Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05702 Davidia involucrata HOM05D007422 ORTHO05D009333 5.3e-31 137.1 72 100.0
GSVIVG01026559001 Vitis vinifera HOM05D007422 ORTHO05D009333 2.1e-24 115.2 69 87.0
Dinv18494 Davidia involucrata HOM05D007422 ORTHO05D009333 3.7e-24 114.4 69 88.4
vmacro18659 Vaccinium macrocarpon HOM05D007422 ORTHO05D009333 1.1e-23 112.8 66 87.9
Prupe.6G165000 Prunus persica HOM05D007422 ORTHO05D009333 1.8e-23 112.1 67 86.6
COL.COLO4_21895 Corchorus olitorius HOM05D007422 ORTHO05D009333 2.4e-23 111.7 67 85.1
QL06p030244 Quercus lobata HOM05D007422 ORTHO05D009333 3.1e-23 111.3 67 85.1
Manes.12G151400 Manihot esculenta HOM05D007422 ORTHO05D009333 4.0e-23 110.9 69 82.6
Manes.12G151600 Manihot esculenta HOM05D007422 ORTHO05D009333 4.0e-23 110.9 69 82.6
Duzib264G1170 Durio zibethinus HOM05D007422 ORTHO05D009333 9.0e-23 109.8 66 84.8
Thecc.01G123800 Theobroma cacao HOM05D007422 ORTHO05D009333 9.0e-23 109.8 66 84.8
Cfa002851 Carpinus fangiana HOM05D007422 ORTHO05D009333 1.2e-22 109.4 66 83.3
Potri.005G056500 Populus trichocarpa HOM05D007422 ORTHO05D009333 1.2e-22 109.4 66 84.8
TAR628G0864 Trochodendron aralioides HOM05D007422 ORTHO05D009333 1.2e-22 109.4 68 83.8
MSTRG.2680 Avicennia marina HOM05D007422 ORTHO05D009333 1.5e-22 109.0 69 81.2
CiPaw.04G085200 Carya illinoinensis HOM05D007422 ORTHO05D009333 2.0e-22 108.6 66 83.3
Glyma.06G150900 Glycine max HOM05D007422 ORTHO05D009333 2.6e-22 108.2 69 81.2
Gohir.D04G029700 Gossypium hirsutum HOM05D007422 ORTHO05D009333 2.6e-22 108.2 66 81.8
Gorai.012G032800 Gossypium raimondii HOM05D007422 ORTHO05D009333 2.6e-22 108.2 66 81.8
CANSAT01G0526 Cannabis sativa HOM05D007422 ORTHO05D009333 3.4e-22 107.8 69 79.7
Cc07_g17580 Coffea canephora HOM05D007422 ORTHO05D009333 3.4e-22 107.8 69 81.2
RcHm_v2.0_Chr2g0118261 Rosa chinensis HOM05D007422 ORTHO05D009333 3.4e-22 107.8 66 84.8
Sabra05G0048800 Salix brachista HOM05D007422 ORTHO05D009333 5.8e-22 107.1 65 83.1
Peaxi162Scf00583g00227 Petunia axillaris HOM05D007422 ORTHO05D009333 7.6e-22 106.7 69 73.9
CAN.G900.53 Capsicum annuum HOM05D007422 ORTHO05D009333 1.7e-21 105.5 69 76.8
Migut.H01100 Erythranthe guttata HOM05D007422 ORTHO05D009333 2.2e-21 105.1 63 82.5
Glyma.04G215300 Glycine max HOM05D007422 ORTHO05D009333 2.2e-21 105.1 69 79.7
Lj1g0018544 Lotus japonicus HOM05D007422 ORTHO05D009333 2.9e-21 104.8 66 81.8
Aqoxy5G02143 Aquilegia oxysepala HOM05D007422 ORTHO05D009333 3.8e-21 104.4 69 75.4
Gohir.A05G386900 Gossypium hirsutum HOM05D007422 ORTHO05D009333 3.8e-21 104.4 66 78.8
Nn1g06132 Nelumbo nucifera HOM05D007422 ORTHO05D009333 3.8e-21 104.4 68 76.5
TPR.G18719 Trifolium pratense HOM05D007422 ORTHO05D009333 3.8e-21 104.4 66 81.8
