Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 1.4e-78 296.2 145 100.0
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 3.3e-40 168.7 97 89.7
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 3.3e-40 168.7 97 89.7
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.7e-36 156.4 98 81.6
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.7e-36 156.4 98 81.6
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 1.7e-36 156.4 97 79.4
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 3.2e-35 152.1 97 78.4
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 4.2e-35 151.8 97 78.4
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 7.1e-35 151.0 97 80.4
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.2e-34 150.2 99 74.7
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 2.1e-34 149.4 99 74.7
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 2.1e-34 149.4 99 75.8
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 2.1e-34 149.4 97 79.4
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.5e-34 148.7 97 76.3
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 3.5e-34 148.7 101 74.3
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 4.6e-34 148.3 97 76.3
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 1.0e-33 147.1 103 73.8
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 1.0e-33 147.1 99 74.7
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 1.3e-33 146.7 97 76.3
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 2.3e-33 146.0 97 74.2
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 3.0e-33 145.6 97 77.3
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 3.0e-33 145.6 97 76.3
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 3.0e-33 145.6 97 76.3
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 5.1e-33 144.8 97 75.3
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 5.1e-33 144.8 99 74.7
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 5.1e-33 144.8 99 75.8
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 6.7e-33 144.4 97 73.2
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 6.7e-33 144.4 97 75.3
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 8.7e-33 144.1 96 74.0
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 8.7e-33 144.1 97 75.3
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 8.7e-33 144.1 97 77.3
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 1.1e-32 143.7 97 78.4
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 1.9e-32 142.9 97 75.3
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 3.3e-32 142.1 97 74.2
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 4.3e-32 141.7 97 73.2
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 4.3e-32 141.7 103 67.0
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 4.3e-32 141.7 103 67.0
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 4.3e-32 141.7 98 74.5
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 7.4e-32 141.0 98 73.5
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 1.3e-31 140.2 97 74.2
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 1.3e-31 140.2 97 73.2
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 1.6e-31 139.8 97 72.2
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.6e-31 139.8 93 76.3
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 1.6e-31 139.8 97 72.2
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 1.6e-31 139.8 97 72.2
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 2.1e-31 139.4 97 72.2
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 3.7e-31 138.7 104 69.2
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.7e-31 138.7 104 69.2
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 4.8e-31 138.3 97 73.2
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 4.8e-31 138.3 98 72.4
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 6.2e-31 137.9 96 69.8
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 6.2e-31 137.9 99 68.7
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 8.1e-31 137.5 97 73.2
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 8.1e-31 137.5 99 68.7
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.1e-30 137.1 106 67.0
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 1.1e-30 137.1 105 67.6
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 1.4e-30 136.7 97 72.2
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.4e-30 136.7 97 72.2
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 1.8e-30 136.3 97 70.1
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 1.8e-30 136.3 97 69.1
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 2.4e-30 136.0 96 70.8
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 2.4e-30 136.0 93 76.3
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 3.1e-30 135.6 96 70.8
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 4.0e-30 135.2 96 70.8
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 4.0e-30 135.2 96 70.8
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 4.0e-30 135.2 96 70.8
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 4.0e-30 135.2 97 73.2
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 5.3e-30 134.8 96 70.8
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 5.3e-30 134.8 96 70.8
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 5.3e-30 134.8 96 71.9
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 6.9e-30 134.4 96 70.8
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 6.9e-30 134.4 96 71.9
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 6.9e-30 134.4 96 69.8
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 6.9e-30 134.4 96 68.8
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 9.0e-30 134.0 84 78.6
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 9.0e-30 134.0 91 74.7
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 9.0e-30 134.0 83 78.3
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 1.5e-29 133.3 96 68.8
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 2.6e-29 132.5 96 68.8
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 2.6e-29 132.5 96 68.8
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 2.6e-29 132.5 96 68.8
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 3.4e-29 132.1 97 69.1
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 3.4e-29 132.1 84 77.4
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 3.4e-29 132.1 97 67.0
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 5.8e-29 131.3 96 69.8
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 5.8e-29 131.3 97 68.0
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 7.6e-29 131.0 81 77.8
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 9.9e-29 130.6 98 70.4
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 3.8e-28 128.6 96 66.7
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 4.9e-28 128.3 99 64.6
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 6.4e-28 127.9 97 66.0
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 8.4e-28 127.5 97 66.0
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.1e-27 127.1 95 66.3
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 6.7e-25 117.9 96 60.4
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 1.3e-23 113.6 76 72.4
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 1.3e-23 113.6 76 72.4
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 1.4e-22 110.2 79 73.4
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 2.9e-20 102.4 97 53.6
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 2.1e-18 96.3 96 49.0
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 1.3e-17 93.6 98 53.1
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 9.7e-16 87.4 96 49.0
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 8.2e-15 84.3 97 46.4
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 1.3e-12 77.0 92 48.9
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 4.3e-08 62.0 110 31.8
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.1e-06 57.4 29 86.2
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 1.4e-06 57.0 90 43.3
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 1.4e-06 57.0 90 43.3
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 3.1e-06 55.8 28 89.3
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 4.1e-06 55.5 81 37.0


User provided reference genes

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