Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05467 Davidia involucrata HOM05D007209 ORTHO05D000921 1.4e-125 453.0 224 100.0
Dinv01169 Davidia involucrata HOM05D007209 ORTHO05D000921 4.4e-84 315.1 168 93.5
Dinv20825 Davidia involucrata HOM05D007209 ORTHO05D000921 5.2e-77 291.6 183 79.8
Dinv32776 Davidia involucrata HOM05D007209 ORTHO05D000921 5.8e-76 288.1 183 79.8
Dinv27628 Davidia involucrata HOM05D007209 ORTHO05D000921 3.9e-56 222.2 116 94.0
Dinv13268 Davidia involucrata HOM05D000097 ORTHO05D000041 2.8e-54 216.1 145 75.2
Dinv23928 Davidia involucrata HOM05D007209 ORTHO05D000921 4.8e-46 188.7 111 82.9
Hma1.2p1_0805F.1_g221293 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 2.5e-31 139.8 168 48.8
Hma1.2p1_0805F.1_g221299 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 2.5e-31 139.8 168 48.8
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.1e-26 124.4 175 39.4
Hma1.2p1_0309F.1_g120595 Hydrangea macrophylla HOM05D007209 ORTHO05D000921 3.5e-25 119.4 162 45.7
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.9e-15 87.0 165 32.1
Rhsim03G0129100 Rhododendron simsii HOM05D007209 ORTHO05D000921 9.7e-15 84.7 164 34.8
TAR597G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 3.7e-14 82.8 170 31.8
MELO3C030897.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.8e-14 82.4 171 34.5
TAR599G0002 Trochodendron aralioides HOM05D007209 ORTHO05D000921 4.8e-14 82.4 170 32.9
AUR62040593 Chenopodium quinoa HOM05D007209 ORTHO05D000921 1.4e-13 80.9 168 28.6
vmacro18043 Vaccinium macrocarpon HOM05D007209 ORTHO05D000005 1.8e-13 80.5 118 38.1
Rhsim03G0151700 Rhododendron simsii HOM05D000114 ORTHO05D000037 2.6e-12 76.6 168 32.1
MELO3C028998.2 Cucumis melo HOM05D007209 ORTHO05D000921 7.7e-12 75.1 171 33.3
vmacro05171 Vaccinium macrocarpon HOM05D004340 ORTHO05D006363 7.7e-12 75.1 183 31.1
AUR62024947 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.2e-11 73.6 123 29.3
MELO3C034280.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.2e-11 73.6 168 30.4
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 2.2e-11 73.6 159 30.2
EL10Ac2g04750 Beta vulgaris HOM05D000665 ORTHO05D000921 2.9e-11 73.2 81 44.4
ClCG03G008640 Citrullus lanatus HOM05D007209 ORTHO05D000921 2.9e-11 73.2 202 28.2
MELO3C033912.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.9e-11 73.2 115 37.4
MELO3C031338.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.8e-11 72.8 171 32.2
MELO3C035563.2 Cucumis melo HOM05D007209 ORTHO05D000921 3.8e-11 72.8 115 35.7
Actinidia24178 Actinidia chinensis HOM05D013777 ORTHO05D000921 2.5e-10 70.1 169 29.0
Lj1g0016199 Lotus japonicus HOM05D007209 ORTHO05D000921 3.2e-10 69.7 166 27.1
Hund13763 Selenicereus undatus HOM05D000665 ORTHO05D000921 3.2e-10 69.7 143 32.9
AUR62012087 Chenopodium quinoa HOM05D000665 ORTHO05D000921 5.5e-10 68.9 81 42.0
AUR62037673 Chenopodium quinoa HOM05D007209 ORTHO05D000921 5.5e-10 68.9 106 33.0
ClCG07G007780 Citrullus lanatus HOM05D007209 ORTHO05D000921 7.2e-10 68.6 169 33.1
MELO3C029648.2 Cucumis melo HOM05D007209 ORTHO05D000921 9.4e-10 68.2 170 32.4
COL.COLO4_05628 Corchorus olitorius HOM05D007209 ORTHO05D000921 2.1e-09 67.0 170 30.6
Glyma.15G120200 Glycine max HOM05D007209 ORTHO05D000921 2.1e-09 67.0 175 28.0
