Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05655 Davidia involucrata HOM05D004432 ORTHO05D005427 4.8e-168 594.7 373 100.0
Dinv31191 Davidia involucrata HOM05D004432 ORTHO05D005427 1.4e-146 523.5 373 79.1
Hma1.2p1_0088F.1_g045180 Hydrangea macrophylla HOM05D004432 ORTHO05D005427 2.5e-132 476.1 376 76.3
CSS0030674 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 4.2e-132 475.3 376 76.3
Thecc.02G004200 Theobroma cacao HOM05D004432 ORTHO05D005427 5.9e-126 454.9 376 65.2
COL.COLO4_18029 Corchorus olitorius HOM05D004432 ORTHO05D003521 2.3e-125 453.0 365 66.0
Atru.chr10.352 Acer truncatum HOM05D004432 ORTHO05D005427 5.5e-124 448.4 374 63.4
Gohir.D12G047900 Gossypium hirsutum HOM05D004432 ORTHO05D005427 5.7e-121 438.3 374 66.0
GSVIVG01012145001 Vitis vinifera HOM05D004432 ORTHO05D005427 7.5e-121 438.0 377 67.4
MBI18_g00544_MAGBIO Magnolia biondii HOM05D004432 ORTHO05D005427 9.8e-121 437.6 379 68.9
MD05G1247000 Malus domestica HOM05D004432 ORTHO05D005427 1.7e-120 436.8 377 63.7
Lj1A1149G74 Lonicera japonica HOM05D004432 ORTHO05D005427 2.2e-120 436.4 423 60.0
Gohir.A12G049500 Gossypium hirsutum HOM05D004432 ORTHO05D005427 3.7e-120 435.6 374 66.3
Manes.03G075400 Manihot esculenta HOM05D004432 ORTHO05D005427 4.9e-120 435.3 377 71.4
TPR.G12851 Trifolium pratense HOM05D004432 ORTHO05D005427 6.3e-120 434.9 380 69.2
SalBow8G1652 Salvia bowleyana HOM05D004432 ORTHO05D005427 4.1e-119 432.2 378 65.9
FAN16G2829 Fragaria x ananassa HOM05D004432 ORTHO05D005427 2.0e-118 429.9 377 62.9
PGSC0003DMG401017733 Solanum tuberosum HOM05D004432 ORTHO05D005427 2.0e-118 429.9 377 62.1
Duzib248G0466 Durio zibethinus HOM05D004432 ORTHO05D005427 3.5e-118 429.1 402 62.7
FvH4_3g12940 Fragaria vesca HOM05D004432 ORTHO05D005427 5.9e-118 428.3 377 62.9
RcHm_v2.0_Chr5g0021051 Rosa chinensis HOM05D004432 ORTHO05D005427 5.9e-118 428.3 377 62.6
FAN21G3105 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.7e-117 426.8 377 62.6
TAR624G0396 Trochodendron aralioides HOM05D004432 ORTHO05D005427 2.3e-117 426.4 377 62.1
FAN25G3492 Fragaria x ananassa HOM05D004432 ORTHO05D005427 2.9e-117 426.0 377 62.6
MD10G1227600 Malus domestica HOM05D004432 ORTHO05D005427 2.9e-117 426.0 377 62.1
Solyc02g081620.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 5.0e-117 425.2 377 65.5
CsaV3_6G052770 Cucumis sativus L. HOM05D004432 ORTHO05D005427 1.1e-116 424.1 377 62.1
PSO541G2602 Papaver somniferum HOM05D004432 ORTHO05D005427 3.3e-116 422.5 383 61.6
Actinidia33704 Actinidia chinensis HOM05D004432 ORTHO05D005427 1.2e-115 420.6 354 65.3
CAN.G809.71 Capsicum annuum HOM05D004432 ORTHO05D005427 1.6e-115 420.2 388 66.2
Prupe.4G117400 Prunus persica HOM05D004432 ORTHO05D005427 1.6e-115 420.2 383 66.6
