Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05901 Davidia involucrata HOM05D014212 ORTHO05D000385 1.3e-41 173.3 140 100.0
PGSC0003DMG400015737 Solanum tuberosum HOM05D001309 ORTHO05D000385 8.4e-17 90.9 73 54.8
Solyc05g025720.1 Solanum lycopersicum HOM05D063743 ORTHO05D000385 1.5e-13 80.1 76 47.4
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 1.6e-12 76.6 76 50.0
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 8.2e-12 74.3 60 60.0
Lj9A299T35 Lonicera japonica HOM05D001309 ORTHO05D000385 1.1e-11 73.9 76 50.0
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 2.2e-09 66.2 73 52.1
CSS0013398 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.9e-09 65.9 68 48.5
CSS0023154 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.9e-09 65.9 70 45.7
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 2.9e-09 65.9 75 45.3
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.9e-09 65.9 69 46.4
CSS0030235 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.5e-09 64.7 70 44.3
CSS0000056 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-08 63.9 70 44.3
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-08 63.9 70 44.3
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-08 63.9 71 45.1
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-08 63.9 70 44.3
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-08 63.9 70 44.3
CANSAT11G1463 Cannabis sativa HOM05D001309 ORTHO05D000385 1.1e-08 63.9 69 39.1
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 1.1e-08 63.9 69 39.1
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 1.1e-08 63.9 76 47.4
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-08 63.5 70 48.6
CSS0024121 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 2.5e-08 62.8 67 49.3
CSS0038787 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 2.5e-08 62.8 67 49.3
CSS0044513 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 2.5e-08 62.8 67 49.3
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.5e-08 62.8 65 50.8
CSS0044099 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 3.2e-08 62.4 67 49.3
PGSC0003DMG400004327 Solanum tuberosum HOM05D001309 ORTHO05D000385 4.2e-08 62.0 55 52.7
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 5.5e-08 61.6 69 40.6
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 5.5e-08 61.6 65 49.2
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 5.5e-08 61.6 65 49.2
vmacro07151 Vaccinium macrocarpon HOM05D014212 ORTHO05D000385 5.5e-08 61.6 62 41.9
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.2e-08 61.2 77 40.3
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 1.2e-07 60.5 71 47.9
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-07 60.5 64 45.3
CSS0019964 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-07 60.5 70 42.9
CSS0027143 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-07 60.5 64 45.3
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 1.2e-07 60.5 65 41.5
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-07 60.5 70 44.3
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-07 60.1 77 41.6
CSS0005612 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 2.1e-07 59.7 67 47.8
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.1e-07 59.7 65 47.7
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 3.6e-07 58.9 72 44.4
CSS0037564 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 3.6e-07 58.9 67 46.3
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 3.6e-07 58.9 67 49.3
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.6e-07 58.5 70 42.9
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 4.6e-07 58.5 74 44.6
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 6.1e-07 58.2 75 45.3
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 6.1e-07 58.2 70 42.9
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 7.9e-07 57.8 71 45.1
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.0e-06 57.4 69 40.6
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 1.8e-06 56.6 73 45.2
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 1.8e-06 56.6 72 41.7
COL.COLO4_24303 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.3e-06 56.2 70 44.3
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 2.3e-06 56.2 71 43.7
Rhsim03G0111100 Rhododendron simsii HOM05D003586 ORTHO05D004036 2.3e-06 56.2 65 36.9
vmacro00660 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 2.3e-06 56.2 59 49.2
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.0e-06 55.8 74 43.2
Dinv04171 Davidia involucrata HOM05D010146 ORTHO05D000385 3.0e-06 55.8 66 40.9
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 3.0e-06 55.8 72 43.1
CSS0006313 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 3.9e-06 55.5 67 46.3
CSS0013167 Camellia sinensis var. sinensis HOM05D014212 ORTHO05D000385 3.9e-06 55.5 67 46.3
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 3.9e-06 55.5 72 44.4
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 3.9e-06 55.5 66 39.4
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 3.9e-06 55.5 73 45.2
Thecc.02G018900 Theobroma cacao HOM05D005763 ORTHO05D005970 3.9e-06 55.5 72 41.7
Gohir.A12G105966 Gossypium hirsutum HOM05D040140 ORTHO05D000385 5.1e-06 55.1 65 43.1
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.1e-06 55.1 69 42.0
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.7e-06 54.7 73 43.8
Cpa.g.c35072.1 Carica papaya HOM05D001309 ORTHO05D000385 6.7e-06 54.7 71 43.7
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 6.7e-06 54.7 71 42.3
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 6.7e-06 54.7 70 41.4
Nn3g21442 Nelumbo nucifera HOM05D001309 ORTHO05D000385 6.7e-06 54.7 69 40.6
ECA240G1654 Erigeron canadensis HOM05D005763 ORTHO05D005970 8.7e-06 54.3 51 51.0
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 8.7e-06 54.3 76 40.8


User provided reference genes

Program Settings