Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv06171 Davidia involucrata HOM05D007690 ORTHO05D009685 0.0e+00 1252.7 601 100.0
Dinv06191 Davidia involucrata HOM05D007690 ORTHO05D009685 0.0e+00 1239.2 593 100.0
Hma1.2p1_0548F.1_g176720 Hydrangea macrophylla HOM05D007690 ORTHO05D009685 5.5e-291 1003.8 593 79.6
CSS0001684 Camellia sinensis var. sinensis HOM05D007690 ORTHO05D009685 7.5e-288 993.4 593 79.4
Lj1C1090T5 Lonicera japonica HOM05D007690 ORTHO05D009685 5.3e-286 987.3 593 78.4
Actinidia01830 Actinidia chinensis HOM05D007690 ORTHO05D009685 2.7e-285 984.9 593 78.9
Cfa020001 Carpinus fangiana HOM05D007690 ORTHO05D009685 1.6e-274 949.1 593 76.2
Actinidia17955 Actinidia chinensis HOM05D007690 ORTHO05D009685 1.4e-273 946.0 593 77.1
Rhsim03G0038800 Rhododendron simsii HOM05D007690 ORTHO05D009685 2.5e-267 925.2 591 74.8
Prupe.7G033900 Prunus persica HOM05D007690 ORTHO05D009685 4.0e-265 917.9 593 73.7
Potri.006G039500 Populus trichocarpa HOM05D007690 ORTHO05D009685 6.4e-263 910.6 594 72.1
QL07p011032 Quercus lobata HOM05D007690 ORTHO05D009685 1.1e-262 909.8 593 73.5
CiPaw.10G040400 Carya illinoinensis HOM05D007690 ORTHO05D009685 2.7e-261 905.2 593 72.3
Manes.08G060600 Manihot esculenta HOM05D007690 ORTHO05D009685 5.9e-261 904.0 595 72.6
CiPaw.09G048300 Carya illinoinensis HOM05D007690 ORTHO05D009685 5.6e-259 897.5 593 71.7
GSVIVG01033641001 Vitis vinifera HOM05D007690 ORTHO05D009685 2.1e-258 895.6 593 72.8
vmacro07787 Vaccinium macrocarpon HOM05D007690 ORTHO05D009685 2.8e-258 895.2 646 68.4
SabraUnG0002200 Salix brachista HOM05D007690 ORTHO05D009685 1.0e-257 893.3 593 70.5
Peaxi162Scf00076g00414 Petunia axillaris HOM05D007690 ORTHO05D009685 1.2e-256 889.8 595 70.6
ClCG04G005610 Citrullus lanatus HOM05D007690 ORTHO05D009685 7.0e-254 880.6 599 71.0
Thecc.05G129100 Theobroma cacao HOM05D007690 ORTHO05D009685 2.7e-253 878.6 600 70.8
TWI53G1776 Tripterygium wilfordii HOM05D007690 ORTHO05D009685 3.5e-253 878.2 593 69.8
Atru.chr1.1432 Acer truncatum HOM05D007690 ORTHO05D009685 6.0e-253 877.5 598 71.2
Oeu059361.1 Olea europaea HOM05D007690 ORTHO05D009685 1.0e-252 876.7 593 69.6
Sabra06G0026600 Salix brachista HOM05D007690 ORTHO05D009685 3.9e-252 874.8 628 66.7
Nitab4.5_0000470g0050 Nicotiana tabacum HOM05D007690 ORTHO05D009685 5.6e-251 870.9 596 69.8
Nitab4.5_0005001g0030 Nicotiana tabacum HOM05D007690 ORTHO05D009685 1.2e-250 869.8 594 69.9
Sed0012923 Sechium edule HOM05D007690 ORTHO05D009685 1.6e-250 869.4 604 70.2
Duzib093G0724 Durio zibethinus HOM05D007690 ORTHO05D009685 2.3e-249 865.5 600 69.7
Cc06_g19420 Coffea canephora HOM05D007690 ORTHO05D009685 6.8e-249 864.0 599 69.9