Ciclev10015448m.g Citrus clementina HOM05D004432 ORTHO05D005427 2.8e-115 419.5 355 62.5
Cc09_g05240 Coffea canephora HOM05D004432 ORTHO05D005427 1.0e-114 417.5 355 61.7
Migut.M02008 Erythranthe guttata HOM05D004432 ORTHO05D005427 2.3e-114 416.4 378 68.3
Peaxi162Scf00048g01413 Petunia axillaris HOM05D004432 ORTHO05D005427 1.2e-113 414.1 377 66.0
Nn7g38330 Nelumbo nucifera HOM05D004432 ORTHO05D005427 1.5e-113 413.7 355 70.7
Sed0004537 Sechium edule HOM05D004432 ORTHO05D005427 3.4e-113 412.5 377 60.2
SGA_v2.0_scaffold298G47706 Striga asiatica HOM05D004432 ORTHO05D005427 2.9e-112 409.5 380 68.9
CiPaw.10G104800 Carya illinoinensis HOM05D004432 ORTHO05D005427 4.9e-112 408.7 355 61.4
TWI63G0296 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 6.4e-112 408.3 377 61.8
Atru.chr8.662 Acer truncatum HOM05D004432 ORTHO05D005427 8.3e-112 407.9 355 60.8
Lalb_Chr05g0222011 Lupinus albus HOM05D004432 ORTHO05D005427 8.3e-112 407.9 389 67.6
Eucgr.E04313 Eucalyptus grandis HOM05D004432 ORTHO05D005427 1.8e-111 406.8 374 69.5
CSS0046356 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 4.1e-111 405.6 400 59.2
Phvul.002G325100 Phaseolus vulgaris HOM05D004432 ORTHO05D005427 4.1e-111 405.6 378 61.6
Nitab4.5_0010401g0010 Nicotiana tabacum HOM05D004432 ORTHO05D005427 7.0e-111 404.8 353 65.7
Nitab4.5_0006794g0040 Nicotiana tabacum HOM05D004432 ORTHO05D005427 9.2e-111 404.4 353 65.4
Sabra03G0044900 Salix brachista HOM05D004432 ORTHO05D005427 2.7e-110 402.9 384 62.8
VMungo0251G3730 Vigna mungo HOM05D004432 ORTHO05D005427 2.7e-110 402.9 378 73.3
TWI15G0381 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 6.0e-110 401.7 375 61.6
CANSAT35G1493 Cannabis sativa HOM05D004432 ORTHO05D005427 1.3e-109 400.6 376 61.2
PGR042G3514 Punica granatum HOM05D004432 ORTHO05D005427 1.3e-109 400.6 377 58.6
Actinidia22430 Actinidia chinensis HOM05D004432 ORTHO05D005427 3.9e-109 399.1 351 67.2
Medtr8g106220 Medicago truncatula HOM05D004432 ORTHO05D005427 5.0e-109 398.7 357 72.3
Glyma.05G241800 Glycine max HOM05D004432 ORTHO05D005427 6.6e-109 398.3 378 67.7
Psat7g005440 Pisum sativum HOM05D004432 ORTHO05D005427 6.6e-109 398.3 361 69.3
ClCG01G025530 Citrullus lanatus HOM05D004432 ORTHO05D005427 1.1e-108 397.5 424 55.0
Gorai.008G050900 Gossypium raimondii HOM05D004432 ORTHO05D005427 3.3e-108 396.0 350 63.7
Aqoxy1G01396 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 5.6e-108 395.2 355 69.6
Sopen02g010370 Solanum pennellii HOM05D004432 ORTHO05D005427 7.3e-108 394.8 374 68.7
Peaxi162Scf00198g01525 Petunia axillaris HOM05D004432 ORTHO05D005427 1.6e-107 393.7 377 59.9
Oeu056059.4 Olea europaea HOM05D004432 ORTHO05D005427 2.1e-107 393.3 420 57.6
GSVIVG01015880001 Vitis vinifera HOM05D004432 ORTHO05D005427 2.8e-107 392.9 375 59.7
