Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 1.0e-111 406.8 202 100.0
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 5.0e-87 324.7 191 81.7
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 5.0e-87 324.7 190 84.2
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.9e-86 322.8 190 83.7
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 1.9e-86 322.8 190 82.6
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 4.0e-84 315.1 193 77.7
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 1.5e-83 313.2 189 79.4
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 2.0e-83 312.8 190 80.5
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 4.4e-83 311.6 190 78.9
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 3.1e-81 305.4 189 77.2
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 7.0e-81 304.3 190 78.9
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 7.0e-81 304.3 190 76.8
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 1.2e-80 303.5 190 77.9
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 3.5e-80 302.0 190 75.3
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 7.7e-80 300.8 190 74.7
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 7.7e-80 300.8 190 74.7
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 1.0e-79 300.4 190 77.4
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.0e-79 300.4 190 76.8
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 1.3e-79 300.1 190 74.2
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 3.8e-79 298.5 190 76.8
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 8.6e-79 297.4 195 72.8
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.5e-78 296.6 197 72.6
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 1.5e-78 296.6 188 76.6
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 2.5e-78 295.8 190 74.2
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 4.2e-78 295.0 189 75.1
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 1.2e-77 293.5 187 77.5
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.2e-77 293.5 190 75.3
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 1.6e-77 293.1 190 74.2
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 2.8e-77 292.4 188 76.6
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 4.7e-77 291.6 190 73.7
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 4.7e-77 291.6 190 73.7
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 4.7e-77 291.6 186 74.7
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 4.7e-77 291.6 190 73.2
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 4.7e-77 291.6 184 78.3
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 6.1e-77 291.2 192 75.0
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 6.1e-77 291.2 188 74.5
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 6.1e-77 291.2 188 74.5
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 6.1e-77 291.2 180 78.9
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 1.4e-76 290.0 190 73.7
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 2.3e-76 289.3 189 75.1
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 1.2e-75 287.0 187 72.7
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 2.0e-75 286.2 169 82.2
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 9.8e-75 283.9 171 78.4
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 1.3e-74 283.5 192 73.4
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.7e-74 283.1 187 73.3
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 2.8e-74 282.3 187 72.2
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 4.9e-74 281.6 190 72.6
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 6.3e-74 281.2 186 72.0
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 8.3e-74 280.8 193 72.5
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 1.4e-73 280.0 194 69.1
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.4e-73 280.0 188 70.2
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 5.4e-73 278.1 189 71.4
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 2.7e-72 275.8 176 74.4
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 5.9e-72 274.6 188 71.3
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.0e-71 273.9 182 71.4
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 2.3e-71 272.7 188 69.1
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 2.3e-71 272.7 188 68.6
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 8.6e-71 270.8 164 82.9
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.1e-70 270.4 177 71.8
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 1.9e-70 269.6 189 67.2
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.9e-70 269.6 184 67.9
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 1.9e-70 269.6 187 69.0
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 2.5e-70 269.2 187 70.1
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 5.6e-70 268.1 187 68.4
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 7.3e-70 267.7 188 68.1
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 9.5e-70 267.3 143 88.8
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.6e-69 266.5 188 67.6
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 4.7e-69 265.0 188 68.1
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.0e-68 263.8 188 70.2
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.4e-68 263.5 187 71.7
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 1.2e-67 260.4 154 81.2
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 2.0e-67 259.6 187 70.1
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 6.4e-66 254.6 262 55.0
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.9e-65 253.1 251 54.6
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 3.5e-64 248.8 150 80.7
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 7.8e-64 247.7 174 68.4
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 1.1e-62 243.8 169 71.6
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 8.0e-61 237.7 194 63.9
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 4.0e-60 235.3 190 63.2
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 2.0e-59 233.0 338 41.7
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 4.9e-58 228.4 168 67.9
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 3.2e-57 225.7 150 68.7
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 5.4e-57 224.9 308 42.5
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 5.4e-57 224.9 308 42.5
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 6.8e-52 208.0 171 57.9
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 1.6e-48 196.8 144 70.1
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 2.1e-48 196.4 169 54.4
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 4.6e-48 195.3 130 72.3
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 5.1e-47 191.8 188 54.3
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 1.2e-45 187.2 191 52.9
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 2.8e-45 186.0 131 68.7
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 4.7e-45 185.3 110 77.3
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 9.9e-43 177.6 133 64.7
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 1.4e-41 173.7 121 68.6
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 2.5e-38 162.9 228 48.7
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 9.6e-38 161.0 171 50.3
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 2.3e-31 139.8 286 30.4
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.3e-29 134.0 87 75.9
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 6.2e-29 131.7 110 60.0
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 2.4e-28 129.8 82 69.5
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 1.9e-25 120.2 79 75.9
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 1.9e-17 93.6 129 41.9
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 9.3e-17 91.3 74 58.1
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 1.0e-15 87.8 55 76.4
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 3.9e-15 85.9 164 34.8
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 3.3e-14 82.8 107 46.7
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 1.5e-11 73.9 49 73.5
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 1.3e-10 70.9 94 42.6
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.1e-08 63.5 41 70.7
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.0e-07 61.2 34 82.4


User provided reference genes

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