Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 3.3e-107 391.7 200 100.0
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 3.8e-63 245.4 210 68.1
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.0e-60 237.3 210 66.7
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 3.7e-58 228.8 206 65.5
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 8.2e-58 227.6 211 65.4
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 4.5e-56 221.9 215 64.7
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 3.8e-55 218.8 211 60.2
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 8.5e-55 217.6 213 61.5
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 2.5e-54 216.1 212 60.8
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 7.2e-54 214.5 210 63.3
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.2e-53 213.8 212 63.2
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 1.6e-53 213.4 206 63.1
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 1.4e-52 210.3 207 60.4
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 2.3e-52 209.5 210 59.0
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 1.2e-51 207.2 210 56.7
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 5.7e-51 204.9 208 59.1
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 7.5e-51 204.5 210 56.7
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 2.8e-50 202.6 207 58.0
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 2.8e-50 202.6 210 59.0
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 6.3e-50 201.4 206 59.2
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 8.3e-50 201.1 213 57.3
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 1.8e-49 199.9 212 58.0
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.8e-49 199.9 209 56.5
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 3.1e-49 199.1 212 57.1
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 4.1e-49 198.7 209 56.9
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.4e-49 198.4 216 56.5
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 9.1e-49 197.6 214 57.9
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 9.1e-49 197.6 216 56.0
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 9.1e-49 197.6 216 56.0
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 2.0e-48 196.4 216 56.9
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 2.7e-48 196.1 220 57.3
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 3.5e-48 195.7 214 60.7
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 7.7e-48 194.5 209 57.9
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 1.3e-47 193.7 216 56.9
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 2.9e-47 192.6 213 56.3
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 6.5e-47 191.4 213 56.8
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.9e-46 189.9 215 58.6
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 3.3e-46 189.1 213 54.0
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 1.6e-45 186.8 211 53.6
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 2.1e-45 186.4 212 56.6
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 6.1e-45 184.9 216 56.0
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 6.1e-45 184.9 204 54.4
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 1.8e-44 183.3 216 52.3
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 5.2e-44 181.8 216 55.1
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 1.2e-43 180.6 212 53.3
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 1.5e-43 180.3 213 53.1
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 3.4e-43 179.1 207 53.6
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 5.7e-43 178.3 220 53.2
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 2.8e-42 176.0 199 52.3
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 3.7e-42 175.6 195 54.4
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 3.7e-42 175.6 196 55.6
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 6.3e-42 174.9 190 56.3
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 8.3e-42 174.5 210 54.3
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 1.8e-41 173.3 194 55.2
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 1.8e-41 173.3 210 54.3
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.4e-41 172.9 195 53.8
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 2.4e-41 172.9 215 54.4
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 3.1e-41 172.6 216 52.3
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 9.2e-41 171.0 190 55.8
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 4.5e-40 168.7 190 55.3
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 2.5e-38 162.9 188 55.9
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 9.5e-38 161.0 208 50.5
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 1.4e-36 157.1 207 48.8
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 5.2e-36 155.2 209 53.1
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 8.9e-36 154.5 189 52.9
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 1.5e-35 153.7 218 50.0
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 1.5e-35 153.7 218 51.4
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 7.5e-35 151.4 146 60.3
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 1.3e-34 150.6 203 51.2
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 1.8e-33 146.7 210 49.0
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 2.4e-33 146.4 227 48.9
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 7.0e-33 144.8 200 49.0
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 7.0e-33 144.8 211 48.3
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 2.0e-32 143.3 182 52.7
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 2.7e-32 142.9 214 46.3
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 6.0e-32 141.7 201 47.8
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 6.0e-32 141.7 186 51.6
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 1.3e-31 140.6 201 47.8
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 3.0e-31 139.4 209 48.8
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 3.3e-30 136.0 205 49.8
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 4.3e-30 135.6 208 46.2
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 4.3e-30 135.6 213 47.9
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 5.6e-30 135.2 207 49.3
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 1.1e-28 131.0 183 49.2
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 8.9e-28 127.9 204 44.6
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 1.5e-27 127.1 246 42.3
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 2.0e-27 126.7 213 47.9
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 4.4e-27 125.6 167 51.5
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.3e-26 124.0 207 43.0
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 1.7e-26 123.6 192 49.0
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 3.7e-26 122.5 219 41.6
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 6.4e-26 121.7 194 44.3
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 6.4e-26 121.7 194 44.3
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 1.1e-25 120.9 214 42.1
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 1.9e-25 120.2 207 42.0
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 2.4e-25 119.8 197 45.7
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 3.2e-25 119.4 223 42.6
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 4.1e-25 119.0 220 43.2
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 4.1e-25 119.0 124 57.3
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 9.2e-25 117.9 213 45.5
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.0e-24 116.7 195 44.1
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 1.0e-23 114.4 216 42.1
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.7e-23 113.6 209 43.1
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 2.3e-23 113.2 178 44.9
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 3.0e-23 112.8 196 44.4
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 3.0e-23 112.8 196 44.4
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 3.0e-23 112.8 196 44.4
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 6.6e-23 111.7 197 44.7
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 1.1e-22 110.9 210 41.0
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 1.2e-21 107.5 200 43.5
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 2.1e-21 106.7 208 39.9
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 3.6e-21 105.9 199 43.2
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 4.7e-21 105.5 199 43.2
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 2.6e-19 99.8 186 40.9
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 4.4e-19 99.0 79 64.6
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 2.2e-18 96.7 207 40.6
Duzib128G0429 Durio zibethinus HOM05D005571 ORTHO05D006919 2.9e-18 96.3 102 52.9
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 2.4e-17 93.2 177 36.2
Gohir.A02G084300 Gossypium hirsutum HOM05D005571 ORTHO05D006919 5.4e-17 92.0 133 44.4
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 2.5e-14 83.2 108 54.6
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 4.3e-14 82.4 171 38.6
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 1.6e-13 80.5 160 39.4
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 3.6e-13 79.3 191 39.8
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 6.2e-13 78.6 190 38.9
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 4.0e-12 75.9 176 41.5
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 4.0e-12 75.9 176 41.5
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 4.0e-12 75.9 176 41.5
Sabra11G0115000 Salix brachista HOM05D005571 ORTHO05D006919 6.8e-12 75.1 71 57.7
Sabra11G0115600 Salix brachista HOM05D005571 ORTHO05D006919 6.8e-12 75.1 71 57.7
Os07g0474300 Oryza sativa ssp. japonica HOM05D033341 ORTHO05D036979 3.4e-11 72.8 227 35.7
BraA10t44107Z Brassica rapa HOM05D005571 ORTHO05D006919 2.2e-10 70.1 146 39.7
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 2.9e-10 69.7 191 33.5
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 6.0e-08 62.0 97 47.4
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 6.0e-08 62.0 97 47.4
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 7.8e-08 61.6 97 46.4
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 7.8e-08 61.6 97 46.4
ECA238G3056 Erigeron canadensis HOM05D002204 ORTHO05D002875 3.9e-07 59.3 116 37.9


User provided reference genes

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