Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05694 Davidia involucrata HOM05D034253 ORTHO05D029228 2.9e-148 528.5 260 100.0
QL07p010595 Quercus lobata HOM05D000023 ORTHO05D000014 1.4e-28 131.0 108 63.9
Dinv05197 Davidia involucrata HOM05D034253 ORTHO05D029228 2.3e-28 130.2 89 78.7
QL10p065955 Quercus lobata HOM05D000023 ORTHO05D000014 5.6e-22 109.0 161 39.8
QL03p022208 Quercus lobata HOM05D000023 ORTHO05D000014 2.1e-21 107.1 161 39.1
PSO067G0044 Papaver somniferum HOM05D000023 ORTHO05D000014 8.0e-21 105.1 127 44.1
PSO675G4560 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-20 102.8 164 37.2
PSO832G3933 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-20 102.8 164 37.2
PSO017G7056 Papaver somniferum HOM05D000023 ORTHO05D000014 5.2e-20 102.4 164 37.2
PSO765G0199 Papaver somniferum HOM05D000023 ORTHO05D000014 5.2e-20 102.4 164 37.2
PSO017G6863 Papaver somniferum HOM05D000023 ORTHO05D000014 6.8e-20 102.1 164 37.2
PSO339G4481 Papaver somniferum HOM05D000023 ORTHO05D000014 6.8e-20 102.1 164 37.2
PSO017G5774 Papaver somniferum HOM05D000023 ORTHO05D000014 8.9e-20 101.7 164 37.2
PSO541G3605 Papaver somniferum HOM05D000023 ORTHO05D000014 1.5e-19 100.9 164 37.2
PGR031G3431 Punica granatum HOM05D000023 ORTHO05D013319 1.5e-19 100.9 146 39.7
QL02p029416 Quercus lobata HOM05D000023 ORTHO05D000014 1.5e-19 100.9 161 37.3
QL10p060079 Quercus lobata HOM05D000023 ORTHO05D000014 1.5e-19 100.9 161 38.5
PSO415G0001 Papaver somniferum HOM05D000023 ORTHO05D000014 2.6e-19 100.1 164 36.6
PSO017G2031 Papaver somniferum HOM05D000023 ORTHO05D000014 3.4e-19 99.8 164 36.0
Dinv29976 Davidia involucrata HOM05D034253 ORTHO05D029228 5.8e-19 99.0 64 75.0
PSO081G0085 Papaver somniferum HOM05D000023 ORTHO05D000014 7.5e-19 98.6 164 37.2
QL10p062588 Quercus lobata HOM05D000023 ORTHO05D000014 2.2e-18 97.1 161 36.0
QL10p062902 Quercus lobata HOM05D000023 ORTHO05D000014 3.7e-18 96.3 161 36.0
QL10p062522 Quercus lobata HOM05D000023 ORTHO05D000014 4.9e-18 95.9 161 36.0
QL10p060195 Quercus lobata HOM05D000023 ORTHO05D000014 6.4e-18 95.5 161 36.0
PGR119G0670 Punica granatum HOM05D000046 ORTHO05D013319 1.4e-17 94.4 146 37.0
PGR102G0219 Punica granatum HOM05D000023 ORTHO05D013319 1.6e-16 90.9 146 37.7
PGR102G1530 Punica granatum HOM05D000577 ORTHO05D003509 1.6e-16 90.9 146 37.7
PGR119G1743 Punica granatum HOM05D000046 ORTHO05D013319 1.6e-16 90.9 146 36.3
Eucgr.E02343 Eucalyptus grandis HOM05D000306 ORTHO05D013319 3.5e-16 89.7 147 34.7
PGR119G1879 Punica granatum HOM05D000023 ORTHO05D013319 1.7e-15 87.4 148 35.1
PSO724G0215 Papaver somniferum HOM05D000023 ORTHO05D000014 6.6e-15 85.5 101 46.5
PGR119G2465 Punica granatum HOM05D000023 ORTHO05D013319 6.6e-15 85.5 148 34.5
Eucgr.E02624 Eucalyptus grandis HOM05D000023 ORTHO05D013832 8.6e-15 85.1 144 36.1
PGR031G1790 Punica granatum HOM05D000023 ORTHO05D013319 1.1e-14 84.7 170 35.9
Haze_02698 Corylus avellana HOM05D019317 ORTHO05D013832 1.5e-14 84.3 153 35.3
Eucgr.E02965 Eucalyptus grandis HOM05D000023 ORTHO05D013319 3.3e-14 83.2 149 35.6
PSO357G0552 Papaver somniferum HOM05D000023 ORTHO05D000014 3.3e-14 83.2 173 31.8
Eucgr.E02626 Eucalyptus grandis HOM05D000023 ORTHO05D000014 5.6e-14 82.4 146 36.3
Haze_02697 Corylus avellana HOM05D000023 ORTHO05D013832 2.8e-13 80.1 157 36.3
QL10p018200 Quercus lobata HOM05D000023 ORTHO05D029228 3.6e-13 79.7 50 72.0
PSO675G5511 Papaver somniferum HOM05D000023 ORTHO05D000014 4.7e-13 79.3 150 34.0
Haze_02700 Corylus avellana HOM05D000023 ORTHO05D013832 6.2e-13 79.0 154 33.8
Eucgr.E02336 Eucalyptus grandis HOM05D000023 ORTHO05D013319 4.0e-12 76.3 108 42.6
QL10p060493 Quercus lobata HOM05D000023 ORTHO05D000014 4.0e-12 76.3 50 66.0
