Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv05464 Davidia involucrata HOM05D001418 ORTHO05D002038 6.6e-57 223.8 111 100.0
Dinv25763 Davidia involucrata HOM05D001418 ORTHO05D002038 5.8e-29 131.0 86 79.1
CSS0026376 Camellia sinensis var. sinensis HOM05D001418 ORTHO05D002038 1.0e-25 120.2 88 73.9
CSS0031979 Camellia sinensis var. sinensis HOM05D001418 ORTHO05D002038 1.0e-25 120.2 88 73.9
Hma1.2p1_0102F.1_g049780 Hydrangea macrophylla HOM05D001418 ORTHO05D002038 2.0e-21 105.9 86 65.1
MBI15_g27183_MAGBIO Magnolia biondii HOM05D001418 ORTHO05D002038 7.1e-19 97.4 110 53.6
GSVIVG01035980001 Vitis vinifera HOM05D001418 ORTHO05D002038 9.3e-19 97.1 97 56.7
Dinv08083 Davidia involucrata HOM05D014946 ORTHO05D182178 1.2e-18 96.7 55 85.5
MELO3C016952.2 Cucumis melo HOM05D001418 ORTHO05D002038 2.7e-18 95.5 93 58.1
CsaV3_4G036460 Cucumis sativus L. HOM05D001418 ORTHO05D002038 2.7e-18 95.5 93 58.1
ClCG05G016210 Citrullus lanatus HOM05D001418 ORTHO05D002038 1.0e-17 93.6 90 58.9
Aqoxy7G03363 Aquilegia oxysepala HOM05D001418 ORTHO05D002038 8.7e-17 90.5 103 52.4
TAR636G2883 Trochodendron aralioides HOM05D001418 ORTHO05D002038 1.5e-16 89.7 98 57.1
Dinv42837 Davidia involucrata HOM05D001418 ORTHO05D002038 1.9e-16 89.4 110 50.0
Dinv43262 Davidia involucrata HOM05D001418 ORTHO05D002038 1.9e-16 89.4 110 50.0
Migut.J01373 Erythranthe guttata HOM05D001418 ORTHO05D002038 1.6e-15 86.3 98 53.1
Sed0002231 Sechium edule HOM05D001418 ORTHO05D002038 1.6e-15 86.3 84 59.5
CSS0043344 Camellia sinensis var. sinensis HOM05D001418 ORTHO05D002038 2.2e-15 85.9 112 46.4
vmacro06061 Vaccinium macrocarpon HOM05D001418 ORTHO05D002038 2.2e-15 85.9 105 50.5
Potri.006G265300 Populus trichocarpa HOM05D001418 ORTHO05D002038 4.8e-15 84.7 88 52.3
Dinv41361 Davidia involucrata HOM05D001418 ORTHO05D002038 6.3e-15 84.3 111 50.5
Potri.018G017600 Populus trichocarpa HOM05D001418 ORTHO05D002038 1.1e-14 83.6 90 55.6
Lj9A719G54 Lonicera japonica HOM05D001418 ORTHO05D002038 2.4e-14 82.4 105 48.6
QL02p018712 Quercus lobata HOM05D001418 ORTHO05D002038 2.4e-14 82.4 90 55.6
Sed0026059 Sechium edule HOM05D001418 ORTHO05D002038 2.4e-14 82.4 89 56.2
Prupe.1G395100 Prunus persica HOM05D001418 ORTHO05D002038 5.3e-14 81.3 89 53.9
Glyma.04G154100 Glycine max HOM05D001418 ORTHO05D002038 6.9e-14 80.9 87 55.2
COL.COLO4_18960 Corchorus olitorius HOM05D001418 ORTHO05D002038 9.0e-14 80.5 89 51.7
Rhsim01G0027600 Rhododendron simsii HOM05D001418 ORTHO05D002038 9.0e-14 80.5 105 45.7
Sabra18G0020900 Salix brachista HOM05D001418 ORTHO05D002038 9.0e-14 80.5 90 53.3
