Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06594 Davidia involucrata HOM05D005379 ORTHO05D006661 5.7e-86 320.9 160 100.0
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 7.5e-54 214.2 113 95.6
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 4.7e-48 194.9 137 67.9
Hma1.2p1_0456F.1_g156820 Hydrangea macrophylla HOM05D005379 ORTHO05D006661 1.1e-47 193.7 134 73.1
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 5.8e-46 188.0 130 76.2
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 1.2e-43 180.3 137 70.8
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 1.2e-43 180.3 149 65.1
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 5.1e-42 174.9 134 70.1
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 4.3e-41 171.8 134 64.9
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 6.2e-40 167.9 129 62.8
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 8.1e-40 167.5 130 65.4
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 1.4e-39 166.8 131 65.6
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 1.4e-39 166.8 131 65.6
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 1.8e-39 166.4 129 63.6
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 4.0e-39 165.2 133 65.4
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 4.0e-39 165.2 129 65.9
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 4.0e-39 165.2 133 63.2
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 1.2e-38 163.7 130 63.8
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 2.0e-38 162.9 129 61.2
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 7.6e-38 161.0 130 61.5
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 9.9e-38 160.6 133 57.9
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 4.9e-37 158.3 129 58.9
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 6.4e-37 157.9 133 59.4
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 6.4e-37 157.9 129 62.0
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 6.4e-37 157.9 130 62.3
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 1.9e-36 156.4 129 59.7
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 1.9e-36 156.4 129 60.5
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 2.4e-36 156.0 129 59.7
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 4.2e-36 155.2 130 63.1
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 4.2e-36 155.2 132 61.4
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 5.4e-36 154.8 129 58.9
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 5.4e-36 154.8 133 57.9
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 1.6e-35 153.3 134 59.0
Lalb_Chr16g0382791 Lupinus albus HOM05D005379 ORTHO05D006661 2.7e-35 152.5 129 56.6
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 3.5e-35 152.1 134 58.2
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 3.5e-35 152.1 130 60.8
Peaxi162Scf00304g01113 Petunia axillaris HOM05D005379 ORTHO05D006661 5.1e-34 148.3 133 56.4
Cpa.g.sc13.263 Carica papaya HOM05D005379 ORTHO05D006661 1.1e-33 147.1 129 55.8
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 1.1e-33 147.1 131 56.5
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 1.5e-33 146.7 129 61.2
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 2.5e-33 146.0 133 57.1
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 2.5e-33 146.0 131 58.8
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 3.3e-33 145.6 132 56.8
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 3.3e-33 145.6 133 57.1
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 7.3e-33 144.4 132 60.6
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 9.6e-33 144.1 129 57.4
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 1.3e-32 143.7 130 54.6
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 1.6e-32 143.3 133 54.1
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 2.1e-32 142.9 135 54.1
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 2.1e-32 142.9 133 57.1
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 2.1e-32 142.9 132 59.8
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 2.8e-32 142.5 130 54.6
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.8e-32 142.5 129 57.4
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 4.8e-32 141.7 129 55.0
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 6.2e-32 141.4 130 59.2
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 6.2e-32 141.4 138 55.8
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 1.1e-31 140.6 136 55.9
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.4e-31 140.2 129 55.0
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 1.8e-31 139.8 133 55.6
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 3.1e-31 139.0 135 53.3
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 9.0e-31 137.5 130 52.3
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 1.2e-30 137.1 142 55.6
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 1.5e-30 136.7 129 56.6
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 1.5e-30 136.7 133 54.9
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 2.0e-30 136.3 134 55.2
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 3.4e-30 135.6 131 55.0
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 3.4e-30 135.6 129 59.7
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 3.4e-30 135.6 161 47.8
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 4.5e-30 135.2 129 55.8
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 4.5e-30 135.2 130 54.6
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 7.6e-30 134.4 131 53.4
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 7.6e-30 134.4 131 53.4
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 7.6e-30 134.4 131 53.4
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 9.9e-30 134.0 132 56.8
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 1.3e-29 133.7 131 52.7
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 1.3e-29 133.7 131 52.7
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 1.7e-29 133.3 133 51.1
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 2.9e-29 132.5 129 53.5
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 6.4e-29 131.3 129 55.0
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 6.4e-29 131.3 129 54.3
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 1.4e-28 130.2 131 51.9
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 1.4e-28 130.2 135 53.3
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 1.4e-28 130.2 91 72.5
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 1.9e-28 129.8 133 53.4
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 3.2e-28 129.0 137 53.3
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 3.2e-28 129.0 139 54.0
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 4.2e-28 128.6 137 53.3
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 5.4e-28 128.3 129 54.3
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 2.7e-27 125.9 99 66.7
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 3.5e-27 125.6 133 50.4
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 4.6e-27 125.2 129 53.5
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 6.0e-27 124.8 134 53.0
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 1.8e-26 123.2 133 52.6
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 1.1e-25 120.6 125 55.2
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 1.5e-25 120.2 134 50.0
Manes.06G131601 Manihot esculenta HOM05D005379 ORTHO05D006661 9.6e-25 117.5 75 77.3
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 9.6e-25 117.5 129 51.2
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 1.3e-24 117.1 129 50.4
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 1.6e-24 116.7 73 74.0
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 4.8e-24 115.2 65 83.1
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 6.2e-24 114.8 106 57.5
Peaxi162Scf00167g00730 Petunia axillaris HOM05D005379 ORTHO05D006661 6.2e-24 114.8 74 70.3
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 9.0e-23 110.9 66 77.3
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 1.2e-22 110.5 72 72.2
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 5.8e-22 108.2 72 72.2
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 7.6e-22 107.8 70 72.9
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 2.2e-21 106.3 69 66.7
Zm00001eb105230 Zea mays HOM05D005379 ORTHO05D006661 4.9e-21 105.1 74 67.6
Ah.13g066300 Amaranthus hybridus HOM05D005379 ORTHO05D006661 2.1e-19 99.8 118 50.0
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 2.7e-19 99.4 84 61.9
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.1e-12 77.4 136 41.2
Lj1A976T72 Lonicera japonica HOM05D005379 ORTHO05D006661 2.7e-11 72.8 81 50.6
SMO361G0220 Selaginella moellendorffii HOM05D005379 ORTHO05D006661 7.9e-11 71.2 64 53.1
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 1.8e-10 70.1 101 41.6
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 3.0e-10 69.3 60 53.3
BcaB05g24017 Brassica carinata HOM05D005379 ORTHO05D006661 4.3e-09 65.5 133 37.6
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 6.3e-08 61.6 64 42.2
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 6.3e-08 61.6 96 36.5
CSS0008660 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 1.8e-07 60.1 145 34.5
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 5.3e-07 58.5 36 72.2


User provided reference genes

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