PSO675G3183 Papaver somniferum HOM05D004432 ORTHO05D005427 4.7e-107 392.1 357 60.8
Sopen02g026240 Solanum pennellii HOM05D004432 ORTHO05D005427 4.7e-107 392.1 355 64.2
ECA232G3357 Erigeron canadensis HOM05D004432 ORTHO05D005427 8.0e-107 391.3 378 60.3
Solyc02g032120.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 1.8e-106 390.2 374 68.2
Duzib132G0752 Durio zibethinus HOM05D004432 ORTHO05D005427 2.3e-106 389.8 352 62.8
FAN11G2748 Fragaria x ananassa HOM05D004432 ORTHO05D005427 4.0e-106 389.0 355 60.3
TWI34G0639 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 8.9e-106 387.9 390 57.4
MELO3C007033.2 Cucumis melo HOM05D004432 ORTHO05D005427 1.5e-105 387.1 355 60.0
Oeu018409.2 Olea europaea HOM05D004432 ORTHO05D005427 3.4e-105 386.0 427 60.2
SGA_v2.0_scaffold175G39329 Striga asiatica HOM05D004432 ORTHO05D005427 1.3e-104 384.0 442 53.8
Ca_17239_v3 Cicer arietinum L. HOM05D004432 ORTHO05D005427 2.4e-103 379.8 365 69.3
DCAR_003760 Daucus carota HOM05D004432 ORTHO05D005427 1.2e-102 377.5 358 60.6
Glyma.08G049300 Glycine max HOM05D004432 ORTHO05D005427 1.2e-102 377.5 363 62.5
HanXRQChr09g0257831 Helianthus annuus HOM05D004432 ORTHO05D005427 2.7e-102 376.3 374 61.2
Lsat_1_v5_gn_8_106840 Lactuca sativa HOM05D004432 ORTHO05D005427 3.5e-102 375.9 368 60.1
arahy.Tifrunner.gnm1.ann1.AGE02H Arachis hypogaea HOM05D004432 ORTHO05D005427 1.9e-100 370.2 378 63.2
unitig_748.g7489 Utricularia gibba HOM05D004432 ORTHO05D005427 3.3e-100 369.4 380 58.2
Carub.0001s2938 Capsella rubella HOM05D004432 ORTHO05D005427 4.3e-100 369.0 376 56.4
Potri.001G160700 Populus trichocarpa HOM05D004432 ORTHO05D005427 4.3e-100 369.0 352 58.8
arahy.Tifrunner.gnm1.ann1.GLQ3B3 Arachis hypogaea HOM05D004432 ORTHO05D005427 9.5e-100 367.9 378 63.0
Lalb_Chr10g0095541 Lupinus albus HOM05D004432 ORTHO05D005427 2.1e-99 366.7 385 67.5
TWI15G1036 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 2.1e-99 366.7 369 56.1
BcaB07g32757 Brassica carinata HOM05D004432 ORTHO05D005427 2.3e-98 363.2 378 58.2
Cpa.g.sc30.114 Carica papaya HOM05D004432 ORTHO05D005427 2.3e-98 363.2 352 60.5
AT1G30970 Arabidopsis thaliana HOM05D004432 ORTHO05D005427 2.6e-97 359.8 379 55.7
EL10Ac6g15345 Beta vulgaris HOM05D004432 ORTHO05D005427 7.5e-97 358.2 378 65.3
MSTRG.16369 Avicennia marina HOM05D004432 ORTHO05D005427 9.9e-97 357.8 357 65.5
AUR62017849 Chenopodium quinoa HOM05D004432 ORTHO05D005427 1.9e-95 353.6 414 58.5
Lalb_Chr09g0330711 Lupinus albus HOM05D004432 ORTHO05D005427 1.9e-95 353.6 356 70.5
BcaB04g18194 Brassica carinata HOM05D004432 ORTHO05D005427 5.4e-95 352.1 376 56.4
Sabra01G0131600 Salix brachista HOM05D004432 ORTHO05D005427 7.1e-95 351.7 392 59.9
