine hirsuta HOM05D003666 ORTHO05D004770 7.3e-07 57.4 28 96.4


User provided reference genes

Program Settings