Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06690 Davidia involucrata HOM05D008168 ORTHO05D010284 6.3e-157 557.4 278 100.0
Actinidia34824 Actinidia chinensis HOM05D008168 ORTHO05D010284 7.5e-142 507.3 311 84.6
Nitab4.5_0001761g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 7.5e-118 427.6 270 84.1
HanXRQChr01g0029671 Helianthus annuus HOM05D008168 ORTHO05D010284 1.7e-101 373.2 204 92.6
TPR.G35326 Trifolium pratense HOM05D008168 ORTHO05D010284 2.2e-101 372.9 205 94.1
CiPaw.12G057800 Carya illinoinensis HOM05D008168 ORTHO05D010284 1.8e-95 353.2 183 97.3
Lsat_1_v5_gn_5_185960 Lactuca sativa HOM05D008168 ORTHO05D010284 1.2e-94 350.5 178 97.8
HanXRQChr08g0236051 Helianthus annuus HOM05D008168 ORTHO05D010284 3.2e-92 342.4 173 98.3
Sed0019148 Sechium edule HOM05D008168 ORTHO05D010284 4.2e-92 342.0 181 95.6
Nitab4.5_0004030g0020 Nicotiana tabacum HOM05D008168 ORTHO05D010284 3.3e-89 332.4 214 82.2
Nitab4.5_0000172g2220 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.5e-86 323.6 254 72.8
Cpa.g.sc263.12 Carica papaya HOM05D008168 ORTHO05D010284 4.2e-84 315.5 161 96.9
Sp3g25580 Schrenkiella parvula HOM05D008168 ORTHO05D010284 3.1e-71 272.7 185 78.9
Nitab4.5_0001919g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 3.6e-67 259.2 200 72.5
Nitab4.5_0000788g0030 Nicotiana tabacum HOM05D008168 ORTHO05D010284 6.1e-67 258.5 270 62.6
CAN.G1632.16 Capsicum annuum HOM05D008168 ORTHO05D010284 7.4e-65 251.5 125 97.6
CAN.G298.7 Capsicum annuum HOM05D008168 ORTHO05D010284 7.4e-65 251.5 125 97.6
Nitab4.5_0002558g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 7.4e-65 251.5 151 86.8
unitig_87.g27979 Utricularia gibba HOM05D008168 ORTHO05D010284 1.2e-62 244.2 125 94.4
CsaV3_6G025200 Cucumis sativus L. HOM05D008168 ORTHO05D010284 1.5e-57 227.3 120 93.3
CsaV3_6G025280 Cucumis sativus L. HOM05D008168 ORTHO05D010284 1.5e-57 227.3 120 93.3
Sp5g20300 Schrenkiella parvula HOM05D008168 ORTHO05D010284 1.5e-57 227.3 185 68.1
MBI05_g05357_MAGBIO Magnolia biondii HOM05D008168 ORTHO05D010284 1.7e-56 223.8 175 70.3
AT2G07641 Arabidopsis thaliana HOM05D008168 ORTHO05D010284 1.2e-54 217.6 117 94.0
CsaV3_6G024000 Cucumis sativus L. HOM05D008168 ORTHO05D010284 1.3e-53 214.2 112 94.6
BraSC159t45716Z Brassica rapa HOM05D008168 ORTHO05D010284 6.5e-53 211.8 118 92.4
Gohir.A03G133725 Gossypium hirsutum HOM05D008168 ORTHO05D010284 2.5e-52 209.9 141 77.3
FAN20G1169 Fragaria x ananassa HOM05D008168 ORTHO05D010284 5.2e-50 202.2 132 81.1
Nitab4.5_0000127g0080 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.1e-47 194.5 108 88.9
EL10Ac7g17837 Beta vulgaris HOM05D008168 ORTHO05D010284 1.7e-45 187.2 116 81.0
Thecc.08G162700 Theobroma cacao HOM05D008168 ORTHO05D010284 2.3e-42 176.8 117 75.2
FAN26G1478 Fragaria x ananassa HOM05D008168 ORTHO05D010284 4.0e-42 176.0 133 72.9
MBI10_g03713_MAGBIO Magnolia biondii HOM05D008168 ORTHO05D010284 1.2e-41 174.5 128 76.6
Nitab4.5_0006806g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 3.1e-31 139.8 87 83.9
RcHm_v2.0_MTg0498271 Rosa chinensis HOM05D008168 ORTHO05D010284 3.5e-30 136.3 105 75.2
CDE02G1379 Ceratophyllum demersum HOM05D008168 ORTHO05D010284 1.3e-29 134.4 88 79.5
Lsat_1_v5_gn_3_75761 Lactuca sativa HOM05D008168 ORTHO05D010284 4.2e-28 129.4 68 94.1
HanXRQChr08g0236041 Helianthus annuus HOM05D008168 ORTHO05D010284 1.8e-23 114.0 64 87.5
Lsat_1_v5_gn_5_185920 Lactuca sativa HOM05D008168 ORTHO05D010284 1.8e-23 114.0 64 87.5
ECA039G0001 Erigeron canadensis HOM05D008168 ORTHO05D010284 7.0e-23 112.1 64 85.9
BraSC54t46354Z Brassica rapa HOM05D008168 ORTHO05D010284 1.6e-22 110.9 104 60.6
Oeu008589.1 Olea europaea HOM05D008168 ORTHO05D010284 8.6e-21 105.1 63 84.1
Nitab4.5_0003774g0060 Nicotiana tabacum HOM05D001901 ORTHO05D001850 1.1e-20 104.8 147 49.7
Nitab4.5_0008578g0110 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.5e-20 104.4 68 82.4
AUR62043793 Chenopodium quinoa HOM05D008168 ORTHO05D010284 1.2e-19 101.3 55 90.9
AUR62043904 Chenopodium quinoa HOM05D008168 ORTHO05D010284 1.2e-19 101.3 55 90.9
AUR62043912 Chenopodium quinoa HOM05D008168 ORTHO05D010284 1.2e-19 101.3 55 90.9
Nitab4.5_0012067g0020 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.4e-15 87.8 73 69.9
Nitab4.5_0002240g0020 Nicotiana tabacum HOM05D000255 ORTHO05D000935 3.2e-15 86.7 50 82.0
Phvul.011G101750 Phaseolus vulgaris HOM05D008168 ORTHO05D010284 9.5e-12 75.1 37 91.9
Nitab4.5_0000733g0240 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.6e-09 67.0 73 53.4
Nitab4.5_0002418g0060 Nicotiana tabacum HOM05D017255 ORTHO05D022975 1.7e-08 64.3 64 57.8
Nn3g20243 Nelumbo nucifera HOM05D008168 ORTHO05D010284 3.2e-07 60.1 29 96.6


User provided reference genes

Program Settings