Rhsim12G0122900 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.1e-09 67.0 189 28.6
AUR62037953 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.7e-09 66.6 168 28.6
Rhsim04G0134000 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.7e-09 66.6 169 30.2
Sed0003641 Sechium edule HOM05D000034 ORTHO05D000037 2.7e-09 66.6 92 37.0
LjContig00141g0014815 Lotus japonicus HOM05D007209 ORTHO05D000921 3.6e-09 66.2 167 26.3
Lj2g0013227 Lotus japonicus HOM05D007209 ORTHO05D000921 6.1e-09 65.5 167 25.7
MELO3C035609.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.0e-08 64.7 116 32.8
Potri.018G112701 Populus trichocarpa HOM05D007209 ORTHO05D000921 1.0e-08 64.7 123 35.8
ClCG03G011480 Citrullus lanatus HOM05D007209 ORTHO05D000921 1.4e-08 64.3 167 32.3
COL.COLO4_25265 Corchorus olitorius HOM05D007209 ORTHO05D000921 1.4e-08 64.3 174 27.0
MELO3C030185.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.8e-08 63.9 151 31.1
COL.COLO4_35876 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.9e-08 62.8 170 28.2
ClCG09G017130 Citrullus lanatus HOM05D007209 ORTHO05D000921 8.8e-08 61.6 117 31.6
COL.COLO4_33426 Corchorus olitorius HOM05D007209 ORTHO05D000921 8.8e-08 61.6 170 27.6
MD17G1072500 Malus domestica HOM05D000005 ORTHO05D000012 8.8e-08 61.6 68 44.1
MELO3C032092.2 Cucumis melo HOM05D007209 ORTHO05D000921 1.1e-07 61.2 148 31.8
CsaV3_3G041440 Cucumis sativus L. HOM05D007209 ORTHO05D000921 1.1e-07 61.2 164 31.7
ClCG10G015090 Citrullus lanatus HOM05D007209 ORTHO05D000921 2.0e-07 60.5 160 30.0
MELO3C009866.2 Cucumis melo HOM05D007209 ORTHO05D000921 2.6e-07 60.1 164 30.5
COL.COLO4_20107 Corchorus olitorius HOM05D007209 ORTHO05D000921 3.3e-07 59.7 182 28.0
FAN10G0934 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.3e-07 59.7 92 31.5
MELO3C030714.2 Cucumis melo HOM05D007209 ORTHO05D000921 4.4e-07 59.3 156 31.4
FvH4_7g09790 Fragaria vesca HOM05D009879 ORTHO05D009647 5.7e-07 58.9 92 31.5
FAN03G0178 Fragaria x ananassa HOM05D009879 ORTHO05D009647 5.7e-07 58.9 92 31.5
EL10Ac6g14408 Beta vulgaris HOM05D007209 ORTHO05D000921 7.4e-07 58.5 83 33.7
CANSAT54G0727 Cannabis sativa HOM05D007209 ORTHO05D000921 1.3e-06 57.8 164 25.6
RcHm_v2.0_Chr1g0346821 Rosa chinensis HOM05D009879 ORTHO05D009647 1.3e-06 57.8 92 37.0
RcHm_v2.0_Chr1g0346841 Rosa chinensis HOM05D009879 ORTHO05D009647 1.3e-06 57.8 92 37.0
Actinidia05403 Actinidia chinensis HOM05D013777 ORTHO05D000921 1.7e-06 57.4 165 27.9
CANSAT01G1814 Cannabis sativa HOM05D007209 ORTHO05D000921 1.7e-06 57.4 165 24.8
AUR62042144 Chenopodium quinoa HOM05D007209 ORTHO05D000921 2.2e-06 57.0 54 42.6
Sed0011521 Sechium edule HOM05D007209 ORTHO05D000921 3.7e-06 56.2 164 30.5
Sed0016419 Sechium edule HOM05D007209 ORTHO05D000921 3.7e-06 56.2 59 42.4
TWI09G1054 Tripterygium wilfordii HOM05D000015 ORTHO05D002445 4.8e-06 55.8 97 30.9
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 6.3e-06 55.5 177 27.1
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 6.3e-06 55.5 177 27.1
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 6.3e-06 55.5 177 27.1
FAN06G0059 Fragaria x ananassa HOM05D009879 ORTHO05D009647 6.3e-06 55.5 126 24.6


User provided reference genes

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