Actinidia23562 Actinidia chinensis HOM05D001418 ORTHO05D002038 1.2e-13 80.1 103 49.5
Atru.chr7.2555 Acer truncatum HOM05D001418 ORTHO05D002038 2.0e-13 79.3 96 51.0
Sabra06G0207900 Salix brachista HOM05D001418 ORTHO05D002038 2.0e-13 79.3 88 48.9
Hund26112 Selenicereus undatus HOM05D001418 ORTHO05D002038 2.0e-13 79.3 95 48.4
Duzib150G1143 Durio zibethinus HOM05D001418 ORTHO05D002038 2.6e-13 79.0 110 45.5
Nn8g39967 Nelumbo nucifera HOM05D001418 ORTHO05D002038 2.6e-13 79.0 110 50.9
Glyma.06G225700 Glycine max HOM05D001418 ORTHO05D002038 3.4e-13 78.6 88 55.7
Actinidia38314 Actinidia chinensis HOM05D001418 ORTHO05D002038 4.5e-13 78.2 104 49.0
CiPaw.16G107800 Carya illinoinensis HOM05D001418 ORTHO05D002038 4.5e-13 78.2 109 45.9
Nitab4.5_0010207g0020 Nicotiana tabacum HOM05D001418 ORTHO05D002038 4.5e-13 78.2 93 48.4
CANSAT11G0739 Cannabis sativa HOM05D001418 ORTHO05D002038 7.6e-13 77.4 103 50.5
Peaxi162Scf00401g00035 Petunia axillaris HOM05D001418 ORTHO05D002038 1.0e-12 77.0 88 53.4
Potri.018G104100 Populus trichocarpa HOM05D001418 ORTHO05D002038 1.0e-12 77.0 106 49.1
Hma1.2p1_0028F.1_g017640 Hydrangea macrophylla HOM05D001418 ORTHO05D002038 1.3e-12 76.6 112 47.3
Thecc.09G014800 Theobroma cacao HOM05D001418 ORTHO05D002038 1.3e-12 76.6 93 53.8
TAR383G0277 Trochodendron aralioides HOM05D001418 ORTHO05D002038 1.7e-12 76.3 113 46.0
Lsat_1_v5_gn_7_50141 Lactuca sativa HOM05D001418 ORTHO05D002038 2.2e-12 75.9 108 45.4
Lsat_1_v5_gn_5_89460 Lactuca sativa HOM05D001418 ORTHO05D002038 3.8e-12 75.1 110 44.5
RcHm_v2.0_Chr6g0299311 Rosa chinensis HOM05D001418 ORTHO05D002038 3.8e-12 75.1 91 51.6
SalBow1G1788 Salvia bowleyana HOM05D001418 ORTHO05D002038 3.8e-12 75.1 101 48.5
TAR383G0787 Trochodendron aralioides HOM05D001418 ORTHO05D002038 3.8e-12 75.1 114 46.5
CiPaw.15G166100 Carya illinoinensis HOM05D001418 ORTHO05D002038 5.0e-12 74.7 110 42.7
Cc06_g14730 Coffea canephora HOM05D001418 ORTHO05D002038 5.0e-12 74.7 103 44.7
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 5.0e-12 74.7 93 47.3
Nitab4.5_0008875g0040 Nicotiana tabacum HOM05D001418 ORTHO05D002038 6.5e-12 74.3 92 52.2
PGSC0003DMG400007907 Solanum tuberosum HOM05D001418 ORTHO05D002038 6.5e-12 74.3 98 52.0
DCAR_017915 Daucus carota HOM05D001418 ORTHO05D002038 8.5e-12 73.9 85 45.9
Nn2g12433 Nelumbo nucifera HOM05D001418 ORTHO05D002038 8.5e-12 73.9 110 48.2
PGSC0003DMG400011196 Solanum tuberosum HOM05D001418 ORTHO05D002038 8.5e-12 73.9 95 49.5
GSVIVG01023638001 Vitis vinifera HOM05D001418 ORTHO05D002038 8.5e-12 73.9 117 44.4
FAN28G0485 Fragaria x ananassa HOM05D001418 ORTHO05D002038 1.1e-11 73.6 101 45.5