arahy.Tifrunner.gnm1.ann1.DL1AJH Arachis hypogaea HOM05D007422 ORTHO05D009333 5.0e-21 104.0 69 79.7
Ca_16922_v3 Cicer arietinum L. HOM05D007422 ORTHO05D009333 5.0e-21 104.0 66 80.3
MD05G1015900 Malus domestica HOM05D007422 ORTHO05D009333 5.0e-21 104.0 67 77.6
PGSC0003DMG400018421 Solanum tuberosum HOM05D007422 ORTHO05D009333 5.0e-21 104.0 69 75.4
Atru.chr4.503 Acer truncatum HOM05D007422 ORTHO05D009333 6.5e-21 103.6 67 77.6
Medtr3g095670 Medicago truncatula HOM05D007422 ORTHO05D009333 6.5e-21 103.6 66 81.8
VMungo1309G2444 Vigna mungo HOM05D007422 ORTHO05D009333 6.5e-21 103.6 66 80.3
EL10Ac6g15266 Beta vulgaris HOM05D007422 ORTHO05D009333 8.4e-21 103.2 67 76.1
Nitab4.5_0006443g0040 Nicotiana tabacum HOM05D007422 ORTHO05D009333 8.4e-21 103.2 69 76.8
Oeu039761.1 Olea europaea HOM05D007422 ORTHO05D009333 8.4e-21 103.2 69 78.3
arahy.Tifrunner.gnm1.ann1.PIK6SY Arachis hypogaea HOM05D007422 ORTHO05D009333 1.1e-20 102.8 69 78.3
DCAR_031485 Daucus carota HOM05D007422 ORTHO05D009333 1.1e-20 102.8 69 78.3
TWI31G1366 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 1.1e-20 102.8 69 72.5
Aa31LG10G5060 Aethionema arabicum HOM05D007422 ORTHO05D009333 1.4e-20 102.4 66 75.8
MELO3C023262.2 Cucumis melo HOM05D007422 ORTHO05D009333 1.4e-20 102.4 63 84.1
Eucgr.H04923 Eucalyptus grandis HOM05D007422 ORTHO05D009333 1.4e-20 102.4 66 78.8
Solyc03g078350.3 Solanum lycopersicum HOM05D007422 ORTHO05D009333 1.4e-20 102.4 69 73.9
Sopen03g021130 Solanum pennellii HOM05D007422 ORTHO05D009333 1.4e-20 102.4 69 73.9
AT1G49170 Arabidopsis thaliana HOM05D007422 ORTHO05D009333 1.9e-20 102.1 66 77.3
CARHR039170 Cardamine hirsuta HOM05D007422 ORTHO05D009333 1.9e-20 102.1 66 77.3
AL1G56040 Arabidopsis lyrata HOM05D007422 ORTHO05D009333 2.5e-20 101.7 66 77.3
PSO170G3514 Papaver somniferum HOM05D007422 ORTHO05D009333 2.5e-20 101.7 66 75.8
Psat5g063240 Pisum sativum HOM05D007422 ORTHO05D009333 2.5e-20 101.7 66 80.3
CsaV3_2G018110 Cucumis sativus L. HOM05D007422 ORTHO05D009333 3.2e-20 101.3 63 82.5
Phvul.009G147900 Phaseolus vulgaris HOM05D007422 ORTHO05D009333 3.2e-20 101.3 66 78.8
TWI75G1659 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 3.2e-20 101.3 69 73.9
Thhalv10011860m.g Eutrema salsugineum HOM05D007422 ORTHO05D009333 5.5e-20 100.5 66 77.3
Lalb_Chr08g0238531 Lupinus albus HOM05D007422 ORTHO05D009333 5.5e-20 100.5 66 78.8
Carub.0001s3836 Capsella rubella HOM05D007422 ORTHO05D009333 7.1e-20 100.1 66 75.8
Cpa.g.sc42.105 Carica papaya HOM05D007422 ORTHO05D009333 7.1e-20 100.1 66 74.2
PSO017G6029 Papaver somniferum HOM05D007422 ORTHO05D009333 7.1e-20 100.1 66 74.2