AL1G45380 Arabidopsis lyrata HOM05D004432 ORTHO05D005427 1.6e-94 350.5 355 55.8
BraA09t39051Z Brassica rapa HOM05D004432 ORTHO05D005427 3.5e-94 349.4 375 63.5
Thhalv10008022m.g Eutrema salsugineum HOM05D004432 ORTHO05D005427 7.8e-94 348.2 376 58.0
Sc16g0004480 Simmondsia chinensis HOM05D004432 ORTHO05D005427 7.8e-94 348.2 368 64.4
Lj4g0008002 Lotus japonicus HOM05D004432 ORTHO05D005427 1.7e-93 347.1 362 64.4
Aa31LG6G12370 Aethionema arabicum HOM05D004432 ORTHO05D005427 6.6e-93 345.1 357 56.0
BolC5t31752H Brassica oleracea HOM05D004432 ORTHO05D005427 6.6e-93 345.1 375 63.5
BcaC05g27130 Brassica carinata HOM05D004432 ORTHO05D005427 3.3e-92 342.8 374 64.7
C05p30150 Brassica napus HOM05D004432 ORTHO05D005427 3.3e-92 342.8 374 64.7
AUR62003535 Chenopodium quinoa HOM05D004432 ORTHO05D005427 5.2e-90 335.5 353 62.3
ATR0568G227 Amborella trichopoda HOM05D004432 ORTHO05D005427 6.8e-90 335.1 388 55.9
THA.LOC104798567 Tarenaya hassleriana HOM05D004432 ORTHO05D005427 3.4e-89 332.8 355 58.3
BcaC07g37789 Brassica carinata HOM05D004432 ORTHO05D005427 5.8e-89 332.0 373 54.7
Sp1g26830 Schrenkiella parvula HOM05D004432 ORTHO05D005427 3.8e-88 329.3 355 57.2
A09p35240 Brassica napus HOM05D004432 ORTHO05D005427 3.0e-85 319.7 354 63.3
HPP92_006155 Vanilla planifolia HOM05D004432 ORTHO05D005427 5.6e-84 315.5 364 51.9
Cfa001128 Carpinus fangiana HOM05D004432 ORTHO05D005427 7.3e-84 315.1 326 58.6
A08p10850 Brassica napus HOM05D004432 ORTHO05D005427 3.6e-83 312.8 355 52.7
Hund04373 Selenicereus undatus HOM05D004432 ORTHO05D005427 6.2e-83 312.0 502 47.8
HPP92_024334 Vanilla planifolia HOM05D004432 ORTHO05D005427 6.2e-83 312.0 354 52.0
SEGI_00495 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 2.4e-82 310.1 390 58.5
Os09g0560900 Oryza sativa ssp. japonica HOM05D004432 ORTHO05D005427 1.3e-80 304.3 380 50.0
BolC8t48181H Brassica oleracea HOM05D004432 ORTHO05D005427 1.4e-79 300.8 352 52.8
Mapoly0070s0095 Marchantia polymorpha HOM05D004432 ORTHO05D005427 3.5e-78 296.2 396 53.3
BraA08t33081Z Brassica rapa HOM05D004432 ORTHO05D005427 5.1e-77 292.4 352 51.4
vmacro03556 Vaccinium macrocarpon HOM05D004432 ORTHO05D005427 1.9e-76 290.4 480 45.4
QL11p012272 Quercus lobata HOM05D004432 ORTHO05D005427 1.6e-75 287.3 282 58.9
TWI32G0924 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 2.8e-75 286.6 315 54.6
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 3.6e-75 286.2 327 52.9
Ah.03g147620 Amaranthus hybridus HOM05D004432 ORTHO05D005427 1.2e-70 271.2 338 53.3
Potri.003G074200 Populus trichocarpa HOM05D004432 ORTHO05D005427 1.6e-70 270.8 162 79.6
TAR629G1033 Trochodendron aralioides HOM05D004432 ORTHO05D005427 1.6e-70 270.8 283 60.1
Pp3c22_1400 Physcomitrium patens HOM05D004432 ORTHO05D005427 3.5e-70 269.6 404 56.4