Lj6g0015739 Lotus japonicus HOM05D001418 ORTHO05D002038 1.1e-11 73.6 90 51.1
Os02g0611500 Oryza sativa ssp. japonica HOM05D001418 ORTHO05D002038 1.1e-11 73.6 91 50.5
Sopen12g004830 Solanum pennellii HOM05D001418 ORTHO05D002038 1.1e-11 73.6 98 52.0
Duzib168G0848 Durio zibethinus HOM05D001418 ORTHO05D002038 1.4e-11 73.2 115 42.6
Potri.006G182100 Populus trichocarpa HOM05D001418 ORTHO05D002038 1.4e-11 73.2 108 47.2
SGA_v2.0_scaffold265G46091 Striga asiatica HOM05D001418 ORTHO05D002038 1.4e-11 73.2 95 43.2
CDE05G2103 Ceratophyllum demersum HOM05D001418 ORTHO05D002038 1.9e-11 72.8 103 48.5
QL02p093790 Quercus lobata HOM05D001418 ORTHO05D002038 1.9e-11 72.8 99 46.5
RcHm_v2.0_Chr2g0085441 Rosa chinensis HOM05D001418 ORTHO05D002038 1.9e-11 72.8 99 45.5
Sc18g0003040 Simmondsia chinensis HOM05D001418 ORTHO05D002038 1.9e-11 72.8 99 49.5
MSTRG.26264 Avicennia marina HOM05D001418 ORTHO05D002038 2.5e-11 72.4 99 50.5
Sabra18G0089500 Salix brachista HOM05D001418 ORTHO05D002038 2.5e-11 72.4 108 46.3
Solyc07g005810.3 Solanum lycopersicum HOM05D001418 ORTHO05D002038 2.5e-11 72.4 95 49.5
Sopen07g001910 Solanum pennellii HOM05D001418 ORTHO05D002038 2.5e-11 72.4 95 49.5
Cfa020805 Carpinus fangiana HOM05D001418 ORTHO05D002038 3.2e-11 72.0 113 40.7
FvH4_1g00720 Fragaria vesca HOM05D001418 ORTHO05D002038 3.2e-11 72.0 101 44.6
FAN23G0062 Fragaria x ananassa HOM05D001418 ORTHO05D002038 3.2e-11 72.0 102 44.1
Manes.06G033200 Manihot esculenta HOM05D001418 ORTHO05D002038 3.2e-11 72.0 107 43.9
Prupe.7G265100 Prunus persica HOM05D001418 ORTHO05D002038 3.2e-11 72.0 104 44.2
Solyc12g009960.2 Solanum lycopersicum HOM05D001418 ORTHO05D002038 3.2e-11 72.0 98 50.0
SGA_v2.0_scaffold45G17021 Striga asiatica HOM05D001418 ORTHO05D002038 3.2e-11 72.0 93 45.2
Nitab4.5_0002891g0080 Nicotiana tabacum HOM05D001418 ORTHO05D002038 4.2e-11 71.6 93 52.7
EL10Ac8g18929 Beta vulgaris HOM05D001418 ORTHO05D002038 5.5e-11 71.2 99 43.4
Duzib187G1251 Durio zibethinus HOM05D001418 ORTHO05D002038 5.5e-11 71.2 111 41.4
Lalb_Chr08g0234261 Lupinus albus HOM05D001418 ORTHO05D002038 5.5e-11 71.2 94 48.9
Migut.K00310 Erythranthe guttata HOM05D001418 ORTHO05D002038 7.2e-11 70.9 98 44.9
MD15G1042000 Malus domestica HOM05D001418 ORTHO05D002038 7.2e-11 70.9 91 49.5
Oeu038136.2 Olea europaea HOM05D001418 ORTHO05D002038 7.2e-11 70.9 94 44.7
PSO782G0621 Papaver somniferum HOM05D001418 ORTHO05D002038 7.2e-11 70.9 100 47.0
Phvul.009G207600 Phaseolus vulgaris HOM05D001418 ORTHO05D002038 7.2e-11 70.9 101 48.5
MSTRG.10704 Avicennia marina HOM05D001418 ORTHO05D002038 9.4e-11 70.5 94 44.7