Sp1g36060 Schrenkiella parvula HOM05D007422 ORTHO05D009333 7.1e-20 100.1 66 75.8
THA.LOC104821861 Tarenaya hassleriana HOM05D007422 ORTHO05D009333 7.1e-20 100.1 66 75.8
Hund04464 Selenicereus undatus HOM05D007422 ORTHO05D009333 9.3e-20 99.8 65 75.4
CDE06G1708 Ceratophyllum demersum HOM05D007422 ORTHO05D009333 1.2e-19 99.4 69 71.0
PGR102G2924 Punica granatum HOM05D007422 ORTHO05D009333 1.2e-19 99.4 66 74.2
Ah.02g122030 Amaranthus hybridus HOM05D007422 ORTHO05D009333 2.1e-19 98.6 67 73.1
A05p20740 Brassica napus HOM05D007422 ORTHO05D009333 2.1e-19 98.6 66 74.2
BolC5t32228H Brassica oleracea HOM05D007422 ORTHO05D009333 2.1e-19 98.6 66 74.2
BraA05t20982Z Brassica rapa HOM05D007422 ORTHO05D009333 2.1e-19 98.6 66 74.2
Ciclev10026766m.g Citrus clementina HOM05D007422 ORTHO05D009333 2.1e-19 98.6 67 74.6
HanXRQChr17g0559811 Helianthus annuus HOM05D007422 ORTHO05D009333 2.1e-19 98.6 64 75.0
CDE08G0547 Ceratophyllum demersum HOM05D007422 ORTHO05D009333 3.5e-19 97.8 66 74.2
unitig_60.g25621 Utricularia gibba HOM05D007422 ORTHO05D009333 3.5e-19 97.8 69 72.5
BcaC05g27531 Brassica carinata HOM05D007422 ORTHO05D009333 7.9e-19 96.7 66 72.7
C05p35090 Brassica napus HOM05D007422 ORTHO05D009333 7.9e-19 96.7 66 72.7
Lsat_1_v5_gn_8_142161 Lactuca sativa HOM05D007422 ORTHO05D009333 1.0e-18 96.3 62 75.8
MBI17_g11164_MAGBIO Magnolia biondii HOM05D007422 ORTHO05D009333 1.0e-18 96.3 63 77.8
SGA_v2.0_scaffold137G35131 Striga asiatica HOM05D007422 ORTHO05D009333 1.3e-18 95.9 63 77.8
Os04g0686300 Oryza sativa ssp. japonica HOM05D007422 ORTHO05D009333 8.7e-18 93.2 67 67.2
HPP92_006817 Vanilla planifolia HOM05D007422 ORTHO05D009333 2.5e-17 91.7 62 69.4
ATR0772G041 Amborella trichopoda HOM05D007422 ORTHO05D009333 7.4e-17 90.1 69 63.8
Sc03g0005110 Simmondsia chinensis HOM05D007422 ORTHO05D009333 7.4e-17 90.1 83 61.4
Zm00001eb076010 Zea mays HOM05D007422 ORTHO05D009333 9.7e-17 89.7 63 66.7
SEGI_34968 Sequoiadendron giganteum HOM05D007422 ORTHO05D009333 1.3e-16 89.4 63 68.3
ECA233G2273 Erigeron canadensis HOM05D002719 ORTHO05D002938 1.5e-14 82.4 46 89.1
Prupe.6G164500 Prunus persica HOM05D007422 ORTHO05D009333 2.5e-12 75.1 67 62.7
Mapoly0054s0054 Marchantia polymorpha HOM05D007422 ORTHO05D009333 1.8e-10 68.9 60 50.0
BcaB02g11281 Brassica carinata HOM05D007422 ORTHO05D009333 3.0e-10 68.2 66 59.1
FvH4_1g23360 Fragaria vesca HOM05D007422 ORTHO05D009333 3.0e-10 68.2 66 57.6
FAN19G2306 Fragaria x ananassa HOM05D007422 ORTHO05D009333 1.1e-09 66.2 65 56.9
Sabra05G0049000 Salix brachista HOM05D007422 ORTHO05D009333 2.2e-08 62.0 69 53.6
RcHm_v2.0_Chr2g0118341 Rosa chinensis HOM05D007422 ORTHO05D009333 8.2e-08 60.1 41 75.6


User provided reference genes

Program Settings