Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 2.0e-202 708.8 334 100.0
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 7.3e-184 647.1 323 92.9
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 7.3e-184 647.1 323 92.9
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 2.1e-183 645.6 321 92.2
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 4.0e-182 641.3 321 92.8
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 6.8e-182 640.6 321 92.2
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 2.0e-181 639.0 323 90.4
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.3e-180 636.3 323 91.6
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 1.7e-180 636.0 323 91.0
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.7e-180 636.0 323 90.4
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 4.9e-180 634.4 323 91.0
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 8.3e-180 633.6 321 90.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 4.1e-179 631.3 323 90.1
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 2.7e-178 628.6 323 89.8
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 2.3e-177 625.5 339 85.5
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 3.0e-177 625.2 321 88.2
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.9e-177 624.8 323 88.9
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.9e-177 624.8 323 88.9
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.9e-177 624.8 323 88.9
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 3.9e-177 624.8 323 89.5
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 5.1e-177 624.4 323 88.9
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 5.1e-177 624.4 323 88.9
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-176 623.2 323 88.9
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 1.5e-176 622.9 321 89.7
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.5e-176 622.1 323 88.9
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 2.5e-176 622.1 323 88.5
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 4.3e-176 621.3 323 88.2
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 4.3e-176 621.3 323 86.7
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.5e-176 620.2 323 88.9
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.2e-175 619.8 323 88.9
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 1.6e-175 619.4 323 88.9
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.6e-175 619.4 323 88.5
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.8e-175 618.6 323 89.2
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 4.7e-175 617.8 323 89.5
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 6.2e-175 617.5 323 89.5
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 2.3e-174 615.5 323 88.5
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 4.0e-174 614.8 323 87.0
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 4.0e-174 614.8 321 88.2
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.8e-174 614.0 323 87.9
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.2e-173 613.2 323 89.2
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.2e-173 613.2 323 89.2
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 2.0e-173 612.5 323 88.5
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.0e-173 612.5 323 86.1
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 3.4e-173 611.7 321 88.2
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 3.4e-173 611.7 323 88.2
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 5.8e-173 610.9 323 87.9
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 9.9e-173 610.1 323 87.9
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.3e-172 609.8 323 85.4
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 4.9e-172 607.8 321 87.9
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 6.4e-172 607.4 319 89.3
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 8.3e-172 607.1 323 88.2
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.1e-171 606.7 323 87.0
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 1.4e-171 606.3 323 85.4
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.9e-171 605.9 323 87.3
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 5.4e-171 604.4 327 84.7
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 5.4e-171 604.4 323 84.2
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 5.4e-171 604.4 321 87.2
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.1e-171 604.0 311 89.1
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 7.1e-171 604.0 321 85.7
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 9.2e-171 603.6 321 86.3
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 9.2e-171 603.6 344 82.3
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 2.1e-170 602.4 323 87.3
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 3.5e-170 601.7 321 84.4
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 3.5e-170 601.7 323 85.1
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.7e-169 599.4 321 85.7
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.3e-169 599.0 323 83.6
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.3e-169 599.0 323 83.6
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 6.6e-169 597.4 323 82.4
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.9e-168 595.9 319 85.3
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 7.3e-168 594.0 323 85.4
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.2e-167 593.2 321 86.6
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.2e-167 593.2 321 85.4
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.2e-167 593.2 323 85.8
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.8e-167 592.0 299 91.0
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 2.4e-166 589.0 323 83.6
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.3e-164 583.2 323 82.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 2.4e-163 578.9 323 81.7
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 4.2e-163 578.2 323 81.7
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 5.4e-163 577.8 323 81.4
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 7.1e-163 577.4 321 82.9
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.6e-162 576.2 321 84.1
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 2.1e-162 575.9 327 80.4
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 3.5e-162 575.1 323 81.1
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 3.5e-162 575.1 321 83.8
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.0e-161 573.5 323 83.3
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 3.9e-161 571.6 323 81.1
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 5.6e-160 567.8 350 76.3
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 1.3e-159 566.6 323 83.3
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.1e-158 563.5 323 80.2
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 4.0e-158 561.6 300 87.3
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 2.0e-157 559.3 323 78.6
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 2.6e-157 558.9 325 78.8
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.4e-155 552.4 323 81.4
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 3.5e-154 548.5 325 77.5
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 4.6e-154 548.1 321 81.6
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 4.6e-154 548.1 313 82.4
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 2.9e-148 528.9 321 78.2
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 4.2e-147 525.0 323 75.5
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.3e-145 520.0 275 86.5
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.3e-143 513.5 277 83.4
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.8e-142 509.6 346 69.4
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 1.8e-134 483.0 324 67.6
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.2e-133 480.3 321 67.9
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.9e-132 475.7 323 70.3
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.8e-132 475.3 321 67.6
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 2.3e-129 466.1 327 63.3
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 2.5e-123 446.0 332 61.4
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.2e-123 445.7 326 63.2
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 7.2e-123 444.5 255 80.8
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 4.6e-122 441.8 323 66.6
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 1.3e-108 397.1 324 55.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.3e-76 290.8 307 45.3
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-72 277.3 154 85.7
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 4.7e-66 255.8 310 41.6
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.4e-57 227.6 110 93.6
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.4e-57 227.6 110 93.6
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.1e-57 226.5 110 92.7
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 3.2e-54 216.5 185 58.4
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 4.8e-42 176.0 99 84.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 9.7e-11 72.0 40 77.5


User provided reference genes

Program Settings