CiPaw.09G137500 Carya illinoinensis HOM05D004432 ORTHO05D005427 6.0e-70 268.9 163 78.5
AagrBONN_evm.TU.Sc2ySwM_344.4234 Anthoceros agrestis HOM05D004432 ORTHO05D005427 2.5e-68 263.5 404 47.3
SEGI_03989 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 4.9e-56 222.6 161 70.2
SMO239G0124 Selaginella moellendorffii HOM05D004432 ORTHO05D005427 6.5e-56 222.2 383 40.5
Rhsim13G0133800 Rhododendron simsii HOM05D004432 ORTHO05D005427 5.5e-55 219.2 303 51.8
RhsimUnG0176800 Rhododendron simsii HOM05D004432 ORTHO05D005427 5.5e-55 219.2 303 51.8
Haze_05275 Corylus avellana HOM05D004432 ORTHO05D005427 9.3e-55 218.4 271 57.6
CiPaw.09G137600 Carya illinoinensis HOM05D004432 ORTHO05D005427 1.8e-50 204.1 149 75.2
Haze_05262 Corylus avellana HOM05D004432 ORTHO05D005427 3.1e-50 203.4 98 93.9
Dinv23013 Davidia involucrata HOM05D004432 ORTHO05D005427 8.5e-48 195.3 249 49.0
Rhsim13G0133700 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.4e-47 194.5 99 90.9
RhsimUnG0176700 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.4e-47 194.5 99 90.9
CBR_g1074 Chara braunii HOM05D004432 ORTHO05D005427 7.9e-46 188.7 130 68.5
Dinv23014 Davidia involucrata HOM05D004432 ORTHO05D005427 1.8e-42 177.6 93 92.5
Zm00001eb104750 Zea mays HOM05D004432 ORTHO05D005427 1.4e-39 167.9 314 42.7
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 1.3e-35 154.8 689 27.4
Dinv01000 Davidia involucrata HOM05D004432 ORTHO05D005427 1.1e-34 151.8 182 59.9
SEGI_09071 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 3.4e-33 146.7 98 77.6
Nitab4.5_0004903g0050 Nicotiana tabacum HOM05D004432 ORTHO05D005427 2.1e-30 137.5 230 47.8
Sopen12g027920 Solanum pennellii HOM05D004432 ORTHO05D005427 6.7e-29 132.5 71 84.5
Atru.chr10.360 Acer truncatum HOM05D004432 ORTHO05D005427 7.4e-28 129.0 131 58.0
Pp3c19_17160 Physcomitrium patens HOM05D004432 ORTHO05D005427 4.8e-27 126.3 84 76.2
CARHR030510 Cardamine hirsuta HOM05D004432 ORTHO05D005427 9.1e-26 122.1 124 61.3
Aqoxy1G01395 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 2.9e-24 117.1 366 30.3
MCO08G042 Micromonas commoda HOM05D004432 ORTHO05D005427 1.1e-23 115.2 147 48.3
Cre06.g305200 Chlamydomonas reinhardtii HOM05D004432 ORTHO05D005427 2.5e-23 114.0 94 54.3
GSVIVG01015874001 Vitis vinifera HOM05D004432 ORTHO05D005427 7.2e-23 112.5 65 83.1
Cfa025961 Carpinus fangiana HOM05D004432 ORTHO05D005427 9.4e-23 112.1 83 56.6
CAN.G958.2 Capsicum annuum HOM05D004432 ORTHO05D005427 2.8e-19 100.5 76 64.5
Lj1g0003853 Lotus japonicus HOM05D004432 ORTHO05D005427 2.0e-12 77.8 62 58.1
Psat7g229080 Pisum sativum HOM05D004432 ORTHO05D005427 1.7e-08 64.7 74 47.3


User provided reference genes

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