Haze_02702 Corylus avellana HOM05D019317 ORTHO05D013832 2.9e-10 70.1 149 34.2
QL10p062015 Quercus lobata HOM05D000023 ORTHO05D000014 2.9e-10 70.1 50 62.0
Eucgr.H02626 Eucalyptus grandis HOM05D000306 ORTHO05D013319 4.1e-09 66.2 50 56.0
PSO675G4361 Papaver somniferum HOM05D000023 ORTHO05D000014 2.1e-08 63.9 116 32.8
QL04p050699 Quercus lobata HOM05D000023 ORTHO05D000014 6.0e-08 62.4 53 50.9
QL10p059399 Quercus lobata HOM05D000009 ORTHO05D000008 7.8e-08 62.0 55 54.5
QL10p062952 Quercus lobata HOM05D000009 ORTHO05D000008 3.9e-07 59.7 60 50.0
Sed0017071 Sechium edule HOM05D000023 ORTHO05D000014 5.0e-07 59.3 53 41.5
Prupe.2G058600 Prunus persica HOM05D000023 ORTHO05D000014 6.6e-07 58.9 49 49.0
QL10p062138 Quercus lobata HOM05D000003 ORTHO05D000004 6.6e-07 58.9 54 55.6
QL10p062985 Quercus lobata HOM05D000003 ORTHO05D000004 6.6e-07 58.9 54 55.6
MELO3C019933.2 Cucumis melo HOM05D000023 ORTHO05D000014 8.6e-07 58.5 49 44.9
QL10p043741 Quercus lobata HOM05D015373 ORTHO05D017888 1.1e-06 58.2 56 51.8
TWI38G0158 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.1e-06 58.2 53 43.4
Cpa.g.sc30.75 Carica papaya HOM05D018312 ORTHO05D013832 1.5e-06 57.8 50 56.0
QL10p047249 Quercus lobata HOM05D000009 ORTHO05D000008 1.5e-06 57.8 55 52.7
QL10p047264 Quercus lobata HOM05D000009 ORTHO05D000008 1.5e-06 57.8 55 52.7
arahy.Tifrunner.gnm1.ann1.Q6WAT8 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.9e-06 57.4 94 34.0
ClCG08G008630 Citrullus lanatus HOM05D000023 ORTHO05D000014 1.9e-06 57.4 53 41.5
CsaV3_6G004650 Cucumis sativus L. HOM05D000023 ORTHO05D000014 1.9e-06 57.4 53 41.5
Potri.018G137900 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.9e-06 57.4 57 50.9
Potri.018G145558 Populus trichocarpa HOM05D000101 ORTHO05D000089 1.9e-06 57.4 61 45.9
Potri.T046051 Populus trichocarpa HOM05D000101 ORTHO05D026078 1.9e-06 57.4 57 50.9
PGR142G0116 Punica granatum HOM05D015373 ORTHO05D017888 1.9e-06 57.4 43 62.8
QL10p066115 Quercus lobata HOM05D006297 ORTHO05D017888 1.9e-06 57.4 56 53.6
QL10p066259 Quercus lobata HOM05D000009 ORTHO05D000008 1.9e-06 57.4 56 50.0
CSS0007228 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-06 57.0 45 53.3
CSS0046865 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D008955 2.5e-06 57.0 45 53.3
Cpa.g.sc30.76 Carica papaya HOM05D018312 ORTHO05D013832 2.5e-06 57.0 50 54.0
Lalb_Chr25g0282821 Lupinus albus HOM05D000023 ORTHO05D000014 2.5e-06 57.0 49 46.9
Manes.11G132250 Manihot esculenta HOM05D000023 ORTHO05D000014 2.5e-06 57.0 47 53.2
QL10p065989 Quercus lobata HOM05D000009 ORTHO05D000008 2.5e-06 57.0 60 50.0
TAR480G0001 Trochodendron aralioides HOM05D000023 ORTHO05D000014 2.5e-06 57.0 49 49.0
Aa31LG8G250 Aethionema arabicum HOM05D000023 ORTHO05D000014 3.3e-06 56.6 130 31.5
Oeu054528.1 Olea europaea HOM05D000023 ORTHO05D000014 3.3e-06 56.6 49 44.9
Potri.019G013140 Populus trichocarpa HOM05D000101 ORTHO05D000089 3.3e-06 56.6 57 50.9
QL10p060986 Quercus lobata HOM05D000009 ORTHO05D000008 3.3e-06 56.6 57 49.1
SEGI_26844 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.3e-06 56.6 61 44.3
Oeu039300.1 Olea europaea HOM05D000023 ORTHO05D000014 4.3e-06 56.2 49 42.9
Potri.019G020102 Populus trichocarpa HOM05D000101 ORTHO05D000089 4.3e-06 56.2 57 52.6
SEGI_06102 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.6e-06 55.8 54 46.3
SEGI_19425 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.6e-06 55.8 54 46.3
Potri.019G020500 Populus trichocarpa HOM05D000101 ORTHO05D000089 7.3e-06 55.5 52 57.7
Potri.T044600 Populus trichocarpa HOM05D000101 ORTHO05D000089 9.5e-06 55.1 61 44.3


User provided reference genes

Program Settings