Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 6.5e-68 260.8 148 100.0
Dinv32831 Davidia involucrata HOM05D001089 ORTHO05D008438 4.8e-47 191.4 140 80.0
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 1.5e-19 100.1 147 51.7
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 1.5e-19 100.1 89 60.7
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 5.6e-19 98.2 121 56.2
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 2.8e-18 95.9 149 49.0
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 2.0e-16 89.7 93 60.2
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 2.6e-16 89.4 102 57.8
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 1.1e-14 84.0 147 47.6
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 4.1e-14 82.0 74 60.8
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 5.4e-14 81.6 128 46.1
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 1.2e-13 80.5 182 39.0
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 2.1e-13 79.7 141 45.4
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 2.7e-13 79.3 139 46.8
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 3.5e-13 79.0 155 41.9
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 4.6e-13 78.6 150 42.0
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 1.0e-12 77.4 99 48.5
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 1.3e-12 77.0 145 41.4
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 1.3e-12 77.0 153 39.9
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 8.6e-12 74.3 167 41.9
Prupe.6G089500 Prunus persica HOM05D016629 ORTHO05D008438 8.6e-12 74.3 101 51.5
COL.COLO4_18404 Corchorus olitorius HOM05D007431 ORTHO05D008438 1.1e-11 73.9 74 55.4
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 1.1e-11 73.9 66 63.6
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 1.5e-11 73.6 149 40.9
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 1.9e-11 73.2 147 40.8
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 1.9e-11 73.2 159 42.1
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 1.9e-11 73.2 139 41.7
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 1.9e-11 73.2 147 40.8
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 2.5e-11 72.8 146 41.8
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 3.3e-11 72.4 131 43.5
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 4.3e-11 72.0 145 39.3
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 7.3e-11 71.2 69 59.4
PSO339G3784 Papaver somniferum HOM05D007431 ORTHO05D008438 7.3e-11 71.2 137 36.5
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 1.6e-10 70.1 65 60.0
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 2.1e-10 69.7 151 37.7
CiPaw.14G074700 Carya illinoinensis HOM05D023024 ORTHO05D008438 3.6e-10 68.9 147 42.9
Eucgr.B01149 Eucalyptus grandis HOM05D007431 ORTHO05D008438 3.6e-10 68.9 144 38.9
MBI18_g47623_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 3.6e-10 68.9 77 53.2
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 6.2e-10 68.2 152 36.8
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 8.1e-10 67.8 67 53.7
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 8.1e-10 67.8 67 53.7
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 8.1e-10 67.8 67 53.7
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 8.1e-10 67.8 110 38.2
CsaV3_6G021930 Cucumis sativus L. HOM05D021867 ORTHO05D008438 8.1e-10 67.8 162 38.9
Nn2g10588 Nelumbo nucifera HOM05D007431 ORTHO05D008438 1.1e-09 67.4 62 61.3
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 1.4e-09 67.0 67 55.2
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 1.4e-09 67.0 165 39.4
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 1.4e-09 67.0 144 42.4
AUR62022321 Chenopodium quinoa HOM05D007431 ORTHO05D008438 1.8e-09 66.6 129 40.3
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 2.4e-09 66.2 67 52.2
CDE02G3020 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 2.4e-09 66.2 147 38.1
