Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.8e-257 892.1 471 100.0
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 8.1e-181 637.5 447 76.3
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 2.9e-178 629.0 453 75.5
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 2.7e-176 622.5 455 72.7
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 6.0e-176 621.3 452 73.7
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.8e-175 619.8 442 74.9
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 5.1e-175 618.2 450 74.7
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 2.4e-172 609.4 463 71.5
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 1.2e-171 607.1 517 66.2
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 3.4e-171 605.5 475 72.8
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 7.6e-171 604.4 453 70.9
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 8.4e-170 600.9 451 72.3
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 2.7e-168 595.9 450 70.9
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 5.1e-167 591.7 450 70.9
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 3.1e-164 582.4 453 68.2
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 1.2e-163 580.5 454 71.8
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 3.4e-163 578.9 455 70.8
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 4.5e-163 578.6 451 72.3
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 4.2e-161 572.0 451 67.8
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 8.2e-157 557.8 428 71.3
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 5.3e-156 555.1 416 69.7
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 2.0e-155 553.1 467 68.3
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 9.4e-153 544.3 451 67.0
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 3.6e-152 542.3 456 68.2
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.0e-151 540.8 453 66.7
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 1.0e-151 540.8 456 68.0
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 1.4e-151 540.4 453 66.0
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 1.8e-151 540.0 453 66.9
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 3.9e-151 538.9 453 66.4
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 5.1e-151 538.5 456 67.8
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 6.7e-151 538.1 453 65.6
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 1.3e-149 533.9 469 64.6
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 6.3e-149 531.6 459 65.1
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 3.4e-147 525.8 454 65.0
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 3.4e-147 525.8 455 66.8
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 7.7e-147 524.6 456 67.1
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 6.5e-146 521.5 455 66.2
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 1.9e-145 520.0 400 69.2
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 1.9e-145 520.0 455 62.9
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 3.2e-145 519.2 393 73.5
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 3.2e-145 519.2 455 65.1
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 4.2e-145 518.8 457 62.8
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 8.0e-144 514.6 453 64.0
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 1.8e-143 513.5 451 63.9
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 3.0e-143 512.7 457 64.6
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 4.4e-142 508.8 454 61.0
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 4.4e-142 508.8 454 64.5
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 3.8e-138 495.7 312 79.2
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 5.0e-138 495.4 451 63.2
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 1.1e-137 494.2 311 79.1
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 2.5e-137 493.0 456 62.5
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.2e-136 490.7 292 86.0
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 8.0e-136 488.0 484 58.3
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 8.8e-135 484.6 465 63.0
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.3e-134 482.6 474 61.0
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 7.5e-134 481.5 461 62.3
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 7.5e-134 481.5 473 60.7
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 9.7e-134 481.1 473 61.3
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 8.2e-133 478.0 457 61.1
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 2.0e-131 473.4 463 60.0
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 3.5e-131 472.6 449 59.7
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 4.5e-131 472.2 458 58.7
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 5.9e-131 471.9 321 72.9
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 1.7e-130 470.3 453 60.3
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 6.5e-130 468.4 323 76.8
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 8.5e-130 468.0 386 67.1
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 3.2e-129 466.1 388 67.8
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 7.2e-129 464.9 457 60.2
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 6.1e-128 461.8 459 60.8
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 2.3e-127 459.9 449 61.5
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 3.7e-125 452.6 448 58.3
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 4.8e-125 452.2 464 59.9
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 2.4e-124 449.9 459 60.3
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 5.9e-123 445.3 457 59.1
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 5.9e-123 445.3 459 58.2
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 1.7e-122 443.7 460 58.9
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 3.8e-122 442.6 445 54.4
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 8.6e-122 441.4 460 57.2
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 1.9e-121 440.3 434 57.1
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 6.1e-120 435.3 456 56.6
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 3.7e-117 426.0 464 56.9
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 6.3e-117 425.2 464 57.3
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 5.8e-110 402.1 247 80.2
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 2.4e-108 396.7 448 54.2
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 7.0e-108 395.2 406 55.4
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 3.9e-106 389.4 516 46.9
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 1.1e-103 381.3 387 54.0
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 9.8e-102 374.8 378 57.1
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 3.7e-101 372.9 426 54.2
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 3.5e-99 366.3 329 61.7
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.6e-96 357.5 409 52.1
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 2.1e-96 357.1 277 70.0
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 3.4e-94 349.7 382 54.5
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 1.1e-92 344.7 433 51.3
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 5.6e-89 332.4 482 47.1
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 8.7e-82 308.5 480 42.5
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 1.5e-81 307.8 376 49.7
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 2.1e-80 303.9 450 42.7
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.4e-76 290.4 471 40.3
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 5.3e-71 272.7 155 87.7
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 8.4e-69 265.4 387 50.6
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 1.1e-65 255.0 218 62.4
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 7.4e-57 225.7 362 39.5
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 3.5e-51 206.8 207 50.2
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 5.3e-47 193.0 177 63.3
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.4e-39 168.3 185 48.1
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 3.2e-20 104.0 176 42.6
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 1.5e-17 95.1 164 43.3
Aa31LG1G6410 Aethionema arabicum HOM05D007103 ORTHO05D008948 7.5e-17 92.8 103 51.5
Ciclev10006333m.g Citrus clementina HOM05D007103 ORTHO05D008948 5.4e-15 86.7 67 70.1
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 3.4e-09 67.4 42 76.2
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 1.4e-07 62.0 37 73.0


User provided reference genes

Program Settings