Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06180 Davidia involucrata HOM05D002974 ORTHO05D002992 3.0e-63 245.0 122 100.0
QL07p010402 Quercus lobata HOM05D002974 ORTHO05D002992 1.3e-24 116.7 130 51.5
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 7.6e-22 107.5 104 57.7
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 3.8e-21 105.1 125 54.4
Dinv12041 Davidia involucrata HOM05D002974 ORTHO05D002992 1.4e-20 103.2 82 73.2
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 2.4e-20 102.4 122 50.8
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 1.3e-18 96.7 105 50.5
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 3.9e-18 95.1 109 49.5
Sabra16G0038800 Salix brachista HOM05D002974 ORTHO05D002992 3.9e-18 95.1 109 46.8
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 5.1e-18 94.7 112 55.4
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 5.1e-18 94.7 118 47.5
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 5.1e-18 94.7 104 52.9
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 5.1e-18 94.7 109 48.6
Thecc.05G134100 Theobroma cacao HOM05D002974 ORTHO05D002992 1.9e-17 92.8 101 52.5
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 2.5e-17 92.4 106 54.7
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 3.3e-17 92.0 105 50.5
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 7.3e-17 90.9 109 53.2
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 6.2e-16 87.8 124 43.5
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 2.4e-15 85.9 104 51.0
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 4.0e-15 85.1 120 44.2
Rhsim04G0111200 Rhododendron simsii HOM05D002974 ORTHO05D002992 4.0e-15 85.1 99 47.5
Rhsim04G0112500 Rhododendron simsii HOM05D002974 ORTHO05D002992 4.0e-15 85.1 99 47.5
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 6.9e-15 84.3 108 45.4
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 9.0e-15 84.0 99 53.5
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 2.0e-14 82.8 122 41.8
Manes.09G004900 Manihot esculenta HOM05D002974 ORTHO05D002992 5.8e-14 81.3 119 44.5
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 5.8e-14 81.3 105 48.6
Eucgr.A02242 Eucalyptus grandis HOM05D002974 ORTHO05D002992 1.7e-13 79.7 120 43.3
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 2.2e-13 79.3 109 45.9
Sabra06G0026200 Salix brachista HOM05D002974 ORTHO05D002992 2.9e-13 79.0 104 44.2
Lalb_Chr22g0357431 Lupinus albus HOM05D002974 ORTHO05D002992 4.9e-13 78.2 125 44.8
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 8.4e-13 77.4 121 44.6
CiPaw.09G047800 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.4e-12 76.6 119 47.1
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 1.2e-11 73.6 112 47.3
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 2.1e-11 72.8 119 42.9
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 2.7e-11 72.4 110 40.0
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 4.6e-11 71.6 119 37.8
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 4.6e-11 71.6 103 43.7
COL.COLO4_04711 Corchorus olitorius HOM05D002974 ORTHO05D002992 3.0e-10 68.9 107 43.0
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 3.0e-10 68.9 125 40.0
PGR031G3974 Punica granatum HOM05D002974 ORTHO05D002992 3.9e-10 68.6 141 33.3
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 5.1e-10 68.2 122 39.3
Oeu029509.1 Olea europaea HOM05D002974 ORTHO05D002992 5.1e-10 68.2 124 37.9
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 8.7e-10 67.4 117 40.2
arahy.Tifrunner.gnm1.ann1.C03B5F Arachis hypogaea HOM05D002974 ORTHO05D002992 1.5e-09 66.6 143 37.1
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 4.3e-09 65.1 117 34.2
Gorai.007G352700 Gossypium raimondii HOM05D002974 ORTHO05D002992 4.3e-09 65.1 120 44.2
SHI49841 Sapria himalayana HOM05D048774 ORTHO05D002992 4.3e-09 65.1 98 44.9
SHI50452 Sapria himalayana HOM05D048774 ORTHO05D002992 4.3e-09 65.1 98 44.9
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 5.6e-09 64.7 129 36.4
Lj1g0016303 Lotus japonicus HOM05D002974 ORTHO05D002992 5.6e-09 64.7 112 42.0
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 7.4e-09 64.3 101 43.6
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 7.4e-09 64.3 101 43.6
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 1.3e-08 63.5 116 36.2
Rhsim10G0015600 Rhododendron simsii HOM05D001812 ORTHO05D001874 1.3e-08 63.5 72 52.8
Gohir.A11G307100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.6e-08 63.2 120 44.2
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 1.6e-08 63.2 135 39.3
Ca_08391_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 2.1e-08 62.8 107 42.1
Medtr7g089860 Medicago truncatula HOM05D002974 ORTHO05D002992 2.1e-08 62.8 110 41.8
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 3.7e-08 62.0 128 35.2
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 6.2e-08 61.2 121 36.4
CsaV3_4G029660 Cucumis sativus L. HOM05D002974 ORTHO05D002992 6.2e-08 61.2 120 40.0
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 6.2e-08 61.2 103 43.7
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.1e-07 60.5 103 43.7
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.1e-07 60.5 103 43.7
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 1.1e-07 60.5 110 37.3
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 1.4e-07 60.1 129 38.8
Cpa.g.sc5.168 Carica papaya HOM05D002974 ORTHO05D002992 1.8e-07 59.7 143 37.1
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 2.4e-07 59.3 134 36.6
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 3.1e-07 58.9 111 41.4
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 3.1e-07 58.9 112 41.1
Sed0014788 Sechium edule HOM05D002974 ORTHO05D002992 3.1e-07 58.9 101 39.6
ClCG04G004500 Citrullus lanatus HOM05D002974 ORTHO05D002992 5.3e-07 58.2 119 37.8
MELO3C019076.2 Cucumis melo HOM05D002974 ORTHO05D002992 5.3e-07 58.2 118 35.6
Gohir.D11G322600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 5.3e-07 58.2 117 41.9
SalBow6G5116 Salvia bowleyana HOM05D002974 ORTHO05D002992 5.3e-07 58.2 116 37.1
MELO3C009755.2 Cucumis melo HOM05D002974 ORTHO05D002992 6.9e-07 57.8 96 38.5
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 6.9e-07 57.8 116 39.7
Nitab4.5_0000812g0090 Nicotiana tabacum HOM05D015198 ORTHO05D002992 9.0e-07 57.4 113 39.8
Psat3g078800 Pisum sativum HOM05D002974 ORTHO05D002992 9.0e-07 57.4 111 38.7
ClCG10G016220 Citrullus lanatus HOM05D002974 ORTHO05D002992 1.5e-06 56.6 94 35.1
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 1.5e-06 56.6 104 36.5
PSO339G5722 Papaver somniferum HOM05D002974 ORTHO05D002992 3.4e-06 55.5 136 35.3
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 4.5e-06 55.1 132 34.8
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 5.8e-06 54.7 130 33.1
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 5.8e-06 54.7 139 32.4
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.0e-05 53.9 111 35.1


User provided reference genes

Program Settings