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 2.4e-09 66.2 79 48.1
VMungo0647G2370 Vigna mungo HOM05D007431 ORTHO05D008438 2.4e-09 66.2 166 37.3
CARHR068680 Cardamine hirsuta HOM05D007431 ORTHO05D008438 3.1e-09 65.9 93 45.2
Lsat_1_v5_gn_8_91980 Lactuca sativa HOM05D007431 ORTHO05D008438 4.0e-09 65.5 135 41.5
MBI11_g07544_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 4.0e-09 65.5 155 40.0
THA.LOC104799471 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 4.0e-09 65.5 138 40.6
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 5.2e-09 65.1 145 37.2
Nitab4.5_0002380g0010 Nicotiana tabacum HOM05D015294 ORTHO05D018867 6.8e-09 64.7 123 43.1
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 6.8e-09 64.7 169 36.7
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 8.9e-09 64.3 141 39.0
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 8.9e-09 64.3 71 53.5
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 8.9e-09 64.3 143 39.9
Ciclev10028956m.g Citrus clementina HOM05D007431 ORTHO05D008438 8.9e-09 64.3 198 35.4
TWI53G0129 Tripterygium wilfordii HOM05D007431 ORTHO05D008438 1.5e-08 63.5 87 49.4
Cfa011407 Carpinus fangiana HOM05D023024 ORTHO05D008438 2.0e-08 63.2 162 38.9
PSO384G2622 Papaver somniferum HOM05D007431 ORTHO05D008438 2.0e-08 63.2 137 35.0
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 2.6e-08 62.8 145 37.9
Phvul.001G035300 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 2.6e-08 62.8 99 45.5
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 3.4e-08 62.4 90 43.3
THA.LOC104814853 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 4.4e-08 62.0 116 42.2
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 5.8e-08 61.6 106 39.6
DCAR_011227 Daucus carota HOM05D007431 ORTHO05D008438 5.8e-08 61.6 116 44.0
DCAR_011228 Daucus carota HOM05D007431 ORTHO05D008438 5.8e-08 61.6 116 44.0
Ca_13166_v3 Cicer arietinum L. HOM05D007431 ORTHO05D008438 9.9e-08 60.8 183 35.0
TPR.G26566 Trifolium pratense HOM05D007431 ORTHO05D008438 9.9e-08 60.8 158 37.3
MBI15_g23251_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.3e-07 60.5 152 38.8
Aqoxy4G03128 Aquilegia oxysepala HOM05D007431 ORTHO05D008438 1.7e-07 60.1 138 41.3
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 1.7e-07 60.1 110 41.8
Manes.07G083300 Manihot esculenta HOM05D007431 ORTHO05D008438 2.2e-07 59.7 55 54.5
C03p13110 Brassica napus HOM05D007431 ORTHO05D008438 6.4e-07 58.2 118 41.5
BraA03t10450Z Brassica rapa HOM05D007431 ORTHO05D008438 6.4e-07 58.2 120 39.2
Haze_23978 Corylus avellana HOM05D023024 ORTHO05D008438 6.4e-07 58.2 162 35.8
Migut.E00592 Erythranthe guttata HOM05D007431 ORTHO05D008438 6.4e-07 58.2 84 45.2
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 6.4e-07 58.2 152 36.2
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 8.4e-07 57.8 140 36.4
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 1.1e-06 57.4 148 35.1
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-06 57.4 82 45.1
MBI15_g23247_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.1e-06 57.4 126 38.1
ECA238G2926 Erigeron canadensis HOM05D007431 ORTHO05D008438 1.4e-06 57.0 134 37.3
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 3.2e-06 55.8 122 41.8
Nitab4.5_0004839g0050 Nicotiana tabacum HOM05D015294 ORTHO05D018867 3.2e-06 55.8 162 36.4
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 3.2e-06 55.8 150 34.7
A03p11360 Brassica napus HOM05D007431 ORTHO05D008438 5.4e-06 55.1 98 40.8
Migut.E00657 Erythranthe guttata HOM05D007431 ORTHO05D008438 5.4e-06 55.1 102 41.2
MD03G1106700 Malus domestica HOM05D016629 ORTHO05D008438 7.1e-06 54.7 139 37.4
Potri.013G126701 Populus trichocarpa HOM05D007431 ORTHO05D008438 7.1e-06 54.7 94 37.2
Peaxi162Scf00616g00064 Petunia axillaris HOM05D015294 ORTHO05D018867 9.2e-06 54.3 148 37.8


User provided reference genes

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