Gohir.A05G008800 Gossypium hirsutum HOM05D001418 ORTHO05D002038 9.4e-11 70.5 110 41.8
Phvul.003G154900 Phaseolus vulgaris HOM05D001418 ORTHO05D002038 9.4e-11 70.5 112 42.0
ATR0680G013 Amborella trichopoda HOM05D001418 ORTHO05D002038 1.2e-10 70.1 101 42.6
HanXRQChr12g0357731 Helianthus annuus HOM05D001418 ORTHO05D002038 1.2e-10 70.1 103 44.7
Lj4g0017015 Lotus japonicus HOM05D001418 ORTHO05D002038 1.6e-10 69.7 91 47.3
Sp6g19560 Schrenkiella parvula HOM05D001418 ORTHO05D002038 1.6e-10 69.7 109 41.3
Cpa.g.sc46.175 Carica papaya HOM05D001418 ORTHO05D002038 2.1e-10 69.3 115 42.6
Lalb_Chr13g0300751 Lupinus albus HOM05D001418 ORTHO05D002038 2.1e-10 69.3 101 44.6
VMungo1309G2003 Vigna mungo HOM05D001418 ORTHO05D002038 2.1e-10 69.3 91 49.5
CAN.G551.48 Capsicum annuum HOM05D001418 ORTHO05D002038 2.7e-10 68.9 99 47.5
FvH4_2g41200 Fragaria vesca HOM05D001418 ORTHO05D002038 2.7e-10 68.9 90 48.9
VMungo1215G2966 Vigna mungo HOM05D001418 ORTHO05D002038 2.7e-10 68.9 112 42.9
Ah.09g228800 Amaranthus hybridus HOM05D001418 ORTHO05D002038 3.6e-10 68.6 97 46.4
Dinv18461 Davidia involucrata HOM05D001418 ORTHO05D002038 3.6e-10 68.6 56 64.3
TAR626G0066 Trochodendron aralioides HOM05D001418 ORTHO05D002038 3.6e-10 68.6 116 45.7
FAN20G2195 Fragaria x ananassa HOM05D001418 ORTHO05D002038 4.6e-10 68.2 90 47.8
PSO063G5273 Papaver somniferum HOM05D001418 ORTHO05D002038 4.6e-10 68.2 98 44.9
Sabra06G0138900 Salix brachista HOM05D001418 ORTHO05D002038 4.6e-10 68.2 107 45.8
Thecc.09G151300 Theobroma cacao HOM05D001418 ORTHO05D002038 4.6e-10 68.2 113 40.7
Carub.0008s1840 Capsella rubella HOM05D001418 ORTHO05D002038 6.1e-10 67.8 109 40.4
Eucgr.C00248 Eucalyptus grandis HOM05D001418 ORTHO05D002038 6.1e-10 67.8 99 47.5
Thhalv10012738m.g Eutrema salsugineum HOM05D001418 ORTHO05D002038 6.1e-10 67.8 109 39.4
Ah.14g084560 Amaranthus hybridus HOM05D001418 ORTHO05D002038 7.9e-10 67.4 97 43.3
HanXRQChr10g0313681 Helianthus annuus HOM05D001418 ORTHO05D002038 7.9e-10 67.4 108 45.4
Lalb_Chr12g0198771 Lupinus albus HOM05D001418 ORTHO05D002038 7.9e-10 67.4 115 37.4
unitig_0.g560 Utricularia gibba HOM05D001418 ORTHO05D002038 7.9e-10 67.4 96 43.8
Gohir.D03G064800 Gossypium hirsutum HOM05D001418 ORTHO05D002038 1.0e-09 67.0 97 44.3
MD02G1006000 Malus domestica HOM05D001418 ORTHO05D002038 1.0e-09 67.0 106 41.5
Actinidia38665 Actinidia chinensis HOM05D001418 ORTHO05D002038 1.8e-09 66.2 103 42.7
BcaB05g22380 Brassica carinata HOM05D001418 ORTHO05D002038 1.8e-09 66.2 109 38.5
Gohir.A02G105904 Gossypium hirsutum HOM05D001418 ORTHO05D002038 1.8e-09 66.2 97 44.3
TWI63G1644 Tripterygium wilfordii HOM05D001418 ORTHO05D002038 1.8e-09 66.2 111 41.4