Eucgr.A02235 Eucalyptus grandis HOM05D007690 ORTHO05D009685 6.8e-249 864.0 596 67.8
CsaV3_4G029540 Cucumis sativus L. HOM05D007690 ORTHO05D009685 9.8e-248 860.1 599 70.1
PGR031G0865 Punica granatum HOM05D007690 ORTHO05D009685 2.9e-247 858.6 593 70.7
MSTRG.6368 Avicennia marina HOM05D007690 ORTHO05D009685 4.9e-247 857.8 596 68.5
Gorai.013G001500 Gossypium raimondii HOM05D007690 ORTHO05D009685 1.9e-246 855.9 601 69.9
Gohir.D13G001600 Gossypium hirsutum HOM05D007690 ORTHO05D009685 3.2e-246 855.1 601 70.0
Nn8g41087 Nelumbo nucifera HOM05D007690 ORTHO05D009685 1.6e-245 852.8 597 68.5
MD14G1090500 Malus domestica HOM05D007690 ORTHO05D009685 7.8e-245 850.5 599 68.3
Hund19090 Selenicereus undatus HOM05D007690 ORTHO05D009685 1.0e-244 850.1 603 67.7
Glyma.03G127200 Glycine max HOM05D007690 ORTHO05D009685 3.3e-243 845.1 600 68.2
Lsat_1_v5_gn_5_157261 Lactuca sativa HOM05D007690 ORTHO05D009685 8.1e-242 840.5 595 68.1
CANSAT64G2689 Cannabis sativa HOM05D007690 ORTHO05D009685 1.4e-241 839.7 598 68.2
Solyc03g094020.3 Solanum lycopersicum HOM05D007690 ORTHO05D009685 6.8e-241 837.4 593 67.8
PGSC0003DMG400008345 Solanum tuberosum HOM05D007690 ORTHO05D009685 6.8e-241 837.4 593 68.1
Sopen03g024910 Solanum pennellii HOM05D007690 ORTHO05D009685 8.9e-241 837.0 593 68.3
VMungo1383G0528 Vigna mungo HOM05D007690 ORTHO05D009685 1.5e-240 836.3 604 66.7
MELO3C019091.2 Cucumis melo HOM05D007690 ORTHO05D009685 2.0e-240 835.9 649 64.9
Phvul.001G123000 Phaseolus vulgaris HOM05D007690 ORTHO05D009685 2.6e-240 835.5 601 66.6
RcHm_v2.0_Chr2g0125791 Rosa chinensis HOM05D007690 ORTHO05D009685 7.6e-240 833.9 594 67.2
DCAR_020576 Daucus carota HOM05D007690 ORTHO05D009685 4.9e-239 831.2 593 68.5
Nn7g36803 Nelumbo nucifera HOM05D007690 ORTHO05D009685 1.1e-238 830.1 598 66.1
CAN.G297.10 Capsicum annuum HOM05D007690 ORTHO05D009685 1.6e-237 826.2 595 66.6
SalBow6G4309 Salvia bowleyana HOM05D007690 ORTHO05D009685 2.1e-237 825.9 593 67.1
Lalb_Chr14g0365781 Lupinus albus HOM05D007690 ORTHO05D009685 1.7e-236 822.8 596 67.3
Ciclev10004303m.g Citrus clementina HOM05D007690 ORTHO05D009685 5.1e-236 821.2 601 66.2
Lj1g0005796 Lotus japonicus HOM05D007690 ORTHO05D009685 6.6e-236 820.8 602 66.3
arahy.Tifrunner.gnm1.ann1.L6USB4 Arachis hypogaea HOM05D007690 ORTHO05D009685 8.6e-236 820.5 613 66.2
Migut.J01648 Erythranthe guttata HOM05D007690 ORTHO05D009685 1.1e-235 820.1 599 66.6
Medtr7g089780 Medicago truncatula HOM05D007690 ORTHO05D009685 1.9e-235 819.3 596 65.6
HanXRQChr01g0008191 Helianthus annuus HOM05D007690 ORTHO05D009685 2.5e-235 818.9 595 67.6
arahy.Tifrunner.gnm1.ann1.AJ9HGA Arachis hypogaea HOM05D007690 ORTHO05D009685 4.0e-233 811.6 613 65.9