MSTRG.10693 Avicennia marina HOM05D001418 ORTHO05D002038 2.3e-09 65.9 97 43.3
A02p08140 Brassica napus HOM05D001418 ORTHO05D002038 2.3e-09 65.9 109 38.5
C02p13790 Brassica napus HOM05D001418 ORTHO05D002038 2.3e-09 65.9 109 38.5
BolC2t07498H Brassica oleracea HOM05D001418 ORTHO05D002038 2.3e-09 65.9 109 38.5
FAN15G2867 Fragaria x ananassa HOM05D001418 ORTHO05D002038 2.3e-09 65.9 90 46.7
FAN27G0335 Fragaria x ananassa HOM05D001418 ORTHO05D002038 2.3e-09 65.9 85 48.2
Rhsim03G0258200 Rhododendron simsii HOM05D001418 ORTHO05D002038 2.3e-09 65.9 150 35.3
Zm00001eb078350 Zea mays HOM05D001418 ORTHO05D002038 2.3e-09 65.9 90 46.7
AL8G33920 Arabidopsis lyrata HOM05D001418 ORTHO05D002038 3.0e-09 65.5 94 42.6
CARHR271610 Cardamine hirsuta HOM05D001418 ORTHO05D002038 3.0e-09 65.5 109 39.4
Gohir.D05G009500 Gossypium hirsutum HOM05D001418 ORTHO05D002038 3.0e-09 65.5 111 39.6
Gorai.009G009800 Gossypium raimondii HOM05D001418 ORTHO05D002038 3.0e-09 65.5 111 39.6
THA.LOC104803546 Tarenaya hassleriana HOM05D001418 ORTHO05D002038 3.0e-09 65.5 105 41.0
Zm00001eb425860 Zea mays HOM05D001418 ORTHO05D002038 3.0e-09 65.5 89 48.3
AT5G57870 Arabidopsis thaliana HOM05D001418 ORTHO05D002038 3.9e-09 65.1 97 42.3
Gorai.013G105700 Gossypium raimondii HOM05D001418 ORTHO05D002038 3.9e-09 65.1 97 43.3
THA.LOC104817820 Tarenaya hassleriana HOM05D001418 ORTHO05D002038 3.9e-09 65.1 109 39.4
Glyma.02G205500 Glycine max HOM05D001418 ORTHO05D002038 5.1e-09 64.7 116 38.8
Glyma.17G072500 Glycine max HOM05D001418 ORTHO05D002038 5.1e-09 64.7 112 40.2
MD15G1150600 Malus domestica HOM05D001418 ORTHO05D002038 5.1e-09 64.7 111 39.6
BraA02t05888Z Brassica rapa HOM05D001418 ORTHO05D002038 6.7e-09 64.3 109 37.6
Gohir.A13G206600 Gossypium hirsutum HOM05D001418 ORTHO05D002038 6.7e-09 64.3 114 37.7
Gohir.D08G256900 Gossypium hirsutum HOM05D001418 ORTHO05D002038 6.7e-09 64.3 99 43.4
Gorai.004G273900 Gossypium raimondii HOM05D001418 ORTHO05D002038 6.7e-09 64.3 99 43.4
Hund08929 Selenicereus undatus HOM05D001418 ORTHO05D002038 6.7e-09 64.3 117 39.3
Gorai.013G241300 Gossypium raimondii HOM05D001418 ORTHO05D002038 8.8e-09 63.9 114 37.7
PGR142G2903 Punica granatum HOM05D001418 ORTHO05D002038 8.8e-09 63.9 117 39.3
arahy.Tifrunner.gnm1.ann1.HA3262 Arachis hypogaea HOM05D001418 ORTHO05D002038 1.1e-08 63.5 106 42.5
arahy.Tifrunner.gnm1.ann1.R0PHQE Arachis hypogaea HOM05D001418 ORTHO05D002038 1.1e-08 63.5 106 42.5
Lalb_Chr07g0179911 Lupinus albus HOM05D001418 ORTHO05D002038 1.1e-08 63.5 107 40.2
ECA234G4214 Erigeron canadensis HOM05D001418 ORTHO05D002038 1.5e-08 63.2 114 39.5
Peaxi162Scf00062g00128 Petunia axillaris HOM05D001418 ORTHO05D002038 1.5e-08 63.2 106 42.5
Gohir.A08G236300 Gossypium hirsutum HOM05D001418 ORTHO05D002038 1.9e-08 62.8 103 41.7
Gohir.D13G211200 Gossypium hirsutum HOM05D001418 ORTHO05D002038 4.3e-08 61.6 114 36.8
MBI14_g09471_MAGBIO Magnolia biondii HOM05D001418 ORTHO05D002038 5.7e-08 61.2 53 58.5
Manes.14G145600 Manihot esculenta HOM05D001418 ORTHO05D002038 5.7e-08 61.2 114 40.4
ClCG06G012550 Citrullus lanatus HOM05D001418 ORTHO05D002038 7.4e-08 60.8 115 39.1
Psat0s3930g0080 Pisum sativum HOM05D001418 ORTHO05D002038 7.4e-08 60.8 112 39.3
CAN.G160.30 Capsicum annuum HOM05D001418 ORTHO05D002038 9.7e-08 60.5 94 42.6
CsaV3_1G029120 Cucumis sativus L. HOM05D001418 ORTHO05D002038 9.7e-08 60.5 118 39.0
TWI34G1132 Tripterygium wilfordii HOM05D001418 ORTHO05D002038 1.3e-07 60.1 114 36.8
MSTRG.26275 Avicennia marina HOM05D001418 ORTHO05D002038 1.7e-07 59.7 97 45.4
Sp7g28590 Schrenkiella parvula HOM05D001418 ORTHO05D002038 2.2e-07 59.3 107 42.1
A03p60240 Brassica napus HOM05D001418 ORTHO05D002038 2.8e-07 58.9 96 41.7
Eucgr.C00247 Eucalyptus grandis HOM05D001418 ORTHO05D002038 2.8e-07 58.9 110 38.2
MELO3C010207.2 Cucumis melo HOM05D001418 ORTHO05D002038 3.7e-07 58.5 116 38.8
THA.LOC104813539 Tarenaya hassleriana HOM05D001418 ORTHO05D002038 3.7e-07 58.5 108 38.9
TPR.G24856 Trifolium pratense HOM05D001418 ORTHO05D002038 3.7e-07 58.5 114 36.8
Lalb_Chr11g0072531 Lupinus albus HOM05D001418 ORTHO05D002038 4.8e-07 58.2 42 66.7
SEGI_23117 Sequoiadendron giganteum HOM05D001418 ORTHO05D002038 4.8e-07 58.2 103 42.7
Atru.chr7.43 Acer truncatum HOM05D001418 ORTHO05D002038 6.3e-07 57.8 122 34.4
Medtr4g130570 Medicago truncatula HOM05D001418 ORTHO05D002038 6.3e-07 57.8 111 36.9
Ca_21145_v3 Cicer arietinum L. HOM05D001418 ORTHO05D002038 1.4e-06 56.6 108 38.0
Ciclev10007494m.g Citrus clementina HOM05D001418 ORTHO05D002038 1.8e-06 56.2 108 38.0
BcaC09g51863 Brassica carinata HOM05D001418 ORTHO05D002038 2.4e-06 55.8 95 45.3
A01p07550 Brassica napus HOM05D001418 ORTHO05D002038 3.1e-06 55.5 96 42.7
CARHR238560 Cardamine hirsuta HOM05D001418 ORTHO05D002038 3.1e-06 55.5 100 41.0
TWI32G0015 Tripterygium wilfordii HOM05D001418 ORTHO05D002038 3.1e-06 55.5 114 35.1
BcaNung02748 Brassica carinata HOM05D001418 ORTHO05D002038 5.3e-06 54.7 99 39.4
C07p58150 Brassica napus HOM05D001418 ORTHO05D002038 5.3e-06 54.7 99 39.4
FAN23G0776 Fragaria x ananassa HOM05D001418 ORTHO05D002038 9.1e-06 53.9 99 37.4


User provided reference genes

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