Psat3g079120 Pisum sativum HOM05D007690 ORTHO05D009685 5.2e-233 811.2 594 65.2
Ah.13g076840 Amaranthus hybridus HOM05D007690 ORTHO05D009685 8.9e-233 810.4 601 65.2
Ca_08388_v3 Cicer arietinum L. HOM05D007690 ORTHO05D009685 8.9e-233 810.4 602 66.3
SGA_v2.0_scaffold66G22254 Striga asiatica HOM05D007690 ORTHO05D009685 3.3e-227 792.0 594 64.8
SGA_v2.0_scaffold105G30282 Striga asiatica HOM05D007690 ORTHO05D009685 7.3e-227 790.8 594 64.8
Sc15g0003650 Simmondsia chinensis HOM05D007690 ORTHO05D009685 1.4e-225 786.6 594 63.1
EL10Ac3g07245 Beta vulgaris HOM05D007690 ORTHO05D009685 2.0e-224 782.7 598 65.4
Haze_20233 Corylus avellana HOM05D007690 ORTHO05D009685 1.3e-220 770.0 593 64.6
Lalb_Chr22g0357471 Lupinus albus HOM05D007690 ORTHO05D009685 1.1e-217 760.4 595 62.9
MBI13_g09226_MAGBIO Magnolia biondii HOM05D007690 ORTHO05D009685 1.4e-217 760.0 603 63.3
FAN02G0812 Fragaria x ananassa HOM05D007690 ORTHO05D009685 4.0e-217 758.4 593 63.7
FvH4_6g25360 Fragaria vesca HOM05D007690 ORTHO05D009685 1.2e-216 756.9 593 63.4
Cpa.g.sc5.162 Carica papaya HOM05D007690 ORTHO05D009685 2.6e-216 755.7 595 61.3
TPR.G34623 Trifolium pratense HOM05D007690 ORTHO05D009685 9.0e-209 730.7 549 63.8
Gohir.A13G002200 Gossypium hirsutum HOM05D007690 ORTHO05D009685 5.5e-206 721.5 601 62.4
COL.COLO4_21470 Corchorus olitorius HOM05D007690 ORTHO05D009685 1.6e-205 719.9 515 68.7
unitig_37.g12785 Utricularia gibba HOM05D007690 ORTHO05D009685 2.1e-202 709.5 593 59.4
CDE04G2124 Ceratophyllum demersum HOM05D007690 ORTHO05D009685 4.5e-200 701.8 599 56.9
ATR1096G016 Amborella trichopoda HOM05D007690 ORTHO05D009685 3.0e-196 689.1 615 57.1
Zm00001eb333050 Zea mays HOM05D007690 ORTHO05D009685 1.6e-165 587.0 626 50.3
AUR62018353 Chenopodium quinoa HOM05D007690 ORTHO05D009685 8.3e-162 574.7 507 58.0
Os01g0268600 Oryza sativa ssp. japonica HOM05D007690 ORTHO05D009685 5.5e-158 562.0 616 49.4
ECA248G1370 Erigeron canadensis HOM05D007690 ORTHO05D009685 3.3e-142 509.6 294 79.9
Mapoly0147s0026 Marchantia polymorpha HOM05D007690 ORTHO05D009685 1.1e-137 494.6 705 39.9
Pp3c5_4430 Physcomitrium patens HOM05D007690 ORTHO05D009685 2.1e-120 437.2 312 62.8
AUR62030309 Chenopodium quinoa HOM05D007690 ORTHO05D009685 1.1e-116 424.9 238 81.1
SMO356G0027 Selaginella moellendorffii HOM05D007690 ORTHO05D009685 8.4e-114 415.2 311 59.8
CBR_g21789 Chara braunii HOM05D007690 ORTHO05D009685 9.9e-107 391.7 703 34.4
HPP92_001695 Vanilla planifolia HOM05D007690 ORTHO05D009685 1.7e-82 311.2 355 47.0
HPP92_001694 Vanilla planifolia HOM05D007690 ORTHO05D009685 1.7e-69 268.1 165 70.9
MCO14G519 Micromonas commoda HOM05D007690 ORTHO05D009685 2.4e-68 264.2 320 42.8


User provided reference